TCONS_00000478-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00000478-protein
Unique Name	TCONS_00000478-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	164

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00000478-protein ID=TCONS_00000478-protein|Name=TCONS_00000478-protein|organism=Clytia hemisphaerica|type=polypeptide|length=164bp
VNSLTKSNTEGLAVVESVEDPSEDFVRCRDYVDCKNCIKLDEFSKEHLLQ
GFTSKMTTAALKKYKINKHQARRIYEILRLYYTDRNNETMFREYRLDVKN
RLNIPYQKQARDMKKLEKALSAEEYNAAIVGSSRDERMQRLEDAFKSLCE
DEYARVIKRLNTYC

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000302	XLOC_000302	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00000478	TCONS_00000478	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016181	Acyl_CoA_acyltransferase

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01

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POSITION

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 106..126
IPR016181	Acyl-CoA N-acyltransferase	SUPERFAMILY	55729	Acyl-CoA N-acyltransferases (Nat)	coord: 17..81

Blast

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BLAST of TCONS_00000478-protein vs. Swiss-Prot (Human)
Match: HAT1 (Histone acetyltransferase type B catalytic subunit OS=Homo sapiens GN=HAT1 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.038e-33
Identity = 66/144 (45.83%), Postives = 92/144 (63.89%), Query Frame = 0

Query:   17 SVEDPSEDFVRCRDYVDCKNCIKLDEFSKEHLLQGFTSKMTTAALKKYKINKHQARRIYEILRLYYTDRNNETMFREYRLDVKNRLNIPYQKQARDMKKLEKALSAEEYNAAIVGSSRDERMQRLEDAFKSLCEDEYARVIKRL 160
            + EDPS+ +V+ RD+V  K C  L  FS+E L+QGF   M   A +K+KINK  ARR+YEILRL  TD ++   +R YRLD+K RL  PY+K+ RD+ K+ K L  EE    +       + ++LE++F+ L ED Y RVI+RL
Sbjct:  274 TAEDPSKSYVKLRDFVLVKLCQDLPCFSREKLMQGFNEDMAIEAQQKFKINKQHARRVYEILRLLVTDMSDAEQYRSYRLDIKRRLISPYKKKQRDLAKMRKCLRPEELTNQMNQIEISMQHEQLEESFQELVED-YRRVIERL 416

The following BLAST results are available for this feature:

BLAST of TCONS_00000478-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00000478-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1

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Match Name	E-value	Identity	Description
HAT1	1.038e-33	45.83	Histone acetyltransferase type B catalytic subunit...	[more]

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TCONS_00000478-protein (polypeptide) - C. hemisphaerica

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