TCONS_00000143-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00000143-protein
Unique NameTCONS_00000143-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length408

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00000143-protein ID=TCONS_00000143-protein|Name=TCONS_00000143-protein|organism=Clytia hemisphaerica|type=polypeptide|length=408bp
MPRKAMKCIVEVDLHVTTCPGTFLRDYEYVYLHMEMLGLEARTKSVPPTF
PLFFHERLKFERTFYDCTDPALVAAVLKGEDLIIELRQHTDYISDGKVIS
HCSSNTHDFLYPAIPPYYGSGREILLYKTAKFKPIRVTGEPVKLEFSTKT
VIKEVPDFETSGALDKSSRTIASPIKSTKHKQLADSRVPKPPGRPKTSGA
GDGGLRRSKSKSSSTPDLTLVGDSKNEFLVRRKDDQLISNRDFNSFTRPK
PRRSVSPSRSMRRSVSPSRPRTFNGNTTVESIPATVYRSSSPARHYRSVT
EPTYLSSTTPRNLTTRLDDLDLSLASTKRRVHTVTPNMNHALRSSQRIQR
RVDELVRRRDFNYVDSDAESDYSLDLLRESLRDERNALNDAIKEADREAF
YRSLNRTR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000082XLOC_000082Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00000143TCONS_00000143Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032732SPATA6_N
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 374..398
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 163..220
IPR032732Spermatogenesis-associated protein 6, N-terminalPFAMPF14909SPATA6coord: 10..152
e-value: 2.5E-38
score: 131.2

Blast
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BLAST of TCONS_00000143-protein vs. Swiss-Prot (Human)
Match: SPAT6 (Spermatogenesis-associated protein 6 OS=Homo sapiens GN=SPATA6 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.723e-21
Identity = 53/159 (33.33%), Postives = 88/159 (55.35%), Query Frame = 0 
Query:    1 MPR-KAMKCIVEVDLHVTTCPGTFLRDYEYVYLHMEMLGLEARTKSVPPTFPLFFHERLKFERTFYDCTDPALVAAVLKGEDLIIELRQHTDYISDGKVISHCSSNTHDFLYPA---IPPYYGSGREILLYKTAKFKPIRVTGEPVKLEFSTKTVIKEV 155
            MP+ KA++C + +++   TCPG  L+D E +YL + + G   +T+ VP TFPL F+ R+ FE+ F D  DP  V   L+ +  + EL Q    +  G+ +S    NT DF++P    +  ++ S R++ + + +  +     G   +LEFST +VI E 
Sbjct:    1 MPKVKALQCALALEISSVTCPGVVLKDKEDIYLSICVFGQYKKTQCVPATFPLVFNARMVFEKVFPDAVDPGDVVTQLEYDTAVFELIQLVPPV--GETLSTYDENTRDFMFPGPNQMSGHHDSNRQVTMRRISGLR-----GNAPRLEFSTTSVITEC 152
The following BLAST results are available for this feature:
BLAST of TCONS_00000143-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SPAT62.723e-2133.33Spermatogenesis-associated protein 6 OS=Homo sapie... [more]
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