XLOC_045261 (gene) - C. hemisphaerica

Overview
NameXLOC_045261
Unique NameXLOC_045261
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:1309382..1316632+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045261 ID=XLOC_045261|Name=XLOC_045261|organism=Clytia hemisphaerica|type=gene|length=7251bp|location=Sequence derived from alignment at scaffold_86:1309382..1316632+ (Clytia hemisphaerica)
CTTTATGTTAAATGaattctgtttaaagattttcttattttatttattgt gATTTTTAGGTTGTACCTACAGTATACCTTCTTTTCgattgatttatatt tctttttcatctttttcatgtaataaaaattgagcaaagcaaaaaaaaaa agatataaccTACCAATGAAATATACACATGGTGAAACGATGGAGTTGAT TTGATCATACATTTATTGGACATTGGTtgcttgaagaaaaaaacatggag AAATTCTTGCGAATCTTCTCAAAGACACCATCACTCATTGGTATGATTCA CGTCCGGGCCTTACCAGGTAGGTTATATCTTTTTTGGCGCATACGGTATA AACGAACTTGCCTTCCTGCTAATTAGACGGGTCCCCCAAGAACCGGATTG CACAATTATCCAAGTTTTTCATTTGTTCATGATTTTTGTGAATCTTTTGA AGATTGCCTCCTTCTCAATTAGAAGGGGGTTGGGCCCTTCAAGAATCGGA TTCAGTTGTTCATGTTTGTCCTtgtaaattatttgaaaattatttcatgG TTACTTTCACTTTTCCTTTTAacagaatttgaaatttcaaatggtAAAAC CGATTTAATTTAGAGTCATCATTGAGGTCTTAATTTCTTCCCACTATTCA GGTACACCTCTTTACAAATCTGGATCGTTTGACAACATTGTTGACAAAGC AAAAGAGGAAGCTCAAGTACTTATTGAGGCTGGCATTGTAAGTAGAATCA TATTTTTATGTCATTGCTATTAACGGGATGCTCAAAGGTGCCCTCAAAAC CAGAAAAATCTAGACCTCAGTTGAATTTAGTGAAAATCCAGGGACCTCTT GAAACCAGACACAAATCCAAGGCGGGCCTCTTTAAATTTAAAGTCAGCAG GGTTTTCATCATGGGTTACAAATCTTTCCTCGAATAACCCAACGAATAAC CCACAAGGAAATTAGGTATTACATGTTTGTTTCTTTAGGATGGTTTAATG ATTGAGAATATGCACGATATCCCATACATGAATCGATCTGTTGGACCAGA AATCATATCATCCATGACAGTGATTAGTCATGAAGTAAAAAACATTGCCA AAACAATTCCTTGTGGTATACAAATATTGTCTGGTTGTAACCAAGCTGCT CTTGCTGTTGCTAAGGTgacattttttcttcatttgtcttgatgtttttt tctgaacAAGAAAgtatttggattttttcttcgaTGGAAGACCCTAGAGT TGCTCTGGCATTTTGTTATTCTTAGCAGTGTGATTTTTTTCGAATCAGTT AGCCTTCACAAATCTTTACCCCATTCAAGCCCAAATAATTCATAATGCCG GGAACTTATTCAACCATTACCAAACCATGGTATGCAGCATGAACTGGAAG TCCCGTACTCAGGATGCACGATTTTTTCTCCATAGTATCCTTAAGGGAAC AACTTTGGGATCCACAAAATTAAGGAAAAGGAAGGGGGAAGCTTTTGTTA AGATCAGTAACACTTCCAAAAGGAAggaatcaaattttttaaagctaAGG GGTTTCTTTCGTGTTTTCTTTTTGCGATTAGCTTggaatttgcttttttt tcaatttgctattttttcaaacttattaCGTTattcttcaggtaggtcca tttagcatgtagcttgtttgctttaaatttccaaaatGCTTTCTAAGGAA CACAAAATTTCTATGGCTCTAATCATTTTTTGAAGTTACCTGCGTTTTTC ACAGGCCGACACTTTTACAGCTCGAACGTTCTGTGTTTTGTTGGTATTTA CATAAGAGGAGTGCATAAGGCATGTCTGTTTGGACAGTTTTTTCCCGAGC AAAAAAATCTGCAAGCAGCAGTTTGCATTCAATTATGGACAGAATGCTTT ATTAAGCTAATCTTTAAAAGCCTATCATTAGTGGGTTATATAATTGCTTT CAATTAGTTTCTCTGTGTTCCTTGTTGATTTAACAGTCATGTGAGAAGGA ACTTGTAATTAAACGTCAGGAAATGTGCAATTATCTTGCCAGATTTTGTA ATTAGCTGTCATTTTAGATTGCCAGTGCCAATATACTGtattgtgaaatt ttttaaagcGAATTGCAAAGCTTATATTTCTAAAGGCCTTTACTTCAATG TTTTGTCCAAACAAACTCCCTTTGTATTTATATTCCTTTGAAGAATAAAA CCATCTTTCAAAATCTACGTTGGgctatttccagaaaaaaacgtACACAG GGGCTGGAGGGTATGTTGGTCAGGAGATCCAGTTGTATTTAAAAGATTGT CAAAAACTCATTTTCCACGGGGTAAATTCACAATGCCCTGGGTTATAATT AGTGTCCAGCAAAGATTTAttttatacactggataaacgactcataaaac gatggagagcgctcattgtattttcattgtttcagaaaacaatggatgtt ctagctttgtccgcaaaggacaactgtcatggctcgaagatgtctgattt ttgaaaatgtttatcagtcttatttttaaaaggttctctagctctttctt tttgtacatttacagaaaaaaaagtttgaaagtaaggctagcatttcGAG CTGGAtgcatttgtgaaatctaatgtgaaaaaaacatcattagacaagaa attcagacaaaatgcttataatgacacaaaattttcaattggaaatatct ttccaagactgtccccagaacaGCTGAAATTAATATACaaaagacttgag tgtcttgtctccactgtggtatgaaaatcctttggaggcacgtggtggca aggtggtttttttttaggttaaagtttgaaaatttccggtgtcaacattc aatttcttatacacaacacgtcttttgcatctttctcacagcttgaaacg tcataacgaccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagg gaaggagagtgaacaataatatcattactgcggacatagctagtacacga gaaatcggcaaaaatctgttacttgtatatccagtgtataataaatcctt tcTGTCCAGAAAGTAGATTTGATGCTTGCCCGTAAAAGTCGTGTCAAGAG GATGAAAAATCCAGATGTCTCGGTGTACTTGTACTTGAGCCCACTAAAAA CTTTTATTGTAATCACAATAAAAAAGTGTAAGACCAATCTCTCTTTAAAG TCTCGTAAAAAGCCTTGCTAAGAGTTATATTCGAAACTTTCTGAGCCTGC TCGTCTTTGCCCTTTTGATTAATGTTGATCATGATTTTAATAGATTACTC ATAAACAATCCATCAAAGctgttttctttataaattGATTGAGTATTCAA AACTAAGGATGTTTAAATCAATAGACCAGAAGTACATTATAATTGGTTTT TTATCTATGTTTTGCAAAAGTGCAACGTTCTTTTCCGCTCCTTTGCTATA CTAAGCTTGACGTTATGCAATAGCCAGTATTTGATTCGCAGTGATTTACC AAGCATAATAACGCCTTTAAGCCTTTAGATAGTCATAAACAGGCTTCATC GATTTAAATGTTTTAATTAAACTTTGTtgtcagattttcaaaaaagattc aaTAATTGATATTTAATTGATTACCGCCCTTACTGTGCATTATCCTATTG TTTTTCTAATCCCCTATTAAAATGAAAGGGATAGATGAAATGTCATGATA GATTCAATAGGGTAAACCTCTTTTAAATACTTCATGCTTCAAAAAGGTGC AGTGTTTGTTTTAGGCCACTTTTAAGCAAAACTCAGTTATGCTTCATTGT AAGAGACTTGCAAATTCTTTCTGCAAACACATTATCACACAGTATGAAAG GGGGTGTTGTGTTCCTTTTTCCTGCAGATGTCTAAATAAGCAAGCTGTGA ACAGTAGGTATACTTCATGTACTGTATTTCATCGTGAATATGGAACTACA TGTCATCGTCTAATAGaggaaaattgtccaaattcCTTCTCtgttcaata tattttttagtgATTGCTACATTATTTAACCTAAACTGAAGTTCATATAT ATAAACTCGCCCAAATCGATTGAAATGAGCTCATTTGGCTCGCCATTCAC AAAACTGATCTTTATCTACCTTGCCCTTGCCCTTGCCCTTGCCCTATCTA TGCATGATCAAAGACTACAACTGGTCCGTTCTGTTAGCCTATTTCAACAC TTTTGAGTTCACTCTATAGATTAGTTCGATACGCGATATTTCGTTGAAGT TCAACTGTTTTTAACTTTCTGGTACTTCAATGTTGTTTTTCAATGCTGTT ATTTTTACTATTTGTATACTCTGCCCTAATCTTCACTTATTCACGGAATC TGGTAAATGAACGGTCTGAATTTCAGAATGGCCAAGGAGTAGCCAAAATG TTTCGAATTTGTTTGATGTAGAAACTTCTTACAAGGAAAACTTACTAAAA GATTGAAATTATTCAAAGATTTGCTTTTCCTCATTTATACAGGCTGCTTC TTTGCAATACATCCGTGCTGAGGGATTTGTATTTGCGCATGTCGCTGATG AGGGAATTATCCAATCAGATGCCGGCTCGTTGTTACGGTACCGAAAATCT ATTGATGCTGATGACATCATGATTTGGACAGATATCAAGAAAAAACACAG GTTGGTTAAAGAACAAAGaacataccttatcggccctttttacattggcc cttattggcgttatttttgggctcttGGCGTAATAAAGGCCGGTGTAAAA ACGGCCGATAAGGTAGCCTTTTTCAGTTGCAATTCGATTCAGTTTCTTGC ACACTTTTTGTGTTTGACTTTAAGTTCAGGAATTGCATGACCACGTGATT AATTTCGCCTGATGAAATAGCCAATCATAGTGGATACTGTTCAACCTTAC AATGTGACCGACTCCTGTATCATTTAGTCATTTTGAAAGATTAAGGGAGA CGAAGTATATGTCAAGTATTGTGCTACATTGACATATAAAAAACGAGTGA TTAATATCATTTGATACAGTGTCCAAACTTTTCCTATCATATTCATACGA AAGATTTCTGATTACACCCAATTTTTCCATCACACTAATATATTGGATTA TATCCATCAAAAATCtgtgaaaattaataacaacacaaaaaaaaactagg tcaagttttttctgatataatgttttgattttgatgtctGCAACTATAGA AACGTCTTcttgaatttgatattttgttaaaattcaaaacataacTTTTA CAGCATTCTTACTTTCCTTCCCAGCTTCACTTTTTATACTTTTAATCATA AAAATGCTAAACTATACCAACAACGGTATCATAGTTTTGTTTCTGATCTT GACATTCTTATCAACGTACCTTGCAATATTTTGCTAAGTCAGCATAAGAG AATGATATAACCGAACTATATATATACTTCACTACATACATACAGTCATA ATGtcgttttaagccaatcaaaataattgaaattttttgaaagtaagCTG GTGTTTTCTGAGAGCAGAAAGCATTTCATTTTGTTCTTCCGTAGTCAACA ATTAATTCCTATAGTGTACTTTAATACTGTAGTCTCTTTTGACTTCTATC CTCTATACATGAGTTTGTTCCAATAATATTGGTCGTTCGTCAACACTGTA ATTGTTATGACGCATTAACACAAGATTATAAACTGATACCTCACCTTCCA ACTCAGTGATAGTTATCTCATgaattcttatattttttatagCTCACACC AGATAACATCAGACGTGTCGCTATCTGAAACGTGTCACGCTGCTGAATTC TTTCTATCGGACGGTCTTATCATCACTGGATCGTCTACCGGACAAGCTGC CTCGGTTACTGACCTTAAAGATGCCGTATCCACCGTGTCTATTCCGGCTA TAATTGGCTCCGGAATCAGCCCGGATAATGtggaaaatttctcaaaagca CACGCTATGATCGTTGGTTcttatttcaagaaaaatgggCTATGGAGTAA TGAAATTTGTATGGATAGGTTGAACTCGTTGGTTCGTGCTGTTACACAGC TGCAAAATGAACCTCAAAGGTGAAAACCAGAGAGATAGGAAATGAAAGCT ATCTAGGTAGCTatgaatttttaaacatttttttctataagatcaTAATA TTGATTGCATTTCGTAAATTTCATGAACAGCTCCGTGCGGTCGATTTTAA ATGAACCACGGCCAGCTATGGCGCGTTGAATTTCTTTGGAAAGCCGGAAT CACATGAAAGGTGTGTTCCTCCAATAAccattttttttagaaacaacAGA TTCTATGTATACAAAACGCTTATAATATAAAAACGAACGAAATAAATAAT CAATAACGGTGAATTTTCAATCGTCGATTATGTTCGTATCTAATAGGTGA CTGCCATGGAAACCTCGCTAGATAAAATAAAAGATGACTTATTTTAAACG ACAATATTGCATCAGCCATAAAAATCATGAttcaagaaaacgaaagtgga cAATCAATTCGGACAGTTTAAATCAATAATACGGATAGAGGGGAAAAtca ttgttttttattgatGTTCGTCGCACCTATTGAATCTGATTAAGGAGGGG TGCTATAAACAGCTCTACATCATAAATTATAGAATAAAACATGTTCATGT GATGCGATCTGTTTATTTGATGTCCTGACCCACCACgctatgaaaaatat attggtCGAGCTATCGAATCTGTTTTTTATATATGCAATATTTAGTATTT GATAGTTTACTTATGACGAATTTTGTATATTTCCCTCAAATAGTAAATCC TAAAGGCAATTTATGACTATAACTTAAAAAATAGGTCATGGTTTACGAAA AACAAAGCCAGATACCAACCAAATAGCAATTTGAACATTAATCTCGTACC CTGAGCAACTTGTACCACTTTTCGATTTCACTGATGAACGTGATACAATC G
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072959TCONS_00072959Clytia hemisphaericatranscript
TCONS_00072960TCONS_00072960Clytia hemisphaericatranscript
TCONS_00072961TCONS_00072961Clytia hemisphaericatranscript
TCONS_00072962TCONS_00072962Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072959-proteinTCONS_00072959-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1309382..1316632 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.73 3.53 2.5 2.26 11.18 8.04 9.91 11.67 8.97 9.13 6.23 6.28 7.31 6.39 4.79 5.7 8.06 5.8 7.76 5.47 3.59 4.61 3.57 3.58 2.84 4.09 5.12 3.84 4.62 3.96