XLOC_045835 (gene) - C. hemisphaerica

Overview
NameXLOC_045835
Unique NameXLOC_045835
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_98:179572..183281+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045835 ID=XLOC_045835|Name=XLOC_045835|organism=Clytia hemisphaerica|type=gene|length=3710bp|location=Sequence derived from alignment at scaffold_98:179572..183281+ (Clytia hemisphaerica)
GTCAAGATATGATGAAGGTTGAAGGAGGAGGTGGTATATTTAACCTTGTT
ATGAATACATTTACATTACATTTATGTAACAGGTGAATGGGACGGTAGTC
CAGTTGGTTCGAGGTGAAGAAGCTCTAGGGTAAGTGATTCTATTCATATT
GCTTTGCGTGCTCTAAAACGGCCAAATATTTAGGAAGTTTGCCTGAAGTT
TGCCTGTTTGCCTACATTTTCATGCTTACAACTCAGAAAGCTAGGAACAT
CTAAAGTTCTCAAAGACTTCACAAATCCCGGGgagagggggtactagggc
aaaataggTTACAgggatgcgccgctggtcagggttgtaccttttttaac
ctccgcgagtcccaggtagggttgcaaaaacaccaaaatagaaaaatcag
ccCCTCGCAGGGTGCCTTTTTGAAAGATttagggaaaaagtagaaaattt
tagaaattttttggaatttcagcctcattcagggtcactttttcgcaaat
ttgggcaaaatttttgaaaaaatgagtcccacgtagggGTCCACTTTTCG
AACCTCAGCAGAGCAACCCTGTcggtgtgtgtgtgtgtgttttagagtcc
ataaaggtataatatgttcttaacttgttcataatacagtttgttcttat
taaaacaattattttgactGAGAAATGATTACTCTCGTATAAAAAGTacc
cataattaatttttagtttcatcAATATCGTGAAGAATGAAAATGTTACA
TCTTGCCCTGATCATAAATATGCTGACGATCATGCATTGTCAGCGAAATT
GTTTACACAATGGATGCGAAATGTCCGGTGGGTTAAAGATGGCGGACATA
AACTCCACAATCGAAAAAACGTTGGGTGACaggaactttaaagataacgt
CTTGTCAACTCTCAGCTGGAATATCGAGCAACCGATAAcgtcattttcta
gacaaaaTATGGCGGATATTTGTCACGTGATCAATAAAGTTGCACCAATG
GTAAGTAAAGATTTTGTACAGTCCTTCTTACTTAATAACTACACTCATCT
CATCATATTACAACCGTAGAAAATTACGACACAGTCTCCAAAACAGCATG
TAAATAAGGCTGATGAAAATTTAAGTTTACTCACATACTGACTTTTAAAG
TCGCACCAGGAAAATTTGAAAGAGCGAGGGTCATTAAAGAGTTGAAAAGT
TCTCAAACCAGATTCCACTGAGATAGATGGGGGGGGGCAGCTgagcaaaa
ggaccgacgggtatgtgcgggtcctaagggtaccttttccaatatgttta
aaatgcactgtaaggatcggaaaaactagagatgcactgtaagggtagaa
atttcagaaaattcttgaaaaatctagatattttgaccaaaaatgctaga
attttgaccaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccc
cccgggggctcCCATGGTTTCTACCGTGAGATCTGACTTTTTTAGCGCAC
ATACCAGAATAGAGGAGCAAAAGGAAGAGATGATGTCTCTAAATAgatac
attttcaatttttaacgtAGTTTGCTGGCCTACAAAGCACGAGCGAAGAA
CAACGGAGAAATCTAAAAGTGTGTTTACACCAGCACTCTATCATCGGCGA
GGATTCAGATAACAATCTCCAAAATGTCATCCTCTTCAAACATAGTCGAA
GAATTCTCATCAAAGATCATGGGAGCTTCAAGGCTAGTAATTATGATGTT
GCGCTTAAGCAGTCTAGTACCTGCACGTGGGCTAGAGTGCAGTTCGCCCA
CCGAGTACGAGGATTTCCAATGTTGAGATTCTCAGGAGCAGATCAACCTA
AAGAAAACGACGTCGAAAAATTATTCGGTATCCTTTCCTTACTTCTTCCG
CAAAACCGACGACGTAGTCGACGTGACGTCAAATCGCCGTACCGTTGGTC
CACATTTTACGTGGCGGTTATGAAAATACATAATGACGATGACGAAGGAA
TGCTGAGAGAGGAATTCAGATCGCTTCTTTCAAATCTAAGAAACAAAGTA
ATGAAAAGACGCAGATTTCCTTTAATCTTATTGGTCGATTTAGGAAAAGA
AGACAACTCATTGGCTTATCAATTGATCAATGAGCAATTTTATTGGATTA
AAAATACAATGGCCCACTCCATCCTCACTTTTCCCGCCatgacaaaaaca
aacaaagaagacAGATCCAGTGAAACGATGAGTGATTACGTCATGAAAAA
TCGATTTCATGGATTGGTTTCAGCTGTTctcactgatgacgtcattaagg
GGATTTCGAATACAAGGCCTGTGTTTGCGGCTATGATGAGATATCGCGAA
AATAATTCAACTTAAAAACTCTGAACAGTCATATTACCGTGGGGTTATGG
ATTGGAAAGTTTAATTGGGTGTAAAATAAACGCTCAAAATCAAAACTGGA
ATAGAATATCCTAACATCACAGGACACAGTTGCTTGTTAATTGCAGGACG
TATTGAAAAATCTTACCCCTTTGCGACTCATATAATGTAAAATATATTGG
ACGAACAATAACTTCTaattaaataaatatttaaatagggtttatgtatt
ttttttcaataatgttaattaaaattttaaggttaatttcatttttacat
CTTCTAATCTAATATATATTTCTAAATTCAAATAGTGAAAGCGACAAAAT
AGGGAGCTTTATTTGTTCCTGCTTGAATTCTGGTCGAAAGTCTGTATTGA
AAAGTGTCTCTCCTGCCTCGATTACTGATGCAGATTTGATTGGGGCTCGA
TTTCCCAGGCTCACATTGCTTGAAGAGACTTCTTCTCCTTGGGTAATTGA
GAACAGTGTCAAATGAACCGATATTACCTGATAGGATAGCGCGCGTTCGT
CTCCTCTCCATCACTTTGAAATAAACATAACGAAGGCAATAATAGGTTTT
ACTTTGGACGTCAGCGCTTTGTGCAATGTCGGAGTTCAGAAACAAGACTT
TCTTGAGGTAGAACTTCTTTGGTCGTCCTCTGTTACTGATTTTTCGATAG
GTTTTCTTTCCGGTGAGGATAGCAAATAGGTTATGCGCTAAGCTTCTCTT
TATGAGGCGTGGGCGGCGACCGTTTGAGGGCTGAGTGACATGGAGTGAGA
GTTGCACCCAGGAAAGGGATTGACATTTACCATCATCGGGAGGAGTTGCA
CCAGTAATGAGTCCTTTCAAGATAGTGTTGTCATTCCGGTAGAAGATGGg
attgaaagtttttgaatcaCTTGGAAGACTTGATGAATTGAAAAGACGCA
GACAGGTTTTCTTTAACTCGTCCCATTTCCCTTTGGTCACGTGCTGTAAA
TTGACAACCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073796TCONS_00073796Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073796-proteinTCONS_00073796-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_98supercontigscaffold_98:179572..183281 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0 tpm) - - (23.15 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09	0.09	0.07	0	0.12	0.05	0.14	0.19	0.22	0.18	0.36	0.21	11.77	10.5	0	0.03	1.38	0.13	23.15	21.58	18.73	23.13	1.99	3.29	3.17	2.81	0	0.36	3.33	2.58