Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00000034-protein ID=TCONS_00000034-protein|Name=TCONS_00000034-protein|organism=Clytia hemisphaerica|type=polypeptide|length=586bp
SKIQFIIKMGCRCDSNACGSCACSKANELCTPQCHGGQSIDNVPCMNTEA
GKKVKTMKIKDVRTALIANGLSIIGDRGELYKRLADQIRKSGASNSTSNE
SGSTSASGKSNEGDAKNELFKIILENEDNYPFILSLSGKKIQANSGKAEL
RKAYLLLSSKVHPDKNPGNQEAVKAFQALLSAYERLANPEKFADEDDEDE
KPAKKRQKTERFTRSNGGCFKTKVKCPQCKTEWGLPVVGLEDCAYNFIMT
GLKQYICHVCSCQFGCMTALHYCPHCRKEFSYDPDDYHRKITCGNIKCNK
EFGFWMFKVSERREKEVRQEAKELHESRLKKAAQKKRRAQRAGNRDAGED
GASKQRLQEQLFLLQLRDSCPRCGWELERGEGHDEAQQHLTECNDKVKIR
EYQQEVADEEAEARSKLDAKASEEEILALKQWESNGRQLGQLWMLSDTML
KRQCETFNLPIKGKRHELIQRLSQHIRSQARLMITDGKTDVSGGASGYDA
CSLKHADAEDLPQNLNSLDKEQLQDLCASYGVKFNPRKDVKKDLIKKFEM
TRYKGTEQQLMLGYGEEKNKRRAAIKDKDEDYVPDE Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 399..419 |
| None | No IPR available | COILS | Coil | Coil | coord: 322..342 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 91..113 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 321..354 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 191..210 |
| IPR001623 | DnaJ domain | PRINTS | PR00625 | JDOMAIN | coord: 136..154
score: 20.81
coord: 154..169
score: 47.37
coord: 171..191
score: 36.54 |
| IPR001623 | DnaJ domain | SMART | SM00271 | dnaj_3 | coord: 128..191
e-value: 1.1E-10
score: 51.5 |
| IPR001623 | DnaJ domain | PFAM | PF00226 | DnaJ | coord: 141..191
e-value: 5.0E-11
score: 42.5 |
| IPR001623 | DnaJ domain | GENE3D | 1.10.287.110 | | coord: 135..222
e-value: 4.2E-14
score: 52.2 |
| IPR001623 | DnaJ domain | PROSITE | PS50076 | DNAJ_2 | coord: 129..213
score: 13.009 |
| IPR001623 | DnaJ domain | CDD | cd06257 | DnaJ | coord: 141..186
e-value: 4.84325E-10
score: 54.8589 |
| IPR001623 | DnaJ domain | SUPERFAMILY | 46565 | Chaperone J-domain | coord: 141..191 |
| IPR003034 | SAP domain | SMART | SM00513 | sap_9 | coord: 515..549
e-value: 14.0
score: 7.5
coord: 442..476
e-value: 2.5E-4
score: 30.4
coord: 54..88
e-value: 2.9
score: 13.5 |
| IPR003034 | SAP domain | GENE3D | 1.10.720.30 | | coord: 24..112
e-value: 0.16
score: 11.5
coord: 309..482
e-value: 2.0E-5
score: 24.1 |
| IPR003034 | SAP domain | PROSITE | PS50800 | SAP | coord: 442..476
score: 9.247 |
| IPR003034 | SAP domain | SUPERFAMILY | 68906 | SAP domain | coord: 440..477 |
| IPR011015 | LEM/LEM-like domain | GENE3D | 1.10.720.40 | | coord: 514..550
e-value: 0.073
score: 12.4 |
Blast
The following BLAST results are available for this feature:
|
