XLOC_045285 (gene) - C. hemisphaerica

Overview
NameXLOC_045285
Unique NameXLOC_045285
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:826455..830221-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045285 ID=XLOC_045285|Name=XLOC_045285|organism=Clytia hemisphaerica|type=gene|length=3767bp|location=Sequence derived from alignment at scaffold_86:826455..830221- (Clytia hemisphaerica)
CTTATAACTGTCTCTCCTCCGTACCGGATTTTCAATCAGGTTTTGAGGTT TCATGTTAATAACCGAACAGAAAAACGAAGGAGAGCTTTTTAATCTGATG GTTAACGAGAAAACGCTATTAAGTAGCATATTACTGATAACACAGATTTT CATTGATGGTTAAAAAAGAATTTTGATGTGGCATTTTTGGAACAGGGCTT AAGCGAATGGATAACGGAATAAAGAAGATATATTTTATTTGGGACAGAAA AGAATGGTTTCATAGCTTTTAAAGACCAGGTAAGAATATTGTTTTACTTT TTGCTTCCCAATGAAGCCCTGTCAACTAAAGTATAACACACACTGTTGAT GGTTACCTACTGCTAACAACGTTGGGGTTTATAAACATCTAGGTAGACCC AGGCGGAAGAAGCAGAAACATCAAAACTAAGTTAACAGCATCCATATCCA GGTTAGAAATCTAAGAAATCTTCTTACTTTCAGTGTGAAATCACTTGATC AGAAAGACTTTTAAACGATGTCGTCTTCACCAGCACCACAAACGACTTCT ACAACAAAATCAAAATTCTTGCATATGAAACTTTCATCATCCATCGAACG CAATTTCTATTGGATAATATGGCTAACATCAATCATCTATCCTTTCTATC ACTCACACACAACCTCCATGAAGTATTTCGACCAAATCAAAGACGACTTG ACGCCATCATGGTTCGGTCTCCATAAAGATGTTTCAGATTACGAATGGAC ATTTTGGCGATCGATGGCNTCGATCTAGTATATTAAATGAAGATCAGTGG GGAAAAAACGTTCCTTAAATATAGGGTATAACGCCTTACTGATCATGTAC ATTGAAAAATATTTGAGAAGTCAGTTCACTTTCTGTTTATTCTACAATAT TTTTCGTTGGAATATGCGATAACCTTTGCTAACAATGAAAGTTCTACTCT AAATGCAAATGATAAAAAGCTACAGTATTTAACTAGCTGAATTAACCTTT GCTAACAATGAAAGTTCTACTCTAAATGCAAATGATAAAAAGCTACAGTA TTTAACTAGCTGAATTAACAAGCTATCAGAGACAAGCTTATAACTGTCTC TCCTCCGTACCGGATTTTCAATCAGGTTTTGAGGTTTCATGTTAATAACC GAACAGAAAAACGAAGGAGAGCTTTTTAATCTGATGGTTAACGAGAAAAC GCTATTAAGTAGCATATTACTGATAACACAGATTTTCATTGATGGTTAAA AAAGAATTTTGATGTGGCATTTTTGGAACAGGGCTTAAGCGAATGGATAA CGGAATAAAGAAGATATATTTTATTTGGGACAGAAAAGAATGGTTTCATA GCTTTTAAAGACCAGGTAAGAATATTGTTTTACTTTTTGCTTCCCAATGA AGCCCTGTCAACTAAAGTATAACACACACTGTTGATGGTTACCTACTGCT AACAACGTTGGGGTTTATAAACATCTAGGTAGACCCAGGCGGAAGAAGCA GAAACATCAAAACTAAGTTAACAGCATCCATATCCAGGTTAGAAATCTAA GAAATCTTCTTACTTTCAGTGTGAAATCACTTGATCAGAAAGACTTTTAA ACGATGTCGTCTTCACCAGCACCACAAACGACTTCTACAACAAAATCAAA ATTCTTGCATATGAAACTTTCATCATCCATCGAACGCAATTTCTATTGGA TAATATGGCTAACATCAATCATCTATCCTTTCTATCACTCACACACAACC TCCATGAAGTACTTCGACCAAATCAAAGACGACTTGACGCCATCATGGTT CGGTCTCCATAAAGATGTTTCAGATTACGAATGGACATTTTGGCGATCGA TGGCGTTCCTCCTAGCAGCATTATTCTCAATAAATTCAGCCATAGTATTT CTGGTTAAACGTTTTATCCCAGCAGAAAGCCAGCACCTGCTTATATTATT ATCAACATTAATTCTCCAAGGAGCTGTCATATCCATAAAAGGACTATTAG TGGTTCTATTGTTCATCACACTCAGTTACTATTTGCTTGACCGTACCAAA AGGATCAGCACGATTTGGATTTCCTCGATCATTTTATTATACATTATAAA CAACCATGATTGGAAAACCAAGCTTTTTGAATACATGAGAATCCATAAAG ATTCATACGATCTGGTGAAATTAGTTCTCATGATGTGCATTTTAAGAATT ATTTCGTTCTCGAATTTCTATCTACGATCGAAAGACCGGCAACATGATCT GGACCTTCCAAAGCTAATCACCTTTTGTCTATACATCCCTGTATGTTACA ATGGACCTATAATCAATTTCGATACGTTTTACAAAGATGTATACCAGACT GCACGACAATATTCAATCACAGAAATCACCAAAGATGTAGTATACACACT GGCAAACATCTTCGCATTGGAAATCTTTTTTCACTTCATTTACGCCAATA CCTTATGTGTATACCATGATATTCTCCAAGAGATGACAGTCTTTGATGCA ATATCCCTTTTCTGGATACATCTCCACATTTTCAATATCAAATATTTCAT CTTTTACAGATTCTCTGGTATATTTGCCAAGGTTGACGGAGTTGAACCAC CTGGACCACCGAAATGTATTGCCTCCTTATACACCTTTGTGGATATGTGG AGATATTTTGATAAAGGCCTAAACACATTTTTATTTCAAAACATTTATAT ACCGTTGGGTGGTTCTGCCCAAGGTTTTGGTAAACAAACTCTGGCCTCTT GTCTATGTTTCAGCTTCGTAGGTTATTGGCACGGAGCTGATAAATCATTA ATGTTCTGGGCCCTCACAAACTGGCTTGGAATCGTTATAGAGTCTCTTGG GACACGAATAATCAAAACAAACATTTACAGAAACTCTATAAACAGATTCG GGTGTTTGGCGCACCGACGATTGTGTGCACTGGGTGGTGCTTTTTCAGTG TTCACTTTAATTTTTNTAGAAACACTATAAACAGATTTGGGTGTTTGGCT CACCGACGATTGTGTGCACTGGGCGGCGCTTTTTCAGTGTTCACTTTAAT TTTTACTAATATGGTCTTTTTGGTTGGTCATGACTCTGCAGTTATTTTGT TATATAGGGTTTTCTCTGTTTGGCATTGCCCTCTGATTTGTTTATTTGTA TTTTACTGTGGAAATAATTGTAGTATTGATGCTAGTTATACTTAAATTCA TGATATTCATGACGTAATGTTTTCTACGGAAATGCCCCGGTTTTAGCCAA TAGTGGCAAACTTAAATTAGACAAACGTTGTATAAATTTACCACTACTGG CAAAAACCGGGGTCTTTCCGTGGAAAACATTACGTCATGAATAGCATGAA TATCTTTTTCTCAGTGCCCGGAAAAGGCACCTCCCTAATATTTGAAGCTC TAATAAGCGATAAAACTCTTTATAACTTTAGGAGGGCTAACTTTCTTCTA CTTCACTTTCAATGGGGATGAGATTGCTATCAAAATGTTCAATGGGAGTT CACTTTCAGGGAGTTTACAAATTTGGGCGATTTTCAACTAAATTTCTCAG TGGGGGTATGCTTCATCGGGTTTGTAAGCGAGAATGCATTTAGGATTATA TATATTCATAATTATCAGGACAAAAGAGATTAGAGACAAATAAAACAACA TACTGTATAATTATAATTATAATTATAATTTTCATCGCAACCTTTTTAGA ATTTCAATGTGTGCTGACAGGATTTAGTATGAGCTGTTGATGCACCCTTT TACTTTGCAGTAATCCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00073013TCONS_00073013Clytia hemisphaericatranscript
TCONS_00073012TCONS_00073012Clytia hemisphaericatranscript
TCONS_00073011TCONS_00073011Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00073011-proteinTCONS_00073011-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:826455..830221 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
HHATprotein-cysteine N-palmitoyltransferase HHAT isoform 4 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.17 21.85 6.64 4.77 0.48 0.32 1.32 0.75 0.48 1.12 0.28 0.86 2.1 2.24 1.96 2.32 3.94 3.47 2.66 2.97 4.13 3.01 14.09 12.53 1.53 1.2 0.99 1.17 5.81 6.73