XLOC_045651 (gene) - C. hemisphaerica

Overview
NameXLOC_045651
Unique NameXLOC_045651
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_94:436647..446457-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045651 ID=XLOC_045651|Name=XLOC_045651|organism=Clytia hemisphaerica|type=gene|length=9811bp|location=Sequence derived from alignment at scaffold_94:436647..446457- (Clytia hemisphaerica)
GTAAAATTATAGATAAATATGACACTACTAAGAATTGGTTCGATCAATAT
CTTCTTCGTGGTTTTTTGTTGGATGTTAATCACTTGGGTGTCTACTGCTC
CCGGTATTAACCCTGTAAGTTTTTCCCTGGTGGATCCTATAGAAGCCATT
TTGAAAAGTGTAATTGTTTGAGGAAAACATACTTTAAGTATAGAAAGTTT
GACTTGCTGCAAATAATTTCTTTGAACAAGTATAAGTAGATTTATTGAAT
ATGACCTTAAATAGTTTTTTCTTCACAAAGCCCGTATGCCCCCTGTTGAG
GAGGTCCATTTTAGATCCAAAGGGGTAAGGTTTTATATGTGCCAGATTTC
CAAAGGGATATACAAAAATCTGTCAAAAATAATTGGAATTTCATTGAGAT
GACTTTTTAAATCCTACAATAAATTAATAATTTTAAAGGTTTTAAACTTT
CAAATTGCCTGGAATTCCAGGGGGTACATTATTCCATACCACAAAGAGTT
GGACCTCCTCAACAGGATGTATACGGTTTTTCTCTGGAAAGCCCAATGAA
AGCTCGACTAGAAACTGCCTGGTACTGGTACTCTTTAAATTTTAATCGGT
GATGCATTAATCTTACTACATTTCTGTTTCTGCTCTTGTTTTATTATTTC
AGTTGGAGCGCTTTTGTCTCGATTCCCCCGAAAAATGTCCGATCTCAATT
GATGAAGAAGCTCTCAAGATATTCTGTCAAATCAACACTATTAAATGTCT
CCAAGCGATGCGTGACTCAATTGAAGTAAGAGTGTGAATATTAGTTGGGG
GCGTACGCCGGACTTACCGATTTACCGTTCTTTAAAAAAGGCAGATACCG
ATCTCCCGTACGCCTCCCATGTTATACATCATTCGAAAAAGAAATCATTT
TGATATTTAGATTTTTCCGTTGATATTTGTTTACGTATTCCCATAGTAGT
TTTATTCTAATCTTTTCGTACACATTTTATGATTTCAACAGACTTTCTCT
CCCCCTCTCTTCTAGAGTTACTCTTCCATTTTTCCTACCGCGAGCCGAAA
TTGAAGGAGCTATCTTCGGAATTTTCCTCAAAAATAATTAAACTAGTCAT
AGCTTTCACTAAATGCCCCCACATAAAGATCATGTCATGCACTTATAAAG
CTTTAATGCTTTAAAGATTAAAACATTAAAGAATAATCAGGAATAATTGA
TTGATTTAATTATTGATTGATTGGTTGATTGATTGATTGATTGATTGATT
GATTGATTGATTGATTGATTAATTTATTTATTGATTGATTGAGGCGTTTG
TTTGTTTTTTCTCCTAGTTTCTTTCTTATAACGATATATGTCATGATTAC
TATTCACTAAATAGACCTTTTCTAATAATGTCGCAGACATCTTAGATTGT
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTGAAAACTTAAGCAAATTTCTTTAAAGATTC
TGGAAAAATAATTGAAATCATTGCTGAAGTGAACTTCTGACTAAATTACA
GTAGTTAGTATTCAGTTTCAATTATCAATAAAAATGACAGACAAAAATAA
ATTAGAGTTTGAACAAAAATATCAAATNCAGCGCAGACAATGAAGAGACG
CGCCTTCAGGAAGCTAGACTTTTTGAGTTTATAGCTAGCGATATACTTTC
CCTTTATGGTGTTTCTGTATAACTGTCTGTGTACCTAGTCTAACCACCNG
AATGCAGTAAACCCCGAGAATGTAGGTTTCTCATTTTTTAGCGTTGTAGC
CCTAACGATAGTTCAACTTCATAAAAAGTTGTATCAGAGCCTGCTCTTAC
ATATTACTTATCATTTATAGACATGAAATTTAAACTTGAATTAGTTTTTT
CCAACGGAAATCTGAATCAAAGTTGATCGGATACAACCTGAATTGAGGCA
TTTTTTGAATAAATCTTTTCTAAATCGAAATCTATTGGAATTAAGTTATG
ATGATAGGGTATTTTCTTACTTCTAATGAACAAACGAAATGGGAAAAATA
GTCCATTTCAAAATTTATTGTTCTAAGTCAGATATTTTGACGAAAATGCT
TGACCTACTTTTTGGGGTTAGTTGACCGNGACGTAAAAACACTCTAAGTG
AGGTAAATTATTTTGAAGACCAAAAGAAAAAGTCAACCACGTTTGGATTC
AACTTTACATCATATGCGTACGTTCATCTTTTTTGTACTTTGCCGGTTGT
TAAGAAGGNTCCGACACAAAAAAGTTTGTCAAATTATGTAAAACTTATTT
GTTGTACTTTCATAACATGAAAGTACTACCTGAGAGATGATTGATGTTGA
CATTTTGAGCTTTTTTGACGTATCCCAGACCCGCTGGGACCCCACCCCAA
TTAGAAAACTTGCCTAAGTTTGGAACAATAGAATTTCTATCCACATCGGG
ACTTTAGTAGAAATCTTTGTCCCCGTTGTGGGAAAAGTTCCAACGGGGCT
ATGAGGGAGGGGTATAGTTACATTATTCACATATTTTAACAAAAATTTTC
AACCTACAAAATAAAAACAACTTTCTTGTCGCTTCTTTTCGTCCTTCCTT
TTACTTTTCCTCATTTGTAGCACGATGAAATTAATATCTTTGTTAAATTT
TTGTCAGAGTATATTTCTGAAGTATGAATTTTACTTAGAAATTAATAATT
TCGGATGAATACTGAAATTCTGCTCCCAACAACCAAATCTTTTCACCTAC
ATTCTGGGGGTTAAAAAGCGAAAAAATGCATTTTTCAGAATAACAAAATG
CTCTTTAGAATATTGTTTTGGCACAAAATATTTCTAAAATTTGCTGTTAT
AATTAATCCATTTGAAAAAATATCAACATNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTAGCCTATCTATCAAAAGTAATGAAACTAACCCCTGG
GAAAGGATTTTGGAGGTTCAAAATTTCATTGAAAACATTCATTGTTTTTA
AAAATTCAAATCTACATCTTTCAGGTCTGATTCAAATTTCACCTACATTC
TCGGGGTGAGGTGCTGTATATTGAAATATTATGCTGGCAACAAAGTCAAA
ATTATTAGACTGTCAAATAAGTTCAGTATTTCGACTTCTGGTGATAACAA
TATTATTTATGTTTTTATCTTCAACAACCAGATTTTGGGTAGGTTGGTTC
AGCCAAACAAGTTTTGCCAATAATTTTCTTCCCTTTTTATTTTCAGCCGT
CATTATCTTACATCATCTACATTTTGACGGGAGTTGTCGGTATCTTGACG
CATTACTTGTTGCCACAGTTACGTAAACAGTTGCCATGGNTCTAGTCAAT
GAATCAGCTCATCATCATCATAACCAGTCTGCCATTTTGTTTGTTTTGAT
TTGCACAAGTAATATTGTAATCCGTGTTATATCATACACTGTTTTCATTT
GCATTTATAATACTCGCTTTAGCTTTTCAAAGCTAAATCAAAACTAAAAT
TGTAATATGTAATAATGATAATACCATATAACGTAATATGAAAACCGAGT
ATTTACGGAAGAGACTAACTACGGGGATGCTTGGGCGACAAAACAAACAA
ACACGCGCAACAAAATTTCGAGATTCCAGTCCAATATCTATGCGTGAAAC
TATGAGTGCCTCCTCGTCGCTACGCTCCTGCGGGGGCAAATATACTAAAT
TGCATAAAAAGGAGACTTTTGGGTATCTTTTGGATATTTGGGTAGACTCT
GGGTATCGAAAGTTGACCCAAAAAGAGCAGTTTATTTCAAGGCGATATGG
GGGTCTTTTAAAATGGCTGCTTTTATTGTAGTTCATTAATCATTGACCAT
GAAACTTTATTATGCTCCCGACTTGGGCTTTTTGACCTTCACTCTAAAAA
GTAGACTTTTAATTCGCTATATGTTTTTCATTCTATTGCTTTTCATTTTC
AGGATTTATCACACGATGTTCAAAATAAAGAAATCGAAAATGATGTGGAT
TCGATTGATGACTTTTATTCAAGAGGTTTGTACAAACTTTCTTCCCAACT
TGATCTCCATTTTAATGGAGGGCTTACGGCTTGATTTTCATTTTATTAGA
GGGAGATAAAACTATTACGAAAAAGTTACCCTTAGAAAGACAAAACCGGC
GAAAAACTTTAGAGAAATAGTTCTCGAATAATTACCTAACCTTAGGAAGT
AGTCTTATCTTGAACAAGGACGGTTGAAAAACTGTAGAAACCCCGCTCGT
CGCTACGAGTTATCTACTGACGCTAAACCTCGCTATTTGGCACGTCAATT
CAGACCGGTTGATGAATGGAACGCACGGGGGGGGGGCACTTGATTTCTAA
ACGACGGCATGTGCCGCCAAAGAAAATGGCTTTTAAAATCGGACCCTTAC
AGTACAGCCCGTGAGAAGTGAAAAGGTATCTTTACAGTGCATTTAACCGA
ACGTTTCTGACCGTTAAAGTGTAGTTTGATTTCATATCTTATTTTAAACG
AGCCTGTGCCGTCAACACGATATGTAAAACAAATCATTGCACTATATCAA
AAGTACACCCTTACAATGCATTTAACCGACCGTTCCTGACCCTTACAGTG
TAGTTAGATTTCATATCGTATTTTGTTGAAGCCACCTGAAAATGGGGTGT
CGTCAAAATGTGCAAATCAAATCAAAATAGGTGGCAGTCAAAACTATATA
GATACATCAGATGTTTACTGTCAGACTTGCAATGCAGCACTCTTACATTG
TATCAAGCTAAAAGAACACTCTTGCAGTGCACTGTATCAAGAGTACAAGC
TTACATATTATATATATTTCGAAGATCTCGAAAAATCTACCCTTAAGGGC
AGGACATGTCGTGGGNTATAATTCGAAGATCTCGAAAAATCTACCCTTAA
GGGCGGGACATGTCGTGGATCGGACCATATGAGTTTCGAAAACAAAAGTT
TGATAAGAGGGGATTTGCATTAAACTTTCGAAAATAAGAGAAACAAAAAG
GATATTGCAAAACTTCATTCTTTAAATACATTTTAAATCTTTTAAATCTT
CCTCTCTTGAAAGGTAACCAGTTCTAAAGTTGTGCATTGAACGTAAATTT
ACAAGATGGCATCCTTTTTCTGTACTATGCTCATCCTCAAACAGTTTAAA
AATGAATATATCGCAATAGAAAAAAGTTGAAAAACAGAAGATGGAAATTC
TAATAATATCCGTATCTATACTTCACAAAAAAGATTCACGGAAAGCCGAG
ATTTAATAAAACACCAGCCCACAGAGATTGACCAAAACGTTCATCCAATG
TTCTATAGACATCCTGGACGTTAATTCTATGTTGTTTTGATGTTCTGTGC
CAAATGGGAAAGGGAAAGAATATTTCAGTACCCAAACAATTTTTAGGTTT
AGTCAATGTGCCGAAATAAATCAATGATTAACAATAGAAAATGAAATCAT
TCACATATTTGATTATTTTTAGGACTAACGCAAAAAGATAAACATAAAGT
CAACATATGGGACGTCCTCGGTAGGTGATACTTTGAAGGTTGATAGGGCG
GGGTTTGCAATAGCCTTGCATGCCTCCAGAAATATATTATTTTAATCGAC
CGGGAACGGGTTAAAATAAGAATGTCTTTTTTGAAATCTTAAATTTCTTG
GGAAGTTTTTACCCTAGAAAGTTTACTTTTGAAGTTTTGAACATTTTCAG
TAACTCACTCCGCAACACAAATTAGTATCATAGCGTATGAAAAATACACT
GTGAAAACAAAGCTAGATTCTCTTCAACGAGAGCTCAGTGAATATTAAGG
TAACCATGCCAATTATCCAGGGTTTTTTTAAATAAGGGAACTCATTTCTA
ATTTTAAATCTAGAATTTGAAAAAGCTAAGTACTCTCCATCTTCGATGCT
TTGAATAGTAATGTAATACACCTTTTCGACCGTAGCCGCCAATTTTCGTG
CGGGCATTTTTTGTCCGTTTTACCATGCTAAAACCGTCCAGTCTTTTTTT
CACACCGAATCGATTGGATCGAGTTTAGGGTGGTAAATTAAATAATGAAG
TGGCACGCGCCTGCCCGCGCGACTACGGTCGAAAAGGTGTATTGAGATGC
GGAAGAATTTTTATAGCCTGTTTCCACAAATTAACTCCGTAAAAAGGTAA
ATTGTAGCTCTCACGGAATTTCATTTTCTTATTCAAAACAGGAGATGCAA
GTGAAAAAGATTATCCAGTGAAATATGTCGAAGTTTTAACGAAACTCGCC
GCTAAACAAAATCAACAACGACACAAGAGATTCATGACTTTATCAAAATT
AGGTATGTGTAGATGAACTAAATATAAATAGTTTGAGTTTTTTACACATG
ATATTTATCTTAAAACGACGTCTCTCTGGGTTATAATATTTGATCCCATT
TATGACAAAAAATTGTAGTTGTATGGGGAAGCAATTGATACTTTGGATGG
AGGAGCAAAATCTTCCTTTTCTTTGTCCAGGATGACGGATTTCACCGAAA
ATTTAGACAGAATTGCAGAGCTTTCAGAGTCACACAATTTTGGGAAAAAA
CGACCGGAATTCCATTATTCGGCCACCCAAATAGCAAAATATTTTCGATG
GTGAAATTTTGGCAGAATGGTGGGCTTCACGAGGAACCCGCCCCCTCCTC
CGATACCACCCAACTCTACCATCAAATACTTGACCACCCAAAAAATAGTT
CGTCACTAGTAGTCACTAGTTCATTCGACATTCGTAAAACTCTGATTGCC
AAACACGAGTCTTCGTTCTGTTAATATGAGGCAAAAAATATTTGAAGAAA
AAGGTTTATTTTGCTTCAACAGTTTTTCGCAGTTAAATCAAGACGAACAA
ACAAGCTTATTTTTGTCTGGTTTTGATTTTCTGTTTGTTTTTTGCTTCTC
TGTTTGTATTTTAAAACTGGCTAAACTGGCTTTACTTAAGGTATTTCATT
CGAAGATTTGCCAATGAAGCGAAGTGGGGAAATTTCCCCCTGAAGATAAG
AAAACCACACATACACTAAAACTGAAAATTAAAAAAATTACTATCATATT
TTCGTGCGAGAAAATCTATGTAAAAGAGCACTATTTCAGCAGTATTTCTC
ATCTACTTCTTCATTAGCCTATACACCTTTTCGACCGTAGTCGGAAAATT
GCCACGCGGGCATTTTGTTGTCTGTTTTACCACCCTAAAACCGTGGTATG
ACATCAATGTTGAATCCCTTTTTTCACAGATGACGGCCAAACCCAAAGAG
ACTACCCTACCAAATACACAGATCTCGAAATACAACTCGCAAAGCAAAAA
CAGAAGAGACGTGATGAAATGACCACACCCCTCCAGCAAGCCATGTTTAC
AAAATGGCTACTAAATGGCAATATTCCAGCAACTTCACGCAAAATCCCAT
TCCATAATGCTCATATACTGCCACGATTTACTTCAAGAAAAGACAATAAG
TGGGATAAAGCAAACGATAGAGTCCCTCGAAAAGTCTCACCAACTCATAG
CTCATTGACACGTCCATCCTTTGGTGGAAACCTTAACAGAGGAAACAAAG
ATTATAAGACAAACAAAGCAGTGTTTGCCGAGGCTATTGATAGAGCCTCT
GGAAAAGTTCCGCTAAATCATAACTCAATTAATACATTACCAACCTTTGG
AAACAAAGACAAGACAAGCAAAGCACACAATGACGAGGATGAAGATACGG
CAGCCAAAAATTCGGACAAAGATACAATGGTATGGTTCTTTTAAATAGCT
TTGAAACCCCTTTGAAACTCAAAAATCCATCTTGTTTGATCAGGACTTTT
CCTTTGAAACAAGCTAATTCAATAGACCTTATCGGAGTTTTTGATTTTTC
AATGCATTGTGGGATTGTTTCGAGTGTATTACAATAGAAATCTCTTAGGA
ATTCATCGAGGGAATTCTATTGTAATACACTCGAAATAATCCCACAATGC
ATCGCTTTTTTAGAAAAATCAAAAACTCCGATAAGGTAAGTTTATTTATC
ATTACTCTAAGGTCTCGAATAAAAATTTTCCCCCTTTATTAATTTTTGAA
AATATTTTTAGCTATCACAAGCTGAATTGCTATAAATATCCTGATTTTAG
CCTATAATTACCTTATTTGGGGGGTTTTCGGAGGTACAGTTTCTAGCCCA
CCTCTTTATTTGGACTCCCCTGTTTAGTAGATTTTGAAAAAAATCCATAC
CCCCTACCTTATGGACCTTAGAGCAAACAAATTTACTGGTCATTGTGGGG
CAAAAATATTTTGACAGTCTGTCCCCTAATCATAGTCTAATGCCACTATC
TCATAAATAAGCTGGTGGACTTCGAAACTCTACCGTGGCAAATTTTCTCT
CCCACTCTGGTAGGCTTTGTGCATTTATATTCCCCCATGTGTACTATCCT
CGTGACGTCTTCGCTCAGATGCCCATCTCGTAGTTATAAACTGTATCTTC
TTCATATTTAATTTAGAACATTATGAAGCTATCAGACGATAACGCGAAAA
ACTCGAACAGCGAAGAGGAGATAAACGATTCTGCAAAAGTAACAAATGAT
TCCTCTAACAAAGCAACCAAAATCTGGTTATACAAAATCCCTAGCGATGA
AAATTCCATAGGTGTTGCTTCAGATCACCCTATCAACTTTTTCGAATTGA
AAGAAAGGTTAGCCGGTCTTCCAAAACAAGTTGATATGAAATCAAGAAAT
ATAAAAAAAAAGGACGATGTTGAAAGTTTGAAAAATGATGAGGAAAATAC
TTTGGATGAAAAAACGATCGAAAGAAGGGAACAAGCAATGGACCGTATCA
AATAAATTTTTCAGTGAACCCCTCATATGGGGGGTACTACCCTTGCCGAC
CGACGGAGTGCTCCGCTGAGGTTCGAATAATGAACCCTACGTGAGACTCG
TTTTTTTCAAAAATTTTGTAGAAATTTGCGGAAAAAGTGACCCTATATGG
GACTGAAATTCAAAAATGTTCTCAAATTTTCTGCCTTTTCCACAAATTTT
CTAAAAAAGGCACCTCGTTGAGGTTAAAAAAGTTACCCTGACCAGCGGCG
CATCCCCGTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073547TCONS_00073547Clytia hemisphaericatranscript
TCONS_00073546TCONS_00073546Clytia hemisphaericatranscript
TCONS_00073545TCONS_00073545Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073545-proteinTCONS_00073545-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_94supercontigscaffold_94:436647..446457 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.22	0.45	1.85	2.05	7.8	5.68	3.08	7.47	10.53	10.22	0.02	0.07	1.95	1.88	27.01	40.77	3.96	3.51	0.63	1.03	1.77	1.4	0.04	0	0	0