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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00000143-protein ID=TCONS_00000143-protein|Name=TCONS_00000143-protein|organism=Clytia hemisphaerica|type=polypeptide|length=408bp
MPRKAMKCIVEVDLHVTTCPGTFLRDYEYVYLHMEMLGLEARTKSVPPTF
PLFFHERLKFERTFYDCTDPALVAAVLKGEDLIIELRQHTDYISDGKVIS
HCSSNTHDFLYPAIPPYYGSGREILLYKTAKFKPIRVTGEPVKLEFSTKT
VIKEVPDFETSGALDKSSRTIASPIKSTKHKQLADSRVPKPPGRPKTSGA
GDGGLRRSKSKSSSTPDLTLVGDSKNEFLVRRKDDQLISNRDFNSFTRPK
PRRSVSPSRSMRRSVSPSRPRTFNGNTTVESIPATVYRSSSPARHYRSVT
EPTYLSSTTPRNLTTRLDDLDLSLASTKRRVHTVTPNMNHALRSSQRIQR
RVDELVRRRDFNYVDSDAESDYSLDLLRESLRDERNALNDAIKEADREAF
YRSLNRTR Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR032732 | SPATA6_N |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 374..398 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 240..310 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 163..220 |
| IPR032732 | Spermatogenesis-associated protein 6, N-terminal | PFAM | PF14909 | SPATA6 | coord: 10..152
e-value: 2.5E-38
score: 131.2 |
Blast
BLAST of TCONS_00000143-protein vs. Swiss-Prot (Human)
Match: SPAT6 (Spermatogenesis-associated protein 6 OS=Homo sapiens GN=SPATA6 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.723e-21 Identity = 53/159 (33.33%), Postives = 88/159 (55.35%), Query Frame = 0 Query: 1 MPR-KAMKCIVEVDLHVTTCPGTFLRDYEYVYLHMEMLGLEARTKSVPPTFPLFFHERLKFERTFYDCTDPALVAAVLKGEDLIIELRQHTDYISDGKVISHCSSNTHDFLYPA---IPPYYGSGREILLYKTAKFKPIRVTGEPVKLEFSTKTVIKEV 155
MP+ KA++C + +++ TCPG L+D E +YL + + G +T+ VP TFPL F+ R+ FE+ F D DP V L+ + + EL Q + G+ +S NT DF++P + ++ S R++ + + + + G +LEFST +VI E
Sbjct: 1 MPKVKALQCALALEISSVTCPGVVLKDKEDIYLSICVFGQYKKTQCVPATFPLVFNARMVFEKVFPDAVDPGDVVTQLEYDTAVFELIQLVPPV--GETLSTYDENTRDFMFPGPNQMSGHHDSNRQVTMRRISGLR-----GNAPRLEFSTTSVITEC 152
The following BLAST results are available for this feature:
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