TCONS_00000539-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000539-protein
Unique NameTCONS_00000539-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1832

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000539-protein ID=TCONS_00000539-protein|Name=TCONS_00000539-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1832bp
MAGVEPQKLIVYNKHLPYSIKKEAERQLSEIKYNLSRAVILQEINPGLSI
WFDRFIIYLRLHGRNFTKEDHVLFINLFLNLMEMPEMGPSGIKGIAMLLQ
KLLKKEELLTRNDLTISWRPLYELVKSIKYSKLTPVGLERFPSKYVETIL
SVIKYARSYFPVEATQEMLLEFRPLLCPTDATKTNAALYLSLFLPTKIER
GTESKTYLLWLDELMEYWFHCTTSNVASVYLRLFSRLAEDNAGYLDWSKY
INRIFNFFFCKLSLPINGMRRGFDLKGTMSNSADFAKWFVYMMGGEQGTV
IFDKLEKLFVTLKSFYHPSNYDKHSSVLLGFLNALTSAFVMRLNHERYRK
PSWTVDIPEKSKITDAEIERYVNIVKEVALLSVYSKQGSLQAALTLQNLA
LLRADLVIPQLLQSTFEALETLVEPHQVTATLMCITSVARPLASGGGCFP
SAPTNILPLLRLVLPGLDPNDFRKSMCAFNFISAIVSLIPLVNCMPAVHA
GIEMSEVEKELCLASEQFEDLILQFFDRCFVLVENSTTENITQQDSTLDS
TASAQDSMLGRSLVSTVQVVFMQCSKALFEVALDALFRFVSSRVLEVDVA
GKLVSDMCRGAVRARPKETLKKMLPYITNRVINLATVEGVQNEEHVDPEL
LWYLEMLSELGRCNGMELLQYKEVLKEVIKLTIHMKCKKAYSRAAQLLKS
ILCSVSEVYITEWMSVHYGFDLPPMEHFYIRDWGKPYPLDELNPKWHSPS
QEEMQFADELLKEFLVPELELLKEIINGRVLTRDEIHQHLQIIATCLYGA
ANLLPNWTDKRVEGVALPTLVSRECILNTVNLSDVEKFVCCINRKDVVYQ
MHNFFNFMSKTHEDDTKSFRMLARIYDILVLHNGVHWSDFNLRWKSASAV
KKALADRLHGNKMHVRAVQIERVQLQHDMRVLDQHAAAFSVTDKVVIDDL
LFMSTSEYAEVRIHSQKILFGCLEAFDVATRYVLPKMLENIHPKAQVSHE
KLKGTLYILQYSRIVYMLIHDWKLMASSWIPIVQANQSEKPSIVKLLNYL
IRKIQSKFETMKIERKIGESASKVAKQLLETKSPEARTSLSDSPADDSVY
PSDKFMKMGQDKCTKKNEENLANYRRLEQDLSKLLQDTSIHWRCSEMCTK
LMNLLLNNEVKSCHEVINTFLNLLVNDSHLLRQYAIRGIMAVLYQYKPQF
AKRKLNYPEHNIDASPDVLMKLMPGDNRTDNQWLQYNDTNPINSQEDLER
FSFIDKTHWGYQTWPLELDILSNQADFYTKIRNKDCLCKEENLIVDTLNN
SEYLEKFIKFHSMEVKKGEDRFQHIHYTLFKGLFRNYGPSMFELFRPVVN
DLLAGNNESKHRLAIEIIAGMIRGSKHWNYESLTMFWDFMVPLLQNVFVS
NVMEETVKDWILALVVSTESHDPNRFHRLFTMLLNNPINGDGGSQGDTNR
LFIIRKTLGQQEWRLANVNHNMMKYLLPHLTHPFQNVREKVGSLVSYILL
FDLKYASHTPTLSPRCEMFVDYVYEDILKLYQITLGEIEAHEHQNEAMEI
DGVGVTEETKKLERMAKTVLSFLVNKSANFQPVNKALYRIIPLLLVLESR
EDDPELVGLCKYTFPALASKQLPDDLAQPAIQSIIQVCYNKKSWNLRRTG
LNYLMMMVFHNLYILDDEATRNQLQEMLIERLKDEQVEVREIASKLLSGL
VHFGYFSITEELLSTFHTMAKIKMKKKRHGIELTQAQTDKNVLALQVKHG
GVLGLSALVLAFPYDVCTWIPEVVIDLGNYLHEVPQISATAKKTLSEFRR
THHDNWHIHQQQFTDDQLSALTDLLISPSYYA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000326XLOC_000326Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000539TCONS_00000539Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021843DUF3437
IPR032430Blm10_mid
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1117..1137
NoneNo IPR availableCOILSCoilCoilcoord: 1665..1685
IPR021843Protein of unknown function DUF3437PFAMPF11919DUF3437coord: 1748..1832
e-value: 1.9E-32
score: 111.0
IPR032430Proteasome activator Blm10, mid regionPFAMPF16507BLM10_midcoord: 305..804
e-value: 1.6E-88
score: 297.6
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 74..1826
e-value: 3.9E-39
score: 134.0
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1579..1823
coord: 1339..1395
coord: 1119..1198
coord: 947..1060
coord: 1469..1503

Blast
BLAST of TCONS_00000539-protein vs. Swiss-Prot (Human)
Match: PSME4 (Proteasome activator complex subunit 4 OS=Homo sapiens GN=PSME4 PE=1 SV=2)

HSP 1 Score: 1271.53 bits (3289), Expect = 0.000e+0
Identity = 716/1848 (38.74%), Postives = 1090/1848 (58.98%), Query Frame = 0
Query:    6 PQKLIVYNKHLPYSIKKEAER--QLSEIKYNLSRAVILQEINPGLSIWFDRFIIYLRLHGRNFTKEDHVLFINLFLNLMEMPEMGPSGIKGIAMLLQKLLKKEELLTRNDLTISWRPLYELVKSIKYSKLTPVGLERFPSKYVETILSVIKYARSYFPVEATQEMLLEFRPLLCPTDATKTNAALYLSLFLPTKIERGTESKTYLLWLDELMEYWFHCTT-SNVASVYLRLFSRLAEDNAGYLDWSKYINRIFNFFFCKLSLPINGMRRGFDLKGTMSNSADFAK---WFVYMMGGEQGTVIFDKLEKLFVTLKSFYHPSNYDKHSSVLLGFLNALTSAFVMRLNHERYRKPSWTVDIPEKSKITDAEIERYVNIVKEVALLSVYSKQGSLQAALTLQNLALLRADLVIPQLLQSTFEALETLVEPHQVTATLMCITSVARPLASGGGCFPSAPTNILPLLRLVLPGLDPNDFRKSMCAFNFISAIVSLIPLVNCMPAVHAGIEMSEVEKELCLASEQFEDLILQFFDRCFVLVENSTTENITQQDSTLDSTASAQDSMLGRSLVSTVQVVFMQCSKALFEVALDALFRFVSSRVLEVDVAGKLVSDMCRGAVRARPKETLKKMLPYITNRVINLATVEGVQNEEHVDPELLWYLEMLSELGRCNGMELLQYKEVLKEVIKLTIHMKCKKAYSRAAQLLKSILCSVSEVYITEWMSVHYGFDLPPMEHFYIRDWGKPYPLDELNPKWHSPSQEEMQFADELLKEFLVPELELLKEIINGRV-LTRDEIHQHLQIIATCLYGAANLLPNWTDKRVEGVALPTLVSRECILNTVNLSDVEKFVCCINRKDVVYQ-MHNFFNFMSKTHEDDTKSFRMLARIYDILVLHNGVHWSDFNLRWKSASAVKKALADRLHGNKMHVRAVQIERVQLQHDMRVLDQHAAAFSVTDKVVIDDLLFMSTSEYAEVRIHSQKILFGCLEAFDVATRYVLPKMLENIHPKAQ-VSHEKLKGTLYIL--QYSRIVYMLIHDWKLMASSWIPIV-----QANQSEKPSIVKLLNYLIRKIQSKFETMKIERKIGESASKVAKQLLETKSPEARTSLSDSPADDSVYPSDKFMKMGQDKCTKKNEENLANYRRLEQDLSKLLQDTSIHWRCSEMCTKLMNLLLNNEVKSCHEVINTFLNLLVNDSHLLRQYAIRGIMAVLYQYKPQFAKRKLNYPEHNIDASPDVLMKLMPGDNRTDNQWLQYNDTNPINSQEDLERFSFIDKTHWGYQTWPLELDILSNQADFYTKIRNKDCLCKEENLIVDTLNNSEYLEKFIKFHSMEVKKGEDRFQHIHYTLFKGLFRNYGPSMFELFRPVVNDLLAGNNESKHRLAIEIIAGMIRGSKHWNYESLTMFWDFMVPLLQNVFVSNVMEETVKDWILALVVSTESHDPNRFHRLFTMLLNNPINGDGGSQGDTNRLFIIRKTLGQQEWRLANVNHNMMKYLLPHLTHPFQNVREKVGSLVSYILLFDLKYASHTPTLSPRCEMFVDYVYEDILKLYQITLGEIEAHEHQNEAMEIDGVGVTEETKKLERMAKTVLSFLVNKSA-NFQPVNKALYRIIPLLLVLESREDD---PELVGLCKYTFPALASKQLPDDLAQPAIQSIIQVCYNKKSWNLRRTGLNYLMMMVFHNLYI-LDDEATRNQLQEMLIERLKDEQVEVREIASKLLSGLVHFGYFSITEELLSTFHTMAKIKMKKKRHGIELTQAQTDKNVLALQVKHGGVLGLSALVLAFPYDVCTWIPEVVIDLGNYLHEVPQISATAKKTLSEFRRTHHDNWHIHQQQFTDDQLSALTDLLISPSYYA 1832
            PQK IVYNK LPY+ + +AE   QL++IK NL RAV LQE+ PG   W  +   Y+RL+GR F+KEDHVLFI L   L+ +P++  S ++G A LL  LLKK+ELL+R DL + WRPLY++V+ I YSK   +GL  FP+     + +++K  R YFP +AT EML E+RPL+CP D T   A  Y  +FLPT +      K + LW DEL+  W             + LF+RLA DN GY+DW  Y+ +IF      L+LP+   +    +   ++N+ D      W   MMGG    ++   L  LF ++ SFYHPSN  +  + L+  L  L ++ V RL+ ERY+KPSW   +P+  K+TD ++  +V  + +  LL+++SK GSL+AA  LQNLAL+R +LVIP +L+ T+ ALETL EPHQ+TATL C+  VAR L SGG  FP  PT++LPLL   LPG+DPNDF K M  F FI+   +L+PLV+C   +    +++EVE+ELC A+ +FED +LQF DRCF L+E+ST E   ++  T     +  +S++   L ST   +  QCSK +F VAL  +F F +S + E  VAG++V+DMCR AV+  P+E+LK  +P+  + +  L   + V N+E +D ELLW L++LSE+ R +G +LL Y+E L ++++ T+H+ CK+ Y+ +  LL  +L S + +Y TE+ SV  GFD PP E+F I+DWGKP  L  L  +WH PS EE+ FA  LL  FL PEL  L+   +G++ ++RD+I Q L I+  CL G+ NLLP    + V  + +P++VS E    T   + +E  +   N ++V+   +    N +    EDDTKS  ++ +I   L+   G H  +F+ RWKS + VKK++ +RLHG K H+RA+ I+RV LQH++R L      +    + +I DLL +STS Y++VR  +Q+  F  L A++   R ++P +LE + P  Q V+ ++ KG LY L   +S +    +HDW  +  +W  IV     QA   EKPSIV+L + L  KI  ++ET+ ++  I +S  ++A+ L ++K+P            + +  S + +K G  +  +KN + L NY  L   L   ++  ++ W+   +   L++LLL ++       I  F+  L +D+ ++R+ AI  +  +L Q K    K  +N  E  I   P    +++ GD R DN WL Y+      ++++ E   F++KTHWGY TWP  + + +   +     R+++ + + E +I D  ++ +++E+ I F S+E +KG+D+F    + LFKG+FRN+  +   + +P +  L+A ++ES  R   EIIAG+IRGSKHW +E +   W+ + PLL+   +SN+  ET  DW   +  S ES DP + H LF +LL +P++G+GGS  D  RL++++  L QQEWR+  + H ++KYL P LT  ++NVRE++GS+++YI + D+   + TPT+SP    F   + E +  L  +        E QN  ME +G+G  +E  +  ++ KT+L +L+  +  +F        +++PL   +   E+D    EL    K    +L S+ L      P +  +++      SW+ R T L YL  MVF+NL+I L++E     ++ ++I  L+DEQ+EVRE+A+  LSGL+   + ++   +   F  + K K+ KKR     +   T  +   L  +H GVLGL A VL+ PYDV TW+P+++++L  +L++   I  T KKTLS FRRTHHDNW  H+QQFTDDQL  LTDLL+SP YYA
Sbjct:   28 PQKEIVYNKLLPYAERLDAESDLQLAQIKCNLGRAVQLQELWPGGLFWTRKLSTYIRLYGRKFSKEDHVLFIKLLYELVSIPKLEISMMQGFARLLINLLKKKELLSRADLELPWRPLYDMVERILYSKTEHLGLNWFPNSVENILKTLVKSCRPYFPADATAEMLEEWRPLMCPFDVTMQKAITYFEIFLPTSLPPELHHKGFKLWFDELIGLWVSVQNLPQWEGQLVNLFARLATDNIGYIDWDPYVPKIFTRILRSLNLPVGSSQ--VLVPRFLTNAYDIGHAVIWITAMMGGP-SKLVQKHLAGLFNSITSFYHPSNNGRWLNKLMKLLQRLPNSVVRRLHRERYKKPSWLTPVPDSHKLTDQDVTDFVQCIIQPVLLAMFSKTGSLEAAQALQNLALMRPELVIPPVLERTYPALETLTEPHQLTATLSCVIGVARSLVSGGRWFPEGPTHMLPLLMRALPGVDPNDFSKCMITFQFIATFSTLVPLVDCSSVLQERNDLTEVERELCSATAEFEDFVLQFMDRCFGLIESSTLEQTREETET--EKMTHLESLVELGLSSTFSTILTQCSKEIFMVALQKVFNFSTSHIFETRVAGRMVADMCRAAVKCCPEESLKLFVPHCCSVITQLTMNDDVLNDEELDKELLWNLQLLSEITRVDGRKLLLYREQLVKILQRTLHLTCKQGYTLSCNLLHHLLRSTTLIYPTEYCSVPGGFDKPPSEYFPIKDWGKPGDLWNLGIQWHVPSSEEVSFAFYLLDSFLQPELVKLQHCGDGKLEMSRDDILQSLTIVHNCLIGSGNLLPPLKGEPVTNL-VPSMVSLE---ETKLYTGLEYDLSRENHREVIATVIRKLLNHILDNSEDDTKSLFLIIKIIGDLLQFQGSHKHEFDSRWKSFNLVKKSMENRLHGKKQHIRALLIDRVMLQHELRTLTVEGCEYKKIHQDMIRDLLRLSTSSYSQVRNKAQQTFFAALGAYNFCCRDIIPLVLEFLRPDRQGVTQQQFKGALYCLLGNHSGVCLANLHDWDCIVQTWPAIVSSGLSQAMSLEKPSIVRLFDDLAEKIHRQYETIGLDFTIPKSCVEIAELLQQSKNPSI----------NQILLSPEKIKEGIKRQQEKNADALRNYENLVDTLLDGVEQRNLPWKFEHIGIGLLSLLLRDDRVLPLRAIRFFVENLNHDAIVVRKMAISAVAGILKQLKRTHKKLTINPCE--ISGCPKP-TQIIAGD-RPDNHWLHYDSKTIPRTKKEWESSCFVEKTHWGYYTWPKNMVVYAGVEEQPKLGRSREDMTEAEQIIFDHFSDPKFVEQLITFLSLEDRKGKDKFNPRRFCLFKGIFRNFDDAFLPVLKPHLEHLVADSHESTQRCVAEIIAGLIRGSKHWTFEKVEKLWELLCPLLRTA-LSNITVETYNDWGACIATSCESRDPRKLHWLFELLLESPLSGEGGSFVDACRLYVLQGGLAQQEWRVPELLHRLLKYLEPKLTQVYKNVRERIGSVLTYIFMIDVSLPNTTPTISPHVPEFTARILEKLKPLMDVD------EEIQNHVMEENGIGEEDERTQGIKLLKTILKWLMASAGRSFSTAVTEQLQLLPLFFKIAPVENDNSYDELKRDAKLCL-SLMSQGLLYPHQVPLVLQVLKQTARSSSWHARYTVLTYLQTMVFYNLFIFLNNEDAVKDIRWLVISLLEDEQLEVREMAATTLSGLLQCNFLTMDSPMQIHFEQLCKTKLPKKRKRDPGSVGDTIPSA-ELVKRHAGVLGLGACVLSSPYDVPTWMPQLLMNLSAHLNDPQPIEMTVKKTLSNFRRTHHDNWQEHKQQFTDDQLLVLTDLLVSPCYYA 1843          
The following BLAST results are available for this feature:
BLAST of TCONS_00000539-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSME40.000e+038.74Proteasome activator complex subunit 4 OS=Homo sap... [more]
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