XLOC_045272 (gene) - C. hemisphaerica

Overview
NameXLOC_045272
Unique NameXLOC_045272
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:381596..386919-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045272 ID=XLOC_045272|Name=XLOC_045272|organism=Clytia hemisphaerica|type=gene|length=5324bp|location=Sequence derived from alignment at scaffold_86:381596..386919- (Clytia hemisphaerica)
CACGTGTCGTTAAAGAGAACAATTAAAATCACGTGTCCAAAACAAACTTG TAAAACAATTGAACAATCAAAATTAGCCATATTTGGTTTGATTTTTTATT TTGACATGTGACATTTGTTTTGATTTTGTATCCGCTGCATACAGTTTGTT TACAAATTTCGCAAGTACTGTGATGTCCCTTTAAATGATTATTTCATTAA AAGAAAATAGTTCTAATAAAATCCACTGGGTGTTAATCACCATGGCAATA ATTTCAAAACGAGGCAAGTGATGTTCGTAACGTAATTTATGAAAAAGTCT ATTGTATTACTTTTTAGAAAATAGATATTTAGAAATTCAAAATGGTGGAG AATGAGATGATTCCACAAAACACTGGTGGTGGACCATCCTTAAAATTTCT CAGAAATCCTTCTGGTGTTTTATTACTTGTCAATTTTGTAAGTATGCTAC CTTTTTCTAAATCTATGTTTTGGAGACTTTTAGGGAAAAGTTCTGGATGA ATGACCGTGAATTTTAGCTGTTTAGTCTCTATTTTATGTTCCGTACACAG TAGCGCAGACAGAATAAGGGGCGCAAAATTTGTGTAGGAGAGCAGATTTT TATAGCATTGTAATTTTCTTTATCTATACCATGATGAATAGATAATTAGT GTCATAAAGATCTGCCCCCTGCTCTCCCACACAAATTTTGCGCCCCTTTT GGCTACGCTACTACCTACACTTTTTGCAAATATATGCATAAACGATACAA ATTCTCGAAAAGTCAAGTGACATAGTTCCGAGAAATTGAAAAATATGAAA AATTGTGAAACAGGCTTTCTTATTCCTTTTATGATACATAGTCTCCTTCG GATGCCATGTCGGATGCGTCCGGCAGTTAAAACTTAGACTAACATTTATC TCTGCAGTTTTACCTCCCTAATGTTTCTCGAGTGAACCTTTCGCTATTTA GAGGCTTTTATTTTGATAATCCGAAAACCTTTCTAATACCGCCTGACCCA TATCGGCCCGCCTGAGTGACTTAGAAACATCCTTTTTGACCTCTTCCGCC CTAGCAAATCGGGATTATATTATTACCGAGCTCAACTTCTCTACAAATTC ACGTGTAATGACCTTCAATGACTGCTTATATTTCTGGCCGCCTTTCATTT AGAGATAATATGAAGCTGAGAGACATAGCTAGAAATGGCTGAAACGACCT AGCAAAATTTCTGAAAAAATCGGGGTAATAGCTATGAGGCTACGTACAGC TTCTCTGTCGAGTTTATAAAAAAACAATACTGAATTCACATTTCCTAGAG CTTATCTCTTTCACAGTTTTTATTGAGAGAAGCTCAGTTTACAGAGCTGA AATTGGCTGAAGCGACCCAGTTAACTTTTGAGTTTGATCTGAAATTTTGT GAAAGTCAAAGTGACTTTCACGTCTTAACTGATCTTATAGCTTTAAATCT TGTGGATTGATTGCTAAGAATTGATCGTCAGGGTATTAAGCATCAGCACC AGTTGTCACGGCTTTAAGTTGAACTAATAATGGTTATTTTTTAGCAAAAA TGAAGCATTTTTCAAAGTCTTTCAAAACTTTGTTTTTACCTGCTTTTTGG TTGTTGTTGTGAGCGAAAATGAATATCTGAAATGATTTGACACCATTTAA TTATTTGCTATTCAATTCAAAACATAAAAAATAATCTTAGGGATATATAA GGCCTATAAACTCGACTATAACTCCACATCAGTATCTATTTTTTTACCAC AAGCGGTTAATTAGCGTAAAAAGCTAGTCAAAACGTGAGACAGGGGTATT GGTAGCAAAAATTTCTCATAATTTGCAAAGTACGAGTGCGATACAAGGAA CCACTCGGCTTCAAATTTTTGACCTACTTGGCAAAATTCCTAAATACGCC ACTGAAAAGATCCCATACAAATGATGTCATTTGCATGCCTACTCCGGCAG CCATTTTCATATTAACATACTTTTCAGCCTAGGGAATTTGAATAAAACAT ATATAAACGGTTTCATATGAGGAAAGACCTTTATTTCATTCCAATGAATG ATCTATATTAAAATATTATAGTTAAAGTCTATTCACGATAAGTGTGCACT CTTTTTTCATTTACCTATAACTTTTGAAGGAATTCTTCAATCTTTATAAA TTTGGTATCATTGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNCTCGCTGATTGACGTCTAAAAACGCTGTTTTCTGCAGTTTTTTGCTGT TTTTTGGGGTCAATCACTTATTAACTTTGTATCATAACTTTATATCGAAT AAATATTTTAATGAAATTTTTTCACAGTGATGATCTCCTAAGATCAAAAA ATCTCTCCAGTGAAAATGAAAGTTATAGCACTTTTCTACAAGATCTTCAT TTTTTTCTTCTTCATTTTCATCTTCATTTTTAGAATTCTTTTAAAGATTT TTTTATTTCAAATTGTTCCACTCACTAATATCTTTCCAATGATACCAAAT TTATAAAGATTGAAGAATTCCTTCAAAAGTTATAGGTAAAAGAAAAAAGA GTGCACACTTATCGTGAATAGACTTTAGTAACTGTGATAATATTCCACTC ACGAATATCCATTCAACGAACACAAAACAAAAGTTTCATGATATGCACCA TATTGCAATGTCTTCTGACATTACATCACGGACCCAACAGCTGATTGGTT GATTGGTGACGTAAAATCAGTCAATACGTCACTTTTAACCAATCAGTTGT TGGGTCCGTGGAAGACATTGCAGTGGTGCTATCATGAATAGTAAGACTTA TTCCATTGTTACTGGAAATGAAAATAGATATATTTTTTTTTCGTTTTTCA GTTAATGGTGATGATTTGTTGGTGTATATTAGCAGCATGGCGTGGCAATG TTTCCGATATAGTAGCCGATCAATTATTTAATCAAACTGGTTTCTTTTTG TTCTGTACAGTTCTTCCCTGGTTGTTCTACTTCGTCTTCTTCGTTATTCT TTTGTTAGGATGCAATGAACAATATCAAAATATCAATTACGCTAGATGGG TTGGTAGTAATTTTGTTTGAGCTGGAGTTTTTTTAAGATTTTATAAGATA CTTTACAAATTGTCATTTGAAGTAATAGAGGTGACGCGTTCTTCAGAAAA AGGAACAAAATTGCTTTTATTACATGTTGACGACCAACCAAAGCAAAAAT AACAGTTTATAAACGTTCCAGTTTGTCCCCTTTTTTGAAAAATTGTACGT CCTGTGATCTCAAATAGCTATGATTCTGTTATGCATAGTTTGAGTCTCAA GAGAAGATGAAACCTTCTCTTAGACTTAGAAAGGGGAATAATACCTTTAT CCCACTTTTTTCCTCAGTGGGGATAAAAATTCCTATTGAAATCCCAACGG GGATAGAATTTCTATTATTCAAAGGCTAAAAAATCTAGTGGGGATGGTTT TGGAGAACAATTTTTAAACATTTAATTTCTTGTGGGGATGAAATATAAGT CAATTTCCCAATGGGGCTAAAATTCCAGGGTATTTTCCTACCGGGGACGA AGTTTTTGCCAGATTTTCTAGTGGGGCTAGGATCCCAACGGGTCTGTAAC ACAGGGGTGCGAAATACAAGATATGGGGTACCAAAAGGAGAAAGGGTCGA TCTACAAAAAACCTTTTTGGAAATGATTTGTGCATTGAACTCCTTAGGAG GCTCAAATACAGAGCTTACTGGTTATTGAAGATTGCTGTTTTACGGGCTT AAATAGTCAAATGAAGCTCCTATTATTGTAACCAAAGATATATGAATGAG TTTGAATCGTTTTTCATTTCAGTTTTTCATCAACAGTGTATTGTGGGCGT TCTTATTATTCATCGCATCCTGTGTGCTGGCTGGTCAGTCGAATAAAGAT CCATGTGATGCCTACCAATGCGAACGACTCAAAGCTGCAACGGTGAGGTT TCACCTCATAGATTTTCGTTGTTTTCTGTTATACTTAAGCTAAGAAATTT CTACAAGGAAAAAAATGTTCATCATCAGCGATGCCAGCCTTCTTTGAGAA TTTATGGAATTTTGGAAAACCATTTTGTGGGTTTTTATAGTAGAGGGTAT TTTGTAAAATCGCTCGACTGTTTTGTTAGAAGCACTTGTTATACATTTTT GGAAAGCTAAGGGGTAGGGGAATCGAAATTACTATGTTTCCAATTTTTTT TCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NTTAGCTCGAGAAAACGGAGACCTGTTGTATATTTTTGGAAAGCTCTCAA AAAATTAGGATTAGAGATATATTGCAAGTATAGGTGATTTCAGTACCTAA CTAATAGAAGCTATTTCTATTTATGCTTTACCATTTACAGTTAACTTCAT GGATTTACCTGCAGTTTTTAGTATCGCTAAAATTATTGGAATACCAATAA AAATGAAGATCCAATCAATGTTTTCTTTTCATTATAGGCATTTGGATTTT TGACCGTCATCACGTTAGCTTTACACGCGTATTTCTATTACCGCGAATGG AGAAGTAGCAATGAACCTTACGAACGTGCTGGTGCTATTTAGAAAGAGGA TTGGGAACGAATTCCTTCATCATACAACAAACACATTTTCTATTGTAAAT CTTCACACGTTGTAAATTTGTGTATCTTAACTTTTGGATTTGGATTTGCC GAAACATCTTGGTTGGAAAGATAATCATGTGAAACAATATACTTGCTGTG AAGTTACTTCACGATTGAATGTATCAGACTTTTACAAATAAGTAATTTCG GTTAAAGAAGTAATCGAGTTTGAAAAAAAAACAATTTGAAATAAATATAC ATACGTTGTTTTCAAAACTGCGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072990TCONS_00072990Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072990-proteinTCONS_00072990-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:381596..386919 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
370.33 369.81 271.47 252.12 35.46 29.54 109.66 109.71 87.37 123.87 72.78 52.39 42.04 42.58 55.45 58.96 42.84 41.22 46.31 56.89 25.91 23.25 154.4 133.99 16.06 24.11 95.62 57.91 113.59 122.23