XLOC_045269 (gene) - C. hemisphaerica

Overview
NameXLOC_045269
Unique NameXLOC_045269
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:233058..240263-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045269 ID=XLOC_045269|Name=XLOC_045269|organism=Clytia hemisphaerica|type=gene|length=7206bp|location=Sequence derived from alignment at scaffold_86:233058..240263- (Clytia hemisphaerica)
GTTCAGAAGAAGGAGGGTACAGCTACAGGTGATTTTTTTTTTTTGGAAAA AAAAGCTGATAGGTTAGAAAAAGTTGTCGATTTTTGGTGATATGCAACAA CTTGTATATCTCTGGAATGACTAAATAACAAGTTCAAGTCAAAAGCATTA ACATAGGCATGGAACTAATGTTATTTTAAATAACTTAATAACTTAAAAAT AAGAAACTTATGTTCATTTCGATTTAGGCGGGACCTTTTTTGACTATTTT TTCCATTACATTTTTCAGGTATGATTTTTTTTTTCTGAATTTGATAAAAA AGTTGACGTAAAACGATGTCGTTGTAATTATTTTTTTAGAAGGTCATCTT TCTTCCATGTTTAATATACTCAACACAGGTAGAGCAGATAGTCCAAACGA GAGCTTTGATTGGGAAACTTTAAAAACAAAATTTTGTTTAACAATAAAAT ATTTATACTGTTTTTCTTTCAGTCTGTAAAATAGACATTTAAATAAAATT GATTGGAAAATGAAGTTGTTATTGCTTATTGGGTCGTGTCTTCTTGCTAC AAGTCAAGGTTTGATGTTTTTTCTTACCTATAATTTCCATTTTTAAAGAT CTTGTAGATAGTTTAAATTCACCTTTATTCTTAAGTTCTAATCATGAAGG CCTATCTTTTTAGGCAGAAATAAGCTGAAGAGATNTTTAAATTCACCTTT ATTCTTAAGTTCTAATCATGAAGGCCTATCTTTTTAGGCAGATAAAAGCT GAAGAGATAAAAAATTACTGATTCAGAGATCTAATAAGTTTAAATACACC TTTTCGACCGTAGCCGCCAATTGCCGAGCGGGCATTCTTTCCCCCTAAAC TCAATCCAATCCTTTTTTTACACCTTTTTCTATTGTCTATAGGTGCAAAA AATAGACTGGGACGATTTTAGGGTGGTCAACGGACAAAAAATGTCCGCGC GGTAATTGGCGGCTACGGTCGAAAAGGTGTATTAAGTATCAAAGATTTCC CGTGGGTTTGCTTGATGAAGTGCCAAATCTGTCTATTGATTTACTTTTCA TCTTCTTTATTTTTCTCAACAGCATCGGAATGGGATTACAATGCTGAAGG CGATAACGGTATCTTTCATTTTCATTTGACATTGAATATTGAGCATTTAC TTAATGTTCCTTGCCAGCTAGCACACCATGTTGTTCCAAGGTTCATCTTA CGTTAGATGTATGTTGCGAGCATTAGATAAACGTTGAAGCAACGTTGTGT ACCAGCTAGGCTCCCATGGTTCATCATATACACACAGTCTCCAAAGTCTC CGTTCAAAACATTAGTAAGTAGTAAGTCTGCAACCGCAGTCGGAGGCGAC CCGAAGGCTCCTCTTTCAATAGCTATCTACCCGAAGGTAGGGGAGGGCAC CACTCTTTCTCCCTGGATTTCTCCACTTACTCTTGATCCNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTCT TAATTGCTGAGCATCAAGCAGAGAGGCATCAAGTACCATTTTGAAAATCT TTGGTATGACCCGGCTAGGGGTTGAACCCACAACCTTGCGAACCGTAGAC ATATGCTCTACAACTGCACCACGGTTTGCATTAGATAAAACATTAGATTA ATAAGCCTGTATAGTGATTGTCGAATGATAAAGTTGAAGTTGTATTTGCA AAGTAACCTAGATAATTGGTCCAGCGCGTAGCAGAATGGACCTTTAAAAA GCAACTGATAGAAAAGATTTTGTCTTTGTCGGGGCCTGTGCGCGCGATAA ATTAACAAGTCCAGGCTAAACCAACCACCGATCTAGAATTTTTACCCCGC CGACCCGCGCGATGTTTGACCTATGTTTTGGATTGAATTGGTAGTAGAGT CAAATTTCTCGGTTAGATTAAAGGGTTGTTTCAGGTAGGGTCAGGTAGGG TTAGGGCTAGGGTTGGGGATGTTCTAATCATAGGTGCTTTGTATATAGTG GGTTCGAATCCCATCAGCGGCAAAAGTTTCGAAATTTCGGGAAATGCATC AAAAACTTTCAAAACTTAACAATACAAAGAAAGTGTCAAAGAATAGAAGC TCAGAGGGGAGGATGGGAAGTAATTTTTTTTGCGTCACTTAAGGAACCCG GTACGAACGACATTCGGTTATTGCCACGTCAGCTGGACCTTCACGCCGCT CCGGCTTCTTGTTTTGAGTCTAAAGACGCCTTTGAAATTTTGTAGCGGGT AGATATCGAATAAAAATCCATTTGGGTGTTCCATTAAATATCCATACAGG GGGTGGAAAAACCCTTTTAAGCTGAAAAATATGAAATTATGCGGATGCTC CCTGGAGAACTCGCAAAATTTTCAAACACCCTTAGAAAACAAAAGATTCT ATTTATATAAAATGGAAAGGTCAATTCCACATTCTAAAAAGATTATCAAA TCTTCTACAGGACCAGCTGATTGGGGAAAAAGATTTCCAAAATGTAACGA CACTGCATCCTCTTCAAGGCAATCGCCAATCAACATTGTTGTTGACAATA CCAAATATAACGCAAGTTTACCCACACCAGAATTCATCAACTATGACGTT GCACATGCTACATCTAACTTGATAATTTCGAATAATGGGCATACAGTTGT TGTTACGCCAAAATATGCATCTAGTGACTCTAAAGCTCAAATCAAATATA AAGGTAAGTTATATTCCAGGGGGGGGGGGCAATGACCTTAACAACCGACG GGGACGTGTCGCTGGAGTATGAAAAATGGACCCTGTCAGATATGAATATT TGGTAAATTTGGGGCCCTGTCAGAGAGAAAATTCGATAAATTTTCCTATT TCCACTCTGAAAAGTGGCTAAAATGAATAAAAGTAGACGAAAAATTGAAA ATACTTCTAATTTCTACCAGCTAAAAATGGTAAAAAACTACCAAAAGTCA ACCCTGTCAGAAACACATTATGAAAATCAGCAAATTTTGGATCCTGTCAG ATATCTTCAGAGCCAAAAAGGGACCCAGACCAGCGGCACGTCCCCGTACC CAATTTCGCCTAAGTGCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNCCCGTCCCCAATTTCGCCTAAGTGCCCCCCC CCCCCGGGGTTAGAGTCCTTCTTCCTTGGAACCAAGCCCTAAATCAATGC AACGTAACCATTGCGGGGTTCTCGACTTCATTGATTTTAAAGTCTGTAAG GCTAGAGGAGAATTTCTCATCTCAGAGAAAATAGTGGTACATTGTTCGAA ACCTGGTGATAGATTTTACTTCTAATTTTGTGTTTTGGATAGGAAATAAG TGGCTCTCTCATCGAAGTGATTTTACAACGTTTCATCAAAAAACCTTCCA AGGGCAACATGACATAAAAGTTTGCATTTAAGATCACGTTGTACATTTTT TATATAACCAAGTTGCTAAAGCTTGAGGATGGCTTCTCGTAAAGTAAAAG CTTTTTAGGTAAATCTAACCATGACAAACGATAACCCTTGACCCAGTAAG CAAGGTATAATACCAGGTGTGTTCAAAGCAAATTTTTCATAAAACGAGTT AGAGTGCTCACGCAGCAACCTCGGGTGGGACCCGGAAATTGGATTATTCA TTCACTTCAGACGTTTTGAGATCACTTTGGTCAAATCAAATCCTCTTTGA CACCCTTGTCTCACAGCCCCAGTTCAGCTTTTTTGCAAAGCGGGGATAAA AATTTATATATCGAAATTTTAATAGGAATAGAAATTCTATTGTTCCAATC TAAAAGAATCCAGTGTGGATGGTTGGGAGTGCAATTGAATTTCGATGGGG ATGAAATGAAAGTCAATTTCCCAGTGGGGCTGAAATTATATTTTTCCCAT CGGGGACGGCATTTTAGCCAAATTTTCCAGTGGGCGGAGGTCCATCGGGT CTGTGACGTAAAGGCTCATTAGTGTATCATTTAAAGGATGGGCTAAATTT TTTCTTCTTTAGGGAAGACTTATGAATTAGTACAATTCCATTTCCATTGG GGCTCGGATTCAAAACGTGGTTCTGAGCATACAATCGACGGAAAGCATTT TCAAGTCGAGGTAAAGAGTGAACAATTTGATATAATTTTTAATTTCATAT TGAAAGTTTAGCTTGGATCACAGGCTAAATATTAACCACCTCCTAAACTC CCAATTTTTGTCACGAATATCCGCCATAACTCAGAAGGGCAAATCAGTTA ATGACACTGGTGGACATATTGTTACATTCTTACAATTTTCTATCATCAAT CAAATACGGTCATATCAAAATTCGTGAAATGTATTTCAGAATCGTCTGTA AGAAATGAAGTAAGGTATACTAAAATAAGGGGTTTAGATTNTTCCCTTTC GAAAATTTGTGAAATGTATTTCAGAATCGTCTACATAAGAAATGATATTT TCGTCGTAGGTACATTTTGTCCATTATAACACAGATGATTTTAACAATTT CAATGAAGCCAAAACAGAAGAAGGTGGTTTGCTTGTTTATGCACAATTCT TAAAGGTAAATATGATGTAATTTTGTATGAAATATCCTTAAAATCAGATT GTAAAATGGTCTCGTTAATAAGTATAGATACATTGTCCATTTGAGAGATG ATGTAGTTTCAAAGACAATTCAAAGACTGACTTTTGGCGAAAGCTTAAAT TTAATTGGAAAAATTTCGAAATTCATGATGATTACTAATACTAACAGACA GTTTCACCATTCTCTTATCTTTTTTTTTAATATTCTAATAAATTTCAAAC CAAAAGTTTAGTACTACTACTTAATACTACAATCACATATATCTACAGTC CTTTGCATCATCCGCCAATGCTGGTTACCAGGAGATCGTTCCACAGTTCG AAAAAGTCAAGTACAAAGGTTAGATTACTTAATGCTAAAAGGATGATAAA AACTTACTCTAATACTACTTCTTAACCTGATTCAATAATTAGAACTGTAA AAAGGGAAATCTTTTCATCCCAAGAATTAATTATTTCGAACTTTCTGACT ATGAGATCAATGTTTGAAGAACTATCTAAGATTGTGAGCTTTTACGAGCC CGGATATTTTGTGGAAATAGTCTCTCTAACGTCAAAAAATATCGATATCA GAATATCAATTCAATTTTTTAGGAACAGACTTGATTTCATAATAAAATGT TGAATGCTTCATTTAGTTAATAAAGTCAACGGCAAGCCAAATAAATTTTC AATATTTCTTCATAAATTTCAGGTAACACGACTACCATCCCCCATTTCAA ATTCGACACATTGCTTTCAAAGGTGCCCGACAGAATATATTCTTACCCAG GCTCCCTGACGACGCCCACATGTGACGAAAGTGTTTCCTGGATTGTGAAC AGCCAAACAGTTGAAATTTCACAAGATCAGGTAACAGCCGCTGTGTATCG CACAAATAACGGACGAGGGTGTCATCGCGTACTAAAATAAAATATAGAGT GACACATTCAACTTTTTAATTCAATTTAACTTAAGTACAGTAGGGTACAG TGGAACCTTTAATTAGCGGACACCATTGGGGAAAGGGGTTAGTGTCCGCC GCTAATTAGAAGTGTCCGCCTTTTAGAAACTTTTGATATCGGTGCTCCAA TTTTGAAATTAGGCCATCCCAGGGTGTCGAAAATACAAAATTGGAGTATA AAGTACTTATCTGCAGACACTAGGCCATAGAAGAACAAGAGAAAGGTTAT TAAAACGCAACAATTTAGTTTTTAACAAACAAATAAAAAGAAAATCAGTG ATTTATGATTTCTTTGGCCCACCACCGTTGAATGGGTCGAGGGAAAACTG GAAATTTGTAGAAATAATTTGAATAATAAGACTAATAAGTGCTTGAAATA AAAATATCTAAAAATATTTTTTTCACTTTTGGACGTCTGTGAACCGTTTG ATATTCAATGTCCGCTAATTGGAGAGCTAAGATATGGGTTTTGGCCAAAA TTTGTCCACTAATCAGAGGGTCTGCTAATTGAGTGTCCACCTTTTAGAAA CTTCTTAATGAGGATTTGACTAGGAAACGGCCGGGGAAAATAAAATTGTC CGCTAATCAGAGGTGTCCGCCTTTTAGAGTGTCCGTTAATTAGTTCGGTT AACAATACCTTACTCCATAGTCCGAAGTTTTCTTAACTCGAACAAAGTTG TATCTCGACTGTACCATTTTAGTGATCAGGATACATTTTGCAGTTAGATT ATATCAAAATAAATTACATATACTTCTCTCTTTATTTTCAAATTTCATAC AAGTTTTTATAATTAGCCATATCTTCTTTTTGTTAAATTTAGATGTCGAA ATTTTTGGAATTGAAATCCAACAAAGGGGAAACAAACGAAGACCTTGTCA ACAATTACCGACCTGTTCAAAAACTACAACAACGCACGGTAGAAACCAAT GTGCCAGGAAGTGGCGTTACCATTACGTCATCATTCTCAATGATGCTCAT GACAGTTCTCCCAATAGCCTACGCTTTCTTTTAATTTAAACAGTCACGCC TATGAAAATGCATCAACAACCTCCATATCATTTGAACAAAAAATTTTTCA GTTTCAAAATTTGAAGCTAGATGAACATTTCATTTGGAATTATTATTATT ATGCATACCAATCATTTATTATTAAAACTAGGGATGTTTTAGACTATTTC GATTGCAGTAATAGAGAATCTTGAATTCTAAAGAATTCTAAAGAATCCGG TGGCGGAATTTCGGTCCTTTTTTAGACGGTTTCACAGAAGTTGGGGAAAG AATAAGTGGAATTACGGAATCGGGTACCCCCTGAAACCCCTCGAACACCA AGAACCGTTGTACTCGTTGTTATTTCTTAGTATTCAAAAAAAAGTTTAAT TTTAGACAAACTTAGTATATGTAAGATATTTGGTTTGATTTAGTAATAAG CAATCTTTGTGCTAGTATCTTACTCGTACCCATTTATTACACTTTGTATA TATTGCACTAGGACATTGCACTTTTACGATTCTTGTTTGATTTCCTGTTA CACGTTTTTTTTATTAGAACCTAGTTTATAAGAACATTGAGGCTGAAATT CGTCGAAAAATTAAGNTTAGAACCTAGTTTATAAGAACATTGAGGCTGAA ATTCGTCGAAAAATTAAGAACATCGTAAGAACATGCCCAGCCTCAGTTTG GAAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072987TCONS_00072987Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072987-proteinTCONS_00072987-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:233058..240263 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CA13carbonic anhydrase 13 Homo Sapiens
CA8PREDICTED: carbonic anhydrase-related protein isoform X1 Homo Sapiens
CA2carbonic anhydrase 2 isoform 1 Homo Sapiens
CA1carbonic anhydrase 1 isoform a Homo Sapiens
CA6PREDICTED: carbonic anhydrase 6 isoform X2 Homo Sapiens
CA7carbonic anhydrase 7 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.03 0.05 0.06 0.09 3.83 3.99 60.44 69.11 140.89 119.91 119.91 117.49 79.55 81.32 112.51 157.3 16.28 18.13 64.58 67.02 30.54 29.94 18.91 21.41 29.3 27.18 8.36 9.54 91.61 99.86