XLOC_045844 (gene) - C. hemisphaerica

Overview
NameXLOC_045844
Unique NameXLOC_045844
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_98:66078..75746-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045844 ID=XLOC_045844|Name=XLOC_045844|organism=Clytia hemisphaerica|type=gene|length=9669bp|location=Sequence derived from alignment at scaffold_98:66078..75746- (Clytia hemisphaerica)
CAGAAAAACGTTAAGATAAACAATAAAAATGGAGTCAAATCAACTTAAAG AAATGCTATCGATGGAAAAAGTTGATTATTCCCAATGGGAGCGAAAGAAA GTTCAAGAGAAGAAAGTTAACTTGAAGAAAAGGTACTATAGTTGTTTTAA CTCATGTTTTTTTGGCTGACTCTTTGCTGAATCGACCTCGCGAGCCATTT GCGAAATTCCACGTCTACCGGGGTAGACGTCTTGAGACCAAACTAACATA CTAATGTTCTAAAGTTGTTTGAGTAATCAACTTTAAAAGATAGTCTGACT TAAAATTTGAGGTATCATAATTTTTAGTAAAATATCTCCGTCGGTAGTTT TGAAAATTTCTCAAAAGTTTCAAATTGAAAATAAAGAATTATGCAAAAGT TTAAAGAAATTTTGCGTATTTTTTACCCTTTTCGAAAAGCGCATTTTGAC TTTGAAAATTTATAGCTAAAGAACTAGCTGATCGAATTAGAAAATTTATA CACCAAACTTTGAGTTAGAGTGTCTGCTATAAAAATTTCACCACCCCAAC GAACTGCAGGGTATTGTTTTGGCTGCGAGACGTCAAAAACTGTCCGATGC CTTCAATTTGTTTTGCGCAAAATATTGACCAGAAATGCGATAAAACGAAT TTCTTTAGAACTTAATTCTCAGCATATTTGCAAAGGGAACTGGACCATTT TGGTTAACCTTTCAAGCAGTTTCGTTGAATGAAGAATGAAAAAATTTATA TCGATAAGTTTTCTACTTAAATCTTAGTAATTCATCTTTGGCATCCCCAC CGCGCCCAAAAACCATATCGAGAGCCGGAAGTTCACGGTTACCCACAGCA ACGCCCACAAACAATGAATTTCAAAATGGCGGAGAAGTAACAGCGGACCC ATTTCGTGACTTGCGAAAAGAATGTTCAACGCTTTGTCGCCACGGACCTC GGAAAGTGAAATCACCGGAGTTTATTCGAAAAGAAAACAAGACAGTCAAA GAAGGAGTTATCTCCTTACTGAAGGTCAGTGTTTAATTATCCGGAAAAAC GATTTGATTTCTCGCTCATTCTTGGGCCCTTCAAAGAGACTTCATTTAAC ATGAGAACTCGAATCAACCGAAATTTTTTTACAAAACATACTCTTAGGTG CCAAATAAACGGGCCCCCCCCCGCTTGTTAATTTTTCGATTTTTTTCCAA CCCCCCCGGACCTTATTAGGACCCCCCCGTTTATTAATTTTTGAAAAAAT TCCCAGCTACCAAAAGGAAAGTTCCTCTTTTTACTCTAAAAAGCCTAAAT TTAGTCTATTTTGACCCTTTTTAGGGTTTTTTAAGGTCCATTTTCCAACC CCCCCGGACCTTATTAGGACCCCCCCGTTTATTAATTTTTGAAAAAATTC CCAGCTACCAAAAGGAAAGTTCCTCTTTTTACTCTAAAAAGCTTCCTCTT TTTACTCTAAAAAGCCTAAATTTAGTCTATTTTGACCCTTTTTAGGGTTT TTTAAGGTCCATTTTCCAACCCCCCCCGGTAATTAGGTCCCCCCCGTTTA TTTAATTTGAAAATTTTTTCGAACCCCCCCGTTTATTCGAACCCCCCCGT TTATTTGGCACCTAAGAGTAACGTCCTTGAGAGGTTTTTTGAAAGCTAAA TGACGATGTCTATAAAAAGAACATTGAACCCTTTAATTATAAGAACTAAA CGCATCATGGATCGTCTTAACATTTTGGGGAAAATTATCTTGAAATATTC TAAGTTTAGAGATCCAAATTCAACCTAAATTTAACGTGGAATATATACCT GGAGCAAGAAAGTTTTGAGCCTCACTGGGCGGTATAATTGACAGTTTTAA GTAAAAAAGGATCTAATGACATTCTTAGGTTCAGCAGTTGGCAAATATTC CATGATGGTGATACTCTTAGCATATTCTTAATTCTTGACCAATTTCATCA TGAATATTCTTATAGAGTACATTCCTATAAAAAGCGTGTATTCTTCAAGC AATATTCATACGAACAATATTCCACCTAGTTAAAGGAGAACTTTAATAAG CTCTTTTTTTTCAAAATTATATTCAGGTTCAAATCAAAGACAATCGAAAG TCACTTCATGAAAGTAAACAACGCTATCTTCAACTGTATCTTTTCTACTC TTTTGTTTACGTTTGACAAACGTGTTTATATTACTTCTATTTCAGGGGTT TTGCTTTGTTTTTGATAGGCTGACAAATGAAAAATTAAAAATCCGGTGAA ACCCAGATTCTAGGCCGGAGAATGCTTAGGAAGTGTGTATCGCCTAGCAT TGATATACACTTGAAACGTCGAACCGAATATTTAAACCGGTGAAATTGTA ATGTATTTTGCCGTTCACCGCCGTTCAAATAAGATGTCTGTGATTGTCCC TCTTTGAAGATCATTGTTTTCTTTAATTCATCACGTTCTCATACAGAATG AAAGACAACTTTAGGTTGAAGGAAGAAATCACATCTTTCGAACGAGAAAC GGTAATCATTTTCAGACTCGTATGGATAGATAAGAACATCCATTTCTAAA TGAACCTTATGAGAATTTTCTAAATAAAATGGATGAGCTAGAATGCCAAT CGGGAAGTTTCGGGAAGTTTCGACGAGAAGAGATTATTCAGGAAAGTTCC CTTCGGATGTACGGCAACCCTGATTGGACACTGAAAAGTTTATTTTATTT TTCTTGATTTCATTACTCAGTACTCTTTAAATCGGTCTGTTTTTTTCTAT AACTTTTAGCATCATGACGTCACAGACATGCTGGAATGCCATCGAAAATA TCGAGTAGGAAACATTCTTCTACCTTTTAACTAATAACTGCAATTGTATT AAAAGGACGTACCACTCTTTGAAAACTTTTTGAGAACTTCATGTTTACAA AATCAAGAAGTTTGTTCAAATATGTAACGTAAAAAGAGAAGCTTTAGCGG AAGAAAACTTGTTTCACTTTAATTATTTCATAAGAACAACCAAAGTTTTT GAAGCTTTCGGATTTAAACATAAAAATGTTCTCAACATGTTCTTATTTTA ACCACTTTTTGAGTATTGTTGTCTTGTTGTCCATTTTTCGAAGAAATCGG GGCAGTTTTAGAGTCCGCAAAGCCTTAAAATGTTCTTAACTGGTCCTTTA AATAATTAAGCCATTGAAGCCTTGTGTTCTTATAAAGTTTGTTCTTGTTA AAAAAAGCGTGCTTTTAAAAAGTTTAACTGATGTCCCATTTCTTTAGACA GGTATTTCGGTGTTGACGTCACAACATTCGAATACGATCATTGGTCATCA AGAAGAACTCGAATTGAAGGAACGAAGAGTCAAATTCGCATCTAACAGTA AGTACAACTTCTACGGAAAGGCCTACGTTTTTCCAAATGCTTTTAGTATG GAATCTGAAGTTTCGATAGTCAGCTGGCCTCAACTAGGGTTTTCGCGTGC TCCTTATATATACCTGTGGATTTGCAGTGATTGCTGGTCTCTTTTATTTT TCGCCATCAAACTCACTTTTTTTTAGCCTCTTGTGCTTGTTCTGTCTCAA AAAGGGTTTGCTTTTGAAATTGGACATGCTAGAGAAGAAGGTCACCTGTG GTTAACAACTCGAGACGAAATCCTAGCTCCATTGTCTCTAGATAAATATT TAAATAGATCAACGCCAGAAGTTTTAATAATAAAATGAAGATTGCTGTTG ACACTTTTGAATAAAGTTGTTTTTATCAATCATAGTTGAAACACACTTCC ACTCAATACAGGTAATATTCAAGGAAGTCCTTTGTGCGCTTTATACTCTA TCTACACCAAGCAGATTTATTCTAACAATAATCTTTGTTTTTCTTCAGTT CTTCACAGTGATGTAGAAGATCTTGACCGTTCTATAGAAGAAGAAAAAAC GTCCCTCAAAATTCTCCTCAATTATAAAGTATGTCAACAAAACTGGAAGT AAAATCCTGTATCCGTACACAAGCCATGGATACTTTTGGTATCTCGATGA GATAAACCTCAATCTTTCCCTATTCTATGAGTTTGATCGATTCATGGGTT GGTTACCTCAGAGGGGCGGTTCTCACTATGGAATTAGGGTGCTCTATCGT GGGTCATTAATGTATAGTTATGAGGTGCGAACCATTCCCTGAATAGTAGG GGGGCCATTCTTTAGGACCCGTGACAACAATTTCCGTCAAACATTGAGAA AACGTCACTTTGGCATCGTTTTTCTCGAGTTAGGTTGAGAAATCGACCAT ATCTGCTTAAAAGTCCTCTATATCGTTTTTTGAGAGCTTTCCTCTGGTAT AAGTGGTTTTGTGTTTTAGCGACTTTGAAATTTCGTCAAATTTCGGGTCC TAAGGGTTTTTGCTTGTGACGTCAGTCTTTTCCCCATAAAAAAAATTGCT GGACCTAATTAATTTACTCCCTCTCAAAAAAGTTTCTAAATACATTCTTC TTTCGAATGAGCAAAAAAAATTCCACTCCGGAAATTGTTGTCACGGGTCC TAAAGAATGGCCCCCTACTAGAACTACTTGAAAAAAATTTTTTGCTCAGG AGAAAGAATATCCAGAGCAATTGGAACAGATCAAATATTTGAAGGAAGAA ATTGAAATCTTGTCAAAACAACACGAGAAGGTTATGGAGGAGCTCTCAGA CGTTGCCAATCGTGAACAAATCATTTACCAATCCAAAGCATACAATGTTT TAGACAATGTTAAGTCCAAATTTGCCGATGTAAGAACTATTTATCGCGAT AAATGTTATAGTGTTTTAGCATCATCATTTAAAAACCTTCCGAACATAGT GCACTAGAACTGTTTCATTTTTTTATTTTTTCATGCATTTTATATTTCTT TCCTCTTTGACAAGTAAAGCAACTAAGTCATTGTACCTTTCTTTACACTC CTTTACTGTTTATTTTCTTTTGGAAAGACACGGCCTCGTTGTTTTGGAAA AATCGACATTCTCGTCTATTTGACAAGTTTGAGCTCACGTTTGTTTTCTT TCACCCGATGAAGGATAAATCGGTCATAGAGTGATTACCGAGGATTTTTC CTTTTTTACATGTTTTCCGCTTTTCCTGTACTTCCTATCTGTAACGCAAC ATGAAGCTTAGTATCAAACTTTTTGTATCCTCTTTTCACAGGAAGCGTTG GACCAATTGGACCCTTCAATGAAAAGCCTGGCTTTACAGAACCGAACAAT GAGACAAGTAAGTGAGAAATATTATTAATGCGGCGTTGGCTACGGTAGGA TACAGTTAAACCAATCAATCTCAAATGAATAAGTAAGGAGTTTATGTTTC ATCCTTTTTGAAGACTATTAAAATTGAAGTTTTCCTGGAATTTTGATGCT CACTTAAAAAATAGGGTTTTTTTTTCACGTGCAATCTTTTAAGAATTTGG GTTCAGTTTTTGATGACTGAAATCTCTTCGCGAATCCCACACATGGTATG TATACATTCTAAAGGTCGTAGCTCTGTACCGAAAAAGGTTTGCAGATTGC GTTGATGATTTCCATCCTGATTTGGGATGAAGATAAAATGAACTTTTGAG CGTGGTAATTGGCTGGAAACATTACGTCAATCGTAAACATCAACATCTAA ATAAACGTCTCTACATTTTCCAACATGAAAAATAGCGCAACTGTCGAGGG AATTTATTATTTTACCATAGGAAATCGAGCAACACCAGGAACAAGAGAGA CTCGAAAAAAAAGAAATTACAGAACTGAAAAAACACATAGCGTGAGTTTT TTTTTATTTGACTTAATTTTATCCAGGCCAGGTTGTAGCTTGCGCTAAGT ATGCAGTTGAGCTATCACTGGTCAGCTCAGTTGGTTAGAAGTGCGCGTTA CAATACAATGTTGAATCACGATGCAGGTTCGAGCCCTGGTGACTGCTATT GAAACCTCATCAATGTTCTTCTGGGAAATTGAGGAATCAGAAAGTAGCAC ATCTCGACTTTAACTCAAGGAGCATCTAAAACAAACAGAGGTAGTCTTTG CTGGATGCAGGCCCAGACCAAAATTATTATCGATGACATCTTGTCTTGAT GTCATTCTTATCTAAGGGTTCCCTATTGCCACGACATGTAAAATGGAAAT ACTTTGACACCATCATAAGATTCAAGCGATCTAGACTACACAATCGATTT TCGCCTGCACAGTACATGCCGAACAATGACTCAGTAGCATAGGTCTTCTG ACGAACTATGCCCATTTCAGAAGCTCTTTGGTGTTGCGTTCTGCATTGAG GACAGACAATCTTGTGTGGGCCCTGATTTGATCGGACCATCTCTTTTGTG GTCTTCTCTTGGTGTTGTTTTTGCAAAATCTTGCTTAAAGCATTGGTACA CGAGTGACGTGTTGGGCTTTCTACATACATGTCCGAACCATTTCATCCGT TTGGATTGATCACTTCAACAATCGTTTTTTCTGACTGGGTCGTTCTTCTT ATGACGACGTTTCTGATTCTGTCACGCCTCGAAACTCCAAATTATTGACC TTAAGGCATCTCATTGAGTTATTTTTCTTCCCATATTTCTGATGCATATT ATGGTGATTGGGAGGATGAGTGCACGAAAAAGTCCAATTTTTAGTTTAAG GTTGATGTTTCGTTTACTTCATATATTATTTCGCAGTCTTCCTAAAGCTG CGGATGTGAGGGCGATTCTTCGGTCAATGTCAGCTTTGATGTCTGGAACT GAACTCCCAAAGAAAACGAAGTTACTAATGTTATCGATATTATTTCCTTG GATTGTGATTTGGTTTTGTGAGGGAGTTAGAACCTTACATTTGTCAGTGT TTACTTTCATTCCCCATTTACTGCAGGCATTTTGTAGCTGTGATGTTAGT TCTTGCAATTTCTGGAAACCAAGGGCGAGGAATGTTGTGTTATCTGCATA TTTGATGATGAGAGCGAGATAATTGTCGTTCATAGCAAAATGTTGGGGTA TACATCTTATTTCATTGACGACGAACTCTATAAATATGTTCAACAAAGTT TCTGACAACAAACAACGTTGTCGAAGCCCATTCAAAGCACTAAACGATTT TAAGTTTCCCATCAACAGTTATTGTACATTCAGTATTCTCATAAATTTTC TTTATAATGTTTACATACCTTTTACTAATCCCGATGCTCGATAGCATCTT CCGCAGGGCTTCTCTCCATATCGTATCAAATGCTGATTTAAAGTCGACAA AATTAAAGTGGACATTGTGTTCCTTAGCTTTTTCAATAATTTGGCAGGTT ATTAAGATGGCGTCTTTTGTTCCTCGGTTTGGTCGAAACCCAAATTGGTT ATCATTAATGAAGCCTTCGCTTTTGGCTCAGATAGGGATAGAAATGATAG ATATTGCACGGTAGTTTGTTGTCTGTACAGATCCAGTATATATGGCTAAT TTCAAAATTAATTGCCGTAGAGGGTCTGTTGTCATTGTCTTTTCAAATTG GAAATTTTTCAGACCGACCGCTGCAAACTCATGCAGTGATCGAATCAACT CCAGGGACCTTTCTATTTTTCATACTGTTGATGCTTTTTCTCATTTCCTC AAGGCTGATTGGTTCAGGATTAATTTCGTTTTCGTCTTTTGGGTGAAGTT CATTTTTGCATCATTGTATCATTGTCAAAAGGGGGATTTTGCCGAAAAAT CGTATGAAGAAAAATCCTCATGATTTATCCGTCCCAATTGTTATGATCCA ATTTAAATCTTCAAAAACCTATTTAATTGCCTTGGGAATTGATTATAAAG TTATATGAATTACCGTTGCATTGTTGAAATCCCAAGTCCACACTTCCGTA TACACTGTTGATACCCTCATTGAGTTTCAAAGCGAAGTCTAGAGAGGAAT CTTCAACCTTTCCCATACCAGCAAAAGTGATGCCTTCAAGATTAGCGCTG GTACCATAAAGTTTAGACTAAATCGCAAATTTTTCTCTCGGCAGACAACT AAAGACAAGGGAAGCACGAAGATTAAAATTGTTGAGTCATCCTACTGAAT GTTTTGAAAAGTAAGTGTCTTTTCTCTGAAAAATTGCATGCACTGAGACA GGAGGTACAAAGTTGGGACCAGTGCTGAAAGTGTTTGCTAACTAATTCTT TGATTTGTCAAAGTACTTACCGCCTCAAAAAACACTTACTTTGTATAAAA GTTTTGTGAAAAGGGTAAAATTAGAAAGCTCCGTGCCAAAAAAAGTCTTG AATTTTTGTGAGACATTCTACTTACTTATTTTTATCGACCTTTCTCATCA AACAAAAATGTGTTGATCATGACTACCTGTTTTGTAAAAACTTTCACAGG GTACTAATTTAAAAACCAGTTTTAAAGCGAATTTAAGATCTCCTATCACC CTCTTACCAGGTTATATTTTATTTTTCACTTAAGATTTTTGAACACATAC TTTAGACGTACAAACTTTTGCGAGCAGAAACTTTCGCGATTTTCGCGAAT TTTGGCCTTTCTTCGCGAAAGTAAATGTCTTTGAAAATTCTTAACAGGGC AATTCGCGAAATTTTATGCTCGCGAAAAACTATAAAACCTCGAAATCGTA ATAAATATCAAATTTTCATTATTATCCTTTAATGCCTTTTTAAAGTCGAA GAGCAACCGTCTCTAGCGGATTTAAGGAATATTTTTCATTTTTAAGGCAA TTCTTGTTCGAAAATTCTCATTTTTATCCAACGATTCGCGAAAGTTTATG CATGTATTTTTTTTTCCAGATGTATACATTTTTTCCTCAAATTCGCGAAA GTAAATATCGCAAATTTCGCGATTTATCGACCTCGCGAAAGTTTCTGCTC GTGAAAGTTTGTACGTCTAAAGTATCCGCAGCAATGGTCGCTTCAACTTA CCCTCTGAGAGTATTAAGTACGAGTTTTTTTGTCACCGACAAAGCCATTC TTTGATTTTCTAGCAGGTATGCTTCAAAGCGTAGAATCCAGGTCATATCG GAAAAATTCCTCAAATAACGTTTTCAAATAGTAAAAATCAATAGACCTTC TCGGAGTTTTTTATTTTTCTAAAAAAGCGATGTATTGTGGGATTGTTTCA AGTGTATTACAATAGAATTCCCTCGAGGAATTCCTAAGAGATTTCTATTT TAATACACTCGAAACAATCCCACAATGTATCGCTTTTTTAAAGAAATCAA AAACTCCGATAAGGTCTATTGTAGGTGACACTTCTATTATTAGTATGGTT CTTGAGAAAGAAGAACACGAACTTAACATCCCCGATCGTCTTCTTTTTAG GTGTAACCCTGAAAGTGATATGGAACTTTCCATCCCTCTGCAAAAAGTAT GATGTTGATTACTTGGGGTTTGATGGCCTTTTACAGGGGAACAATATCTA TTCTTTGCATGTGAACTATGGATGCTGAGCTTCGAGGTGAATATGTGAAC ATCGACTTGCATAAAACAATGTGTGATTGAATGTCTTCCAACATTGTATA CGATTTGATTATCTCAGTGGCAGAAGTCTTTAATCAACTTTTTTAAGATT TAGACCTCGATTTATTTATTTTAAGGAAAAATTTGTGAATATTTTTATGG GACATTTTATTTTTGAACCATTTTTCAATTCTATAGATTTGTATAGTATT TTTCGATTCCAAACTGAATTATTCTTACGAAATGTGTGTTGATATGTTTT TAGAGATGAGGAAAATAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073823TCONS_00073823Clytia hemisphaericatranscript
TCONS_00073822TCONS_00073822Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073822-proteinTCONS_00073822-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_98supercontigscaffold_98:66078..75746 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
C20orf96uncharacterized protein C20orf96 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.19 16.68 8.27 6.4 17.74 11.82 10.65 10.03 7.71 8.11 9.29 7.52 2.54 3.73 4.32 4.71 4.28 5.24 3.4 2.54 2.34 2.07 8.59 6.65 35.45 30.08 6.77 7.03 3.25 3.16