XLOC_045738 (gene) - C. hemisphaerica

Overview


Name	XLOC_045738
Unique Name	XLOC_045738
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_97:337957..346623+

gene from alignment at scaffold_97:337957..346623+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_045738 ID=XLOC_045738|Name=XLOC_045738|organism=Clytia hemisphaerica|type=gene|length=8667bp|location=Sequence derived from alignment at scaffold_97:337957..346623+ (Clytia hemisphaerica)
AGAAACTTCACCTCACTCAGGTGGAACAACTATAACTAGAAAGCAACAGA
CTTCAAACAGACTTCAAACTATCAActcataaaaacaaaaaattctttca
agATGGCTGGCGAGAGAccaaagagaaaaaatttgtttatcggAAAATGG
ATTCCACAAGACAGAGTAGCTGTCATGAAATGGGCTAAAAGAAGGCTCGA
GGAGTATAAGGTAGGTTCGAAAAGTTAATTAAAGGAATTTTGTTCCAAAA
ACTGACATTCTGACCCGGAGGGgtcactgaccttgacggccgacccCCCT
atacggccgacggggacgtgccgctggagttcgAATAGTTGACCCTGTCA
GTtatgaatttttggtaaaatggtgaccttgtcagaacgaaaaatttatC
ACCTGCCTAAGtgcccacccccccccccccNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCCCCCCCCCCTAGGCATTCtgatatacagt
ggagtcttcaTAACTTGAACCTCTACAACATgaatgtttccttaactcgG
ACAAATTTTCTGGTCTGTTCAGTTGACAATGCCTTCTAAACcaatctcta
taactcgaaattttcttaattcaaaCAAATATGTGTtacccgtgcgtgtt
cgagttatggagacttcacCGTATTGACTTCTCTTGGTGATCCTATCATC
TACAGAAGGTCGCTATAAAAGGGAATAAATTAGGAAGcaagataaatttg
aaaaacggAGGTAAGCCCGCGGGAGTAGAGTAAATAGTCACGGAGGTGTT
TAAAGTTCTAAACTCTACCGCCGCTATTTTTCCGTCTATCGCCCGTTGCG
ACTGTAAACTCCACGCATACATATTTTCCGCGTTTAATATCTCTCTAACG
GAGAATAGTACTAGCTGAATCTATATGAGTCTATGTCTATGGATTCTCTT
GAAGGAggtgtactcttaggttccaaataaacggggggggctggaaaatt
ttccaaattttaataaacgggggaacctaattgccgggggggttgaaaat
tgtacttgcaaaaacccaaaaataaggtaaatataggctaaaatcaggct
atttagagcagaataagggaccttctctttgaaagctgaaaaaattctta
aaaaataataaacggggggtcctaataaggtccgggggggttggaaaatt
ttcgaaaaattaacaagcgggagggcgtttatttggaacctaagagtaat
ttaTTGTGTTTGAGCGGAAGGCATCATCTTTTCGGAAATTCACACTCTAT
GTAATGTCATATAccaagaaaaaaagataacaatTCAACTTTATATTACT
TATCTAGGTGACACATGCAGAACAGTACGCAAAATTGATTGCATTGTTCC
CCGATACACATTCGGTGGATGAAGAAATTCAAGTCTTTGCAAGAAATGTC
AGTAAAATTGCACCTGCCACACTTCTCTTACCGGTTGTCAATGATTTGGC
TGAAGCAATGGGCAAGGAACCAGATGTTGCCATGGTGAGTATATTATACA
CATTATACACAATTTTACACATTTTGGGCCAATCAGGTTCGTGTATTTTC
CATcagaccaaatttcagccattttttgaaACTACACGGACGAAAAAATC
CTGTATTACAGATCCCATGGACCTCTAAGCCACAGGAAAGCAATTTAAAA
ATGCTCTGAAATTTCATCTTTATTGGGAAAATACACTTAGTTTCAGTCGG
GAATGGAGGAAAACATTGACATTTTCCCGGGGgagcaaatttgagcaaaa
aatcgacccttacgtagcttgaccattttcaggccaaatatggtcagatt
ttcgacattttacacCCTGAGAGTgctatttttctcatttttgctcaTCT
CGACCCTTActgtgcactttgggaagcttggaaaatatacccttaagggc
cgcacgtacggtaggtcgtttaccttgagtgcccccccccccccccccgg
ggaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccccc
ccccctccggggGTAATCCCCTTTAGATTTTACCTCCTAAAAACTTCTCA
CCGGGTCAATGAAACTCACTGAATGTCAGACAGGAGAAATGTATGGTGAa
atcactgatctttgtttaGACCCTGGAGGCagtcaatcccggccaagcaa
ataTTTTGTgcagagtttttttgaaagtagtACTTGCATCGAGGGCGCTA
GATCTACTCTGCATGCAATAtcgatgtagcgccgtttgtagTTAGGTAAA
ATTGTggcactacaatggcttctttgcgggtgccactttcaaaaaaactc
cgacaAAATACGGTAGATAGCTTTggtccagggtttataaaggtcagtgg
taaaaccaacaaaacatttttccatTCAACTCCACTCAACTCTAAACAGG
TGATGTGCACAATGTTCAATTCTGATGCTGAAATGAACGCTCGTGATTTC
TTGTTTTGGTTGAACATCACCATTCGACAAGCACCAAGATTCATTGAAGA
TGAAAGTGAGTAAACCTTCTTCTCTTCTAATGGAAACAGTTGGATCGGAA
CACCCAACAGGCAGACAACGTTNCTTCTCTTCTAATGgaaacagtttttt
taattatagATAACCCGGGACGGGTACTTAGGAAAAAATGTGTGCTAGGT
AAGGGTTGGTTTTTTCACCtctcaaagtctctctaagggtcgtaaaaatc
agaaaaattaaattagcctctttaagggtcggaaaattcaaggttttgag
gattttttttatttagagtgaaaaaaatggtcactttttagtaaaaatcg
ctcggtttttggaggtcccatcCGCACATACTCCTCATCtggccaaccct
agtaccccccccccccccccccgNgaggattttttttatttagtcacttt
ttagcaaaaatcgctcggtttttggaggtcccatcCGCACATACTCCTCA
TCtggccaaccctagtaccccctacCGGATAGATAGCCAAGATTTTTACA
CAACATTTTTAAACATAAGAGCagaaagaaaaactttctcTCCTTCTACG
CCGTGCAAGCATGAATGTtgagaaatttaatttattcctCGACACTTTAG
GGTCAAAACTTCGGGTTATCTCAAATCAGTTTAGTCACTTTAGCGTCGTA
ATAATGTAGATACATGAACTGATTTATAAACTATCAGAAAGACAATCTAC
AGGGTCGCCATCAACGGTTATGGTAGGCTGCTAACactattgagtttaaa
gcctgaaggactagagtagaatctctaacctttccccaggcaagaaaaag
tgaagccacttatttcccatccagaacgcgcctagaacgcacCACATTCA
TGACGATGGATTGTATTTAGTagttattttgtttttgaggatCATTGCAT
TtcagattttactttcaatccggcgtttgtgtaaagaCCACgtgcgggcg
ttctggatgggacataagtggcttcatttcctacccacaggagtctcgag
tctagcccttcgggcttggaagtcaatggacCTACTCGGATCcgtgctcc
ttatagatataaacatattcttttgtCGAGGTCTTCGATTCAGCCTTTGG
CTATTACAGCTATCTCAGAGTAACCAATTCTCATTTTTTCCACTATAGAT
ATTCAGATCCCTGTCCCAGTTGGAGCTCTCTTGACATGCGCAATGGGAAC
ACCTGGAGGTTTCGCTGGTTTCATCAAAGACCGAATCAACGAATTATTCA
AAGCTATTTTGGACGATTATGGAGTATATCTGACAAGTTATGCTTCAACT
GACGTCTTAACTACAGATCCAGATGTCGTTGGTGAGTTGACACTCTACTT
GGTAGTATTAGTTGAAATTCCATTGTATTGTATGAAGCCTGAAGAGAATT
CCCAACAAGCTGAACTCTGGCATTACTGTTTCATTGGGAGACATTCTCTT
TTCTGACCGAAAATTGAGATGCCTTTTCATATAACACCACAAGGACTAAA
CAAGCGTTCTGATATCACTATTTTGTAGTTATCTTAGACTTCGTAGGTAG
ATGGAGTAGGTTGACTTTTATAAAATTGCGAATCTGATTTTTTCATGACC
CATGAAGAGCAGTAGATTcagcacccccccccccccaacNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcggatg
ttcttagttttttggatttgaagcctaaaaatgttcttaaaatgttctta
ttttcagcattttttgatcattttgatgtaatttcttaagaaattgcata
tttttaaGTCttcaaagccttagtatgttcttagaatgttcttaaatttt
tgggcctcgaagccttatgttcttatatagtttgtccttataaaaaaaac
gtgtattcgctTTAAGTGCGTATTCTTTCTTCCTAAGATATGGAACCACC
CTCAACGGAATTAGTTTAATACATTGATCTCAGTGCAAATGTGAAACATG
AAACCAGTGCACACCTGAAGCAAATAAACATATTTCCATCCGACAAGAAT
CCCGATAAGGACAAAATGCATAAACCTAATCCCAATACCATGAAAGAGGA
TGAATTTCCTCACATTTTTTACACGtatcttcattttccttttaggTGGT
TGGTTTACTCCAGCAGCTTTGAATGAGATGCCAAACTTTGATGAAACCTT
TGTGTGCAACCCTGATGCTGCTCATTACGGCTACCGATCATTTGACGAGT
TCTTTACACGATACCTGATCGAAGGACCGGATGGACGACGTCCTATTGCA
TCCCCGGATGATGATATGATCATTGCAAATGCGTGTGAAAATGCTCCCTA
CCAAGTTGCATATTCAGTTCAAAGACATGATGCTTTTTGGATCAAATCAC
AGCCATATTCATTGCAATACATTTTGAAGGGAGCTGAAGAATACATTGAA
AGATTTGTTGGTGGGACTGTTTATCAAGGATTTTTGAGCCCCCATACCTA
TCATCGTTTCCATGCCCCCGTCTCCGGTGAACTTAAAGTTGCTaaggtaa
cgatgaagtaataTTATTCGATTTCATTTGTCCACACAAATAAGATTGGC
CTTTCCTTTATTCATTTATAAGGTTTAATATGTGTTAAATTGCCcggccc
gggggggtactacccttgtcgaccgacgggggtgctccgctgaggttcga
aaaatggaccctacgtgggactcgaaatttacgaaaaagtgaccctgaat
gggtctgaaattccaaaattttctcaaattttctactttttccccaaatt
ttccaaaaataggcaccctacgagggactaatttttctattttcgtgttt
ttgcgaccctacctgggactcgtggaggtaaaaaaaggtaccccgaccag
cggagcatccccgtaacccatcttgccctagtacccccccccgggttgcC
CGGTAGGGTACTaggaggtgacgggtatgtccgagccaaaaattgaaaat
caacccttagagagacttttctcgattttttttcgattttcactcgattt
ttgtccaaattttggaaaatcacgaccctttgagaccatgttcacacgtt
accgttccgtttcgctccggtatgattttcgttacggatcgagtgtgttc
atattggtttcggaacgtttcggagcaagaaaacggagcagttccgttcc
gatgaaaatagtggagcgaaactgtttcgatttgttttgctttgaactgt
cttcttttttgacgttttgaattttgacattcacacttgtttcggaaccg
ttttgGAACGGAACGGAACAGAACTGTAACGTctgagagaggaaattttg
aaaaattttgaacccTTTTGGACCCTTACTGagactcaattttcttttta
atggtttttgtactcctttgagagactttcgagggtgtgaaaaagggatc
CTTATGCCTCGCatatacccggcacccattttgccttaGTATCCCCCCAA
GTTACTACCCCTAATTGGGTTAATCTTTGCTCAGATGAATTGAGAATCTA
GACTTTTTACGAGGACTGAATTTCTTCAATCTCCTAGGGGGTTCGGTTAG
Aatcgaattttgaatttttcacgaggactactctcgggtacctaatagct
ggggggggcactaattaatttttcgaaaattttccacccaggacattctt
attccaacccccccgccccccccctgatttttgggaaatttttttgaaag
ttccctcttttgtcttaattctgctgtattagcctcctttttgaagattt
tccccctaggacatttttattccaaccccccccccccccccccctgattt
ttgggaaatttttttgaaagttccctcttttgtcttaattctgctgtatt
agcctcctttttgaagattttccccctaggacatttttattccaaccccc
cccccttattaatttttgagatttttttcaacccctccttattccaaacc
ccccggctattagctACCCGAAAGTATATTGTTGTCGCAAAAATTGTGGT
AAATTAATTTACGGCAAGTTTGGCCCATTGAAGGAATAGGCAGCCTTTGT
TTGAATACAAATTCATTGGCAAAACGATCACCAAAAATCAGTAATTGTTA
TCCAATATTATTTTCTCTAGGTTGTCCCTGGAACTTACTTTTCGCAACCC
TACTACACAGACAGTCAAGCTAACTACATCGCATCACAACCTTACTTGGC
GCATATGGCAACACGTGGTGTGATCATTATTGATACTAAGAATCCGAGCA
TTGGTCACGTGGCTTTCATCCCTATTGGTATGGTGGATGTGTCGACCGTT
GATTTGTCACCAATTACACAAAGAAATACCAACCAAGTTGTCAAAGGTAA
ACAAATAATAGTTTGTTATATGAACCCACAATGATCTAAATctattactt
taatcgtagaaattttagcgagactaattttagcgttttagcgagttttc
cctattttcgctaaaataaatctcgctaaaacacaccgaaacgacagatc
gctaaaatttatccacgcgaaatttctggttatattgctttgatacattt
ttatcaataggatgggtttcagtgcaaagaaatgctagaaaacgaatttg
gtcaataatgtaatacgaatattcgctaaaatttatccacgcgaaatttt
ttgaaatcgtgattcgctaaattaaatccaaaaaaaatcaagatttttct
gGCTCACTAATatgcgctaaaattagtctcgctaaaatttatacGATTAA
AGTATTCATGGTATACACAATCGCAATGTCTTCTGAAATTTCATCATAGA
ACTtgcagctgattggttgcaagtgacgtaaaatcagtcaatacaatAAA
TCACTTACAAGCAATCAGCTGTTAGGTTAGACTAAAGTGTACTTCTGACT
CAACTTtggtttttgataattttagagGAGTCCAGTGCAACTACTGGTAA
AAACCGGGGTGTTTCTGTTGaagacattacgtcatgaaatgATAGCTGTA
TTTAAACGGAGAGGCATAGTGGCTGTCGCCCCTGCCTTTCGCCTGGGAGG
TGCGAACTGTTATAGTATAAGTGGTTCACTTGGCAATTGGCCTCCGCTCG
CGGGCTAAACCATACCATTCGAtaggaattgggtaccataacaAAAGTCA
AAAGGGCTCAAATTCTTGAAGATGTTATTTCCTTACAGAATTAACCTTGA
AATTGAGTTCCAGCGAAACAGCTTTATTCGCCACacatttttaactgttt
ttatcTTTAGGTTAGATCCCTCTCTACCCTTCAAAATGGAATTTATTTGG
GGAAGTTTTAATCCAGTTACCAAAAGAATTTTGAATTCTAATTCCcttga
aattctttttattaCTTTAGGTGAAGGTATTGGATGCTTCCACTTTGGAG
GTTCCTCGCATTTGTTGATTTTCGAGAGAGGAGTCGAATTGGCTTTCGAT
TTACAAGGCATTGTACCAGACCCAAATGGCAATGACTTTTTGGATGTCAG
ATCCAAACTGGCCACCGTTGTTCCAAAAGAATAGATTGTAAAATTAACAT
TGCGGTGGCAATATGTAGCGAAATTTAAATACAAATGGTAAacgttattt
tttttcaatgaaaaaattatCTTACCTAaaaattcttacttttttgtaCC
ATTTTTGTAACTTatgtgatttatttttgaatttttttttgtatttcatc
tttcattttataaaaag

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00073651	TCONS_00073651	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00073651-protein	TCONS_00073651-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_97	supercontig	scaffold_97:337957..346623 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.93	1.28	0.9	0.69	0.69	0.33	0.81	0.69	0.67	1.03	0.73	0.58	42.67	2.16	1.03	3.04	1.64	0.62	2937.14	3580.42	0.53	0.55	51.63	66.25	52.33	29.47	833.33	849.9	5.09	4.48

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XLOC_045738 (gene) - C. hemisphaerica