TCONS_00000457-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00000457-protein
Unique Name	TCONS_00000457-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	784

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00000457-protein ID=TCONS_00000457-protein|Name=TCONS_00000457-protein|organism=Clytia hemisphaerica|type=polypeptide|length=784bp
REFWPDDAVFGSNDISREDEFMLLRSLLFQELDRPEYMNEMAAEDNEEEE
AGGEDEEEDDPGEEEEVEENRVESVEREFNMKAFLSSLASPQILIPYAYL
LKNFEKNTSSTNHAIIKMMHRVAVELKFPEMFFQLSIFITFKELLDVECS
EYKELCKFAKYITGKFVAAASERPKIFVEALFWKGTGDCYQISEREDQMP
NQSAKYREKWTFEDEEELKSLYEQYRDSDDVVGDILKSIVDKDRTRRQIS
NKLVRMRLVDSAKDLPRPKKAKARDWSEEQTEELHRLFEEFKETDNILNN
IMVAITSGKSKQAVVAQLIATGKISDRTQLKKKKEKKRRRRRNEEFKELV
DGEDGENDSGSSSDEENEEGNLENFLESQRSSNANATNSNSPANNSDDSD
NDDQADITLDDSVVDDLPSNASVSDLTRKVKEIGFSQQIIWLQTRLTREA
EAREEDPQDEWYTTPLLTMTDEDERAMKNRLFRRLLRKIGVKPPADFNVA
TWWTIPPSLTPAYLRKMISQIESTVSSTSIAPRESNTQNESVTDLTPDEP
STSVSASASASASGKESQYQNTVNPTENESEISTATTTNKKKKKKSRVMI
ESDSEDDSEDGGLVVDELYKSPMKETKQSTNQSMDKDAENSDAEPKRRIS
MMDSDDDIENSDKTPLEESQVSKNADQKDVEHFNGENVISKPGTKRRSVM
LNSDSEDDEKENQPKRSRVEESEKPPNIIDEDLPIKSKPSTLPPTEEVLN
TMESEFDHEQSALNFSLHLSEGEDEIEEEATVGR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_000288	XLOC_000288	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00000457	TCONS_00000457	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007725	TIMELESS_C

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007725	Timeless C-terminal	PFAM	PF05029	TIMELESS_C	coord: 118..706 e-value: 6.7E-58 score: 197.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 525..745
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..420

Blast

[Close]

BLAST of TCONS_00000457-protein vs. Swiss-Prot (Human)
Match: TIM (Protein timeless homolog OS=Homo sapiens GN=TIMELESS PE=1 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 1.565e-74
Identity = 190/521 (36.47%), Postives = 283/521 (54.32%), Query Frame = 0

Query:    1 REFWPDDAVFGSNDISREDEFMLLRSLLFQELDRPEYMNEMAAEDNEEEEAGGEDEEEDDPGEEEEVEENRVESVEREFNMKAFLSSLASPQILIPYAYLLKNFEKNTSSTNHAIIKMMHRVAVELKFPEMFFQLSIFITFKELL-DVECSEYKELCKFAKYITGKFVAAASERPKIFVEALFWKGTGDCYQISEREDQMPNQSAKYRE-KWTFEDEEELKSLYEQYRD--SDDVVGDILKSIVDKDRTRRQISNKLVRMRLVDSAKDLPRPKKAKARDWSEEQTEELHRLFEEFKETDNILNNIMVAITSGKSKQAVVAQLIATGKISDRTQLKKKKEKKRRRRRNEEFKELVDGEDGENDSGSSSDEENEEGNLENFLESQRSSNANATNSNSPANNSDDSDNDD-QADITLDDSVVDDLPSNASVSDLTRKVKEIGFSQQIIWLQTRLTREAEAREEDPQDEWYTTPLLTMTDEDERAMKNRLFRRLLRKIGVKPPADFNVATWWTIPPSLTPAYLRK 516
            RE WP+  VFGS DIS E+E  LL+ +L   L R              EE G E+EEE++  EEEE++   V+  E+EFN   +L   A   ++  Y  LL+++++N++ TNH I+KM+HR+A +LK   + FQLS+F  F  LL D     YKEL  FAKYI GKF A A+   K FVE LFWK T    +++E    + ++S+  R   W+ E+E  L+ LY   +D    DVV  IL  +    RTR+QI + LV+M L DS KD  R K      W+ +Q  EL RLFEEF+++D++L +IM  IT+ +S+  +V +L+A G +++R +L KK++KK                       +SS   N   +L++F +       N    +S       S+ +  Q  + L +             +L + + + GFS  ++WLQ  L R A+ REED   +    PL+ +T+E+E AM+N  F++LLRK+GV+PPA     T+W IP  L+P  LR+
Sbjct:  623 REVWPEGDVFGSQDISPEEEIQLLKQILSAPLPR----------QQGPEERGAEEEEEEEEEEEEELQV--VQVSEKEFNFLDYLKRFACSTVVRAYVLLLRSYQQNSAHTNHCIVKMLHRLAHDLKMEALLFQLSVFCLFNRLLSDPAAGAYKELVTFAKYILGKFFALAAVNQKAFVELLFWKNTAVVREMTEGYGSLDDRSSSRRAPTWSPEEEAHLRELYLANKDVEGQDVVEAILAHLNTVPRTRKQIIHHLVQMGLADSVKDFQR-KGTHIVLWTGDQELELQRLFEEFRDSDDVLGHIMKNITAKRSRARIVDKLLALGLVAERRELYKKRQKKL----------------------ASSILPNGAESLKDFCQEDLEEEENLPEEDSEEEEEGGSEAEQVQGSLVLSNE------------NLGQSLHQEGFSIPLLWLQNCLIRAADDREEDGCSQ--AVPLVPLTEENEEAMENEQFQQLLRKLGVRPPAS-GQETFWRIPAKLSPTQLRR 1093

The following BLAST results are available for this feature:

BLAST of TCONS_00000457-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00000457-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TIM	1.565e-74	36.47	Protein timeless homolog OS=Homo sapiens GN=TIMELE...	[more]

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TCONS_00000457-protein (polypeptide) - C. hemisphaerica