XLOC_045305 (gene) - C. hemisphaerica

Overview
NameXLOC_045305
Unique NameXLOC_045305
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:1424313..1430619-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045305 ID=XLOC_045305|Name=XLOC_045305|organism=Clytia hemisphaerica|type=gene|length=6307bp|location=Sequence derived from alignment at scaffold_86:1424313..1430619- (Clytia hemisphaerica)
TTAGATGTTGGAAATGTACCGACCAAAAGTTCGCAAATATTCCCCAGTGA
AAACTTCTGTCTTCACTATGGGAGAATACGACTTTTATTTCGCAACTCGA
ACACTTGAAATGTAAGATTTTAGTTTGATTTCTTTTATCTGATTGGCATC
TGATTGTGGCTTCAAGTTTGTTTTAGATAACAATAAAAAAGTATTTTGTC
AAGCTTTCGAAGTGGACTGTTAGTATTGGTATACACTTTCTACTATTTTT
TGTAAGAAAAAGTAATTTTTTGTTGAGCCTCAGCTGTTCTTATTTTTTCA
GCACTTTGTAAAAAAAACTAGAATTTAAACTACATAGGAAAGACAAGAAG
TAGAGATGGAAGCTAATCTGAAATCTACTTTACATTGAGCCTTGATGAAA
CAATTTTACAAGAGAACAACGAGACTTAAAATCGCTAAAAACTAAGACCA
ATTTAAGAACAATTGTTGTTTAATTTTTAAGAACTAATAAATAAAGGTAA
TATCACCGTCTATCAAGAGTTATTGATTTGATACTTATAAAGTATATGCT
TATAAGAAAAATAAATAAGCTCGTATTGTGTGCCATCCCTTGTTTACTTT
GTAAAAACTTATTACCTAAAGGTATATCACCGTCTATCAAGAGTTATTGA
TTTGATTCTTATAAAGTATATGCTTATAAGAAAAATAAATAAGCTCATAT
TGTGTGCCATCCCTTGTTTACTTTGTAAAAACTTATTACCGAAAGGTATA
TCACCGTCTATCAAGAGGTATTGATTTGATTCTTATAAAGTATATGCTTA
TAAGAAAAATAAATAAGCTCATTTTGTGTGCCATCGCTTGTTTACTTTGT
AACAACTTATTACCTAAAGGTATATCACCGTCTATCAAGAGTTATTGATT
TGATTCTTATAAAGTATATGCTTATAAGAAACATAAATGTACTCATATTG
TGTGCCATCCCTTGTTTACTTTGTAAAAACTTATTACCTAAAGGTATATC
ACCGTCTATCAAGAGTTATTGATTTGATTCTTATAAAGTAAATGCTTATA
AGAAAAATGAATAAGCTCATATTGTGCGCCATCCTTTATTTACTTTGTAA
AAACTTATTACCTAAAGGTATATCATCGTCTATCAAGAGGTATTGATTTG
ATTCTTATAAAGTAAATGCTTATAAGAAAAATGAATAAGCTCATATTGTG
CGCCATCCTTTATTTACTTTGTAAAAACTTATTACCTAAAGGTATATCAT
CGTCTATCAAGAGGTATTGATTTGATTCTTATAAAGTAAATGCTTATAAG
AAAAATGAATAAGCTCATATTGTGCGCCATCCTTTATTTACTTTGTAAAA
ACTTATTACCTAAAGGTATATCATCGTCTATCAAGAGGTATTGATTCGAT
TCTTATAAAGTAAATGCTTATAAGAAAAATGAATATGCTCATATTGTGCG
CCATCCTTTGTTTACTTTGTAAGAACGAATTACCGAAAGGTATATTACCC
TCTATCAAGAGTTATTGATTTGATTCTTATAAAGTAAATGCTTATAAGAA
AAATGAATAAGCTCATATTGTGCGCCATCCTTTATTTACTTTGTAAAAAC
TTATTACCTAAAGGTATATCATCGTCTATCAAGAGGTATTGATTTGATTC
TTATAAAGTATATGCTTATAAGAAAAGTAAATGTGCTCATATTGTGTGCC
ATCCTTTATTTACTTTGTAAGAACTAATTACCGAAAGGTATATTACCGTC
TATCAAGAGTTATTGATTTGATTCTTATAAAGTAAATGCTTATAAGAAAA
ATGAATAAGCTCATATTGTGCGCCATCCTTTGTTTACTTTGTAAAAACTT
ATTACCTAACGGTATATCATCGTCTATCAAGAGTTATTGATTTGATTCTT
ATAAAGTAAATGCTTATAAGAAAAATGAATAAGCTCATATTGTGCGCCAT
CCTTTGTTTACTTTGTAAAAACTTATTATTTAAAGGTATATCATCGTCTA
TCAAGAGTTATTGATTTGATTCTTATAAAGTAAATGCTTATAAGAAAAAT
GAATAAGCTCATATTGTGCGCCATCCTTTATTTACTTTGTAAAAACTTAT
TACCGAAAGGTATATCACCGTCTATCAAGAGGTATTGATTTGATTCTTAT
AAAGTAGATGCTTATAATAAAAATGAATAAGCTCATATTGTGCGCCATCC
TTTATTTACTTTGTAAAAACTTATTACCTAACGGTATATCATCGTCTATC
AAGAGTTATTGATTTGATTCTTATAAAGTAAATGCTTATAAGAAAAATAA
ATATCCTCATATTGTGCGCCATCCTGTATATCACCGTCTGTCATGAGTTT
TTGGTTTAATTCTTATAAAGTATATGCTTATAAGAAAATAAAGAAAAAAT
CACAACTGTGAAGCTAAAGACACAAAGGTATATGACGTAATCCAAAGAAA
ACCCGCGAAAATTGTCCGTGGTTATACGAGCGTGTAATTTGTAAATTAAA
TTTAGTGAGTTCGTCCACCGTATCGAGTANNNNACCGTATCGAGTACTTT
CGTTTTCTAATTTTTTTTCCGATGACACCAACACCGCCGCCGCGAAAGGC
TATCGTAATACTTTCGCTAGGCGAAATTAACAAAATTGAGTTGTCTTAGG
CTTAGATAAGCTTTTTAAATATTTCCCTACTATAGGGGAATATTTGTTAA
AACGGCCTTTTTCCGTCTTTTCTTCCATTTTCGATGTTAATGTTTTCTTT
ATTCGTGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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GTTGGGGCTTTAGGATAATCTGTGGGGTTCGACTGCGACTACAATCTATG
CTCTGAGCTATTGGAGGAAATATTTAACCACATCTTTGTGGCTCTTGTTT
ACTGATAATTTACTGAAAAATGAAGCCTTTCCTGATTTATCATGGATGAT
TTTTCTTAAATTTAATGTCTCGTTGTTGTTACAAAACTGTTCTGATAAAA
AAGAGAGTATACTGTCGCCAAATTAGTTCAGGAGCTGTCTTATTTTTAGT
TTTTTTCCTATTTTGACCTATGGAACTTCAAAACCAATTTTTTTTTGCCA
AGCTGGCAAAACTAGGAGAAGTATTTTCGTTAGGACATTGAAGGGAGGAG
GATCATTTTGGCTTAGAGACCCTTAGAAAGTCGATTGTGGCAAAAAGGTT
TACTGATGGTTTACTGATAGTAACATTTGTTAGATTGTTAAACTAGATCT
CTGAAATAGAGCCCGTCGACAATCTCTTCCAGGAGCAAATGCGTTTCGGA
AGGTACCGTCTATTAAAAATAGCTTATAAGGTTTCTATGGCTCGATCGAT
ATTTCAGTTTGAAATTTTGTTGAATCAGCGTTTGCGACCGGGTGTGGTGA
TTCCGAAATAGATATATTACTTGCTTGTTAATATGGGGGTTTCTTGAACA
GGGACACACGACCACAGAATATCACAATAACCGATCGATACAAAAACCTT
TTTGAATTTTTCACCTTTTAGAACTCCAGTAAATATGGACGAAGTACTGA
AGTTCGAAGATGTCATAGAAATAGAAGTACCTCCGGAAAAACAAAAAGAA
CTTATCTTTGAAGACCAAAAGATTCATGGGGATGAAAGTGAAAGTCACCG
ATCAGATTCTTCATCTCTTGATGAGAGTTTCCAAGATTTGTCACGTCTTG
ACAAAGAGCAACAGTTAACAGCTGATAAAACATCAGTTTCTCGAGAAGGA
AATTCTGATGGTAACAAACCAGAGATGATAAACATTCAAGAGCAAGAATC
TGAGTCTTCAATAATCGAAGAAAAGGGGAACTATGACACGAAACATGAAA
TCCATACGAGACCAATAGATGGTAGCAGACCTATCGTAGAAGAACAGCGT
AATACAGAAAAGCAACAAAATGTTGATGCAAAAACATCACAATCAGGTGT
AGATTGTATTGATCGGGAAAATTCAGCAATCAATAACAGTGAAGACGTTT
GTGAAAAAAACAGTGCATGTGATAATCCACCAGATTCAAACATTAGTGGT
TGCAAAATGTCGCCACAATCTAATCAAGTTCTCGATGGAGACCGTATAAA
AGCAGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073088TCONS_00073088Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073088-proteinTCONS_00073088-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1424313..1430619 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	24.9	7.11	0	0	0	0