XLOC_045252 (gene) - C. hemisphaerica

Overview
NameXLOC_045252
Unique NameXLOC_045252
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:1079722..1086507+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045252 ID=XLOC_045252|Name=XLOC_045252|organism=Clytia hemisphaerica|type=gene|length=6786bp|location=Sequence derived from alignment at scaffold_86:1079722..1086507+ (Clytia hemisphaerica)
CTCACATGTATATTTACCAGCCATCTTTGTAGAAATGAATAGGCTGGAAT GGTACCATTACGTCAATTACACCCTTTTCACACTTCTGATGTCGACGAAA TACATTCTGGTTGTAGCTGATGGAGACCACCCAACTGTTACCAGTAGCAA CAACGGCCTTAACACAAGTCAAATACTACTCAATACATCGATGGCTGTAA ATTCAACAAACGAGACCAATAGTTACTCGAGCAATAATACTTTTCATGAG TAAGTTTGAATAGGTTTTTATCGTTATGATTCTGAGTATATAATGTTACT GTTTTGCTCCGGGGCTTGGCAAGTAAATAAACATTGGCTTAAAAAGCAAC ACAATTAACATGAAggcaaaaataattttgattttaggtaAAATTCAacg ttttaaaggttttagatTTTACGTAATTTTGGCTGATACATCAAGACTTT AAAATCCAATGTGCTGCATGTAATTTCATCCCCTTGAAAATATTCAGAAA ATTTTaatcatgatttttttcttcaaccTTTCAATAGAGGCCAcaaaaag atgaagaagaaatttCCACCTGAGGGCTACGAAGGTCGTGAATCTGGAGT CCATGGTATGCGAAATATACTTTTACATAAAAGAAAATATCCTCGTTTCG GGCTAAAACGAAAGCCTCATTGAAGAGTTATTcgtaacttttgaaaaata ctttttagGATATACACAAGGTCACTAAAAAGGGAAGTATTTGGGAAGCG GTATAAGCGGGTGGAACAGGAGGTGGAGGAAACGGTGACGGTGGTGTTCG GTTGTTTAAAACTTGACCACCGCTATTTTTCCGTCTGCTACCCGCCCATT ACGGCTGTTTACTCCACACATAATAATTCCCCGCCTTTACTAGAAAGAGT GTTTCTCTTCTTTTTAGATGGACCTCAAAGGATAAATTTGACAGTGTGGG TGGAATCGATCGTCAATATTGATGTGTCTGCTAtggtaagaaaaagaaaa gaatttttcatttttcatttcatttttcactCGTATTTTTCCTCGAATCA ACTATAATGAAATTGATAATATTCTTGTTGCATAAATAGAACTGTCGAGA TTCCCGCATACACGCTTTCTGAAAaatgaggctcggctgttcttatttct tgTAATTTCCAGGCTTAAATACTCATCATCAATTACCACTTTTATAAAAC ATTAATTGATTCATCAATTGGATAAAGCTGTCACTGTGTCTCACTTACAT TTTGCCAATTGGCAGTGTGTAGGacagatttgcactgcaacggaCTGTGC TCGATTCCCAAACACTTCAAGACAGAGTGTTATGGAAGCATGGCCTTCAC CGTCTTAAGGccagtctccacttgcgcgcgctgtgactgcactttttcga gcaaagctaccatgctattggtcaaaagaaaaatgaagcaactccattgg cgcgatctgacgtaagggttgaaaaacgttgaaatgtgttcaactttttt ttcgagcgcgcgttTTTACGAcgttatcttttttccaagcaaaaaggatg gAAGCCAAAAATTGCGATTGCAGCGCGcccaagtggagaccggcctttag taAGATTATTAAGCCTGATAAgctattaaaattttttcaacaaagtGTAT CATATTTGAGAATTTGGCTTTGTCATTTTGAGATTTGCAAGGTGATCTTT CACTCATCTTGTTCCTATCAGGAATATGTGGTTCACGGTTATGTCATTCA AGAATGGGTGGATGCCCGTTTGAATGGATCGTTGGACCACCCTATCCTTC TTTCTGGAGAGGAGGGTCGTGCAATTTGGTTACCAGACCTCTTCTGTTTG AGTTGTAGAAGCTCGACACTGAATTCACCAACCAATGGGAATGTATTGAT CAAAGTTTACCCTAACGGTAGCATCTATTATAGTCAATTGTAAGTTTTTT CTACACCATTGTCAGTACAAACGAAAATGTACGTAGCCGAAAAGCTTTTa ctatgaaataaattttgattttttaataaaaaatggcgaatagattgaac ataagATTTTTCCATATCgtctttcaaaaaatatttgatcacTTTCTTTT ACAATGATTTTTTAACCAGAATTCATTCTCTGCGAATCATCAAGGTTACT TCAAATGACAAAGGTCTGTTTAAACGAGAAATATTTCAACCTAGGTAAAT AATCATCCAATTCTAGTGTATTTTACCCGTTTACTCAGCAAGAATAATAT TCGGCCCGCTATCACacttaatcgcacgatgggttattttttcttatttg gcacgccctcaaagagagcaattaatcgttaattgcatcctgtagagagc aattaatcgttaatcacactccaatgcggcgccaatgtttacaaaattga ttttaatgttttttctcacattttttttgcatcgaacgttttaattgcat tcaaatttattttgtgagaaagaaaatcaataaacaacaataaaagaaag acataaagagaagagaaaaatataaaactctcagtgtaatttctgtaatN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatataataactcgtaca attcgaaaattgcactcgtgatttttttgtttcgaattttcctcgtcctt tcggactcggaaaattaataacaaaaaatcactcttgcaattatattcga attgcacttgatatcatgtgattacatatgcTAATATTCTTTTCAGTACA CACTCCTGTGTCAAAAATAGCAAATGTACTAATTGAGTATCCTTGAATTT TACCTCATCCCCTCATTTGTTCCAGGGCCAAACTACATGGATCGTGTTTC ATGAAGCTTCACTACTTTCCGTTTGATAATCAAATCTGTCCTCTCAATTT GTCAAGCTGTAAGTCATTGTTTTCATTCCTATATCTACGTCTTTGAACTA GTAAatcgtaatgggtaatcagttCCAttgcgcgctaatgacgacttaat attgatccaaagttttgaaaggttttgaagatttttacGTTTAGCCAACG GGAAACTGTTATCGGGGCGTTCTGATTACCCATGGTCcatttcaactctg aaatggcCTATAGAAGAAGGAAATAAAACGAGCCATAGGTTTGAACTTTT CGACTATTTTATAACGCTTTACGCGGTAGGGCTAGTGATAGCTAGTGGTA TTTATAATATTAGTAGCATAGCGATCCGAAGCAACTGATCAATTTTTTAA ACCTCTTGAAATAATTAATGAATTAATGTCAATCTAACATAAAATCACAA CCTTAGTCATTTTTGTTCAATGGTGAAATTTCCATTAAAAAGTGACCTAA AAGGCATAGCGATTAAATGGCATTatgcttttccagaaaaaaaattgaat ataggaggataaaatattttttggtaatTCACCCTCCGGATATTGTGACT TTCGATCCCCCTGACAGCAGGTCTAACTCCCCGGACACGCATCAGTCGAC CCCGGGCATTTACGGgcattttctggaatggcccattcttGACAAATGGA AatgtattgaaattttcagtggTAAACAGGTTTTTCCTTTCTTCTCCACA CCATTAAAGATGGATATAGCAATGAATACTTGGTATATGAATGGAAGAGT ACGCCAGTTGTGGAGAAAATGCAGTTAGAACAATTCATCGTCAACGAAAA TGTTCTTCCACATAATGAAATCAAATCGTATCCTGCAggtaatttttaaa taattgtgAAACAGTTGAGATTTGAGctatagaaagattcaaattacatg ttttttcttttataagcataacgtttataagcatatgcaggctcaggttt gggtacctaaacaatggctttaatgtttgagaacaatagaatgctaagca taatgcgagcctgatgtaggagcagacacttgcttataaaaaaaaaacat gtatggaAATAATTTTAGGAGTAATTCTTCTAGACGAGGAGGTCTGAGAC TGAGAATTAGTTTGAATtctagaaagatttgaataatagagaGGTTTTCG GGATGACAGGTGTGTACCGCCAGAGTTTTCTTTGAACTTGGACTCTAAAG AGATAAATCTTTtaagattctaaaaaaatgCCTCGACAGAATAGAGAAAA AGATATCGAATTGAAAACCGTCCTGATGGTTCAATGTTAATTGCTTTCAG GCGATTTCAACATTTTATCCTTTGAGCTGTTCTTCACTCGCCAAATTGGA TTTTACGTTTTGCAAGTATTCATCCCATCCATTGTTTTGGTGTCGTTAAG TTGGATGACATTTTACATGGAACCAGCTGATGTTGGAGATCGTTTATCCA TTGGCGTCACACTCATCCTGACCATGATTTTCCTATTGGGTTATATCAAT CAATCCCTCCCAAAGGTAaacatgttgtttttttcggATATCATTTGCAT ACTTGGTGGCGGTTTTCAGAGCGATGGTGGTTTTATTCCAGAGTCATCTC AACTTCAATAAGGATGATCGGTCTTGGATTAGGAGTCACAACTTAGTCTA CAAATTTTTCCATATAGCGAATAAATAGAGAATCGTCATGGTTGACTTAT GTTGATCTATAGACCTTAATGATGTAAAGAAACACTATTTCGGTTGTTCG CAAGATAAATCACtccttcttttggcaaaattcaATTCCGTGAAACTGTA GGAACTTCAAGCCGATCTACAACACTGCTATTTATAAACCATTGGTATGG TAATGTGTTTTTCACCTACTATAACACTCCTTTGAATGGCCTACATATCT TTTACTCACTCCTATTAATCAACTATTTCTGTTTCATCCAGGTTTCGTAC ATCAAAGCGGTTGATTGGTATGTTATCGCTTCACTATTCATGATCGTTGC AAGTGTAATCGAAAGTGTCCTTGTTTACTGGCTCCTTCATCgtaaacaaa agaaacagaAAGAACAGGTGCATACgaatttcatatttcaaaaaatggag GATCTTCCCCCGAACTCATTCTTTTATATTAGAACTTAATTTGAGCTGAG CCTATAATGCTTTTGGAAATCCTGAAATTCATTCACTTGAATATGAAGAA AGCAATGTTAAAGAAAgaacttttaatgaaaaccaaaacctttccaaaag aaaatatttaacaactgaacccaaaactagcgaaaccaatcccaagaaaa atatacaaaaaaatcaATGGTAAAGATCATTGATCgaaatagttcaaaac aaatgCTCGAATACTACCACTATTCAATGGAATTAAAAAtaggttttgtg cttgttggaGAGCTAttcaggagtggaatattattaaATAGataacttta aaaataaaatggagaGTGAAGAAGACAGAATTGTTTACTATAAAGTTATA AATCTAATGTAAAATCCGTTTTTGTTTTCAGAATTCATTCGAGAGATTCG ATCGCTATTTGGACAAGAAGTTTAACATGAACAACTCTTTTTTACCATTA CCTTTACTACAAGGTGGTGCCCAGGCCGCTGGGATAAGCATGCCCAATCT CCCGTCGCTTGGCAACAATCAAAAACCGTTTTACCCTCGAATGACGTCCT TACAAGAACTCAATGAGAAACCCAAGCCGAATGGGATTAATCCGAAAAAA CCAATCTTCGCTAAATTGGAAGAAGATGAAGATATCGACGAATCCGATAA AAACGGGGAAACCAATTTCTGCAGCGAAAAGGATCCATTGACGAAACCGG TAATTAGAAATCGGGTTAACAGTAAGTTTAATTATCATCGGGATAGCCTT ATGGAACAGCGCGAAAAGAAAAAATCGGATGAAAGTGAGGAAAGTGAGTC TAAACAGTATAATCCGAATTTGGATAAAATTTCGAAATTGGATATTTTCG CTCGGACAGTATTCCCTTTATTTTACGTGATTTTTACGTTAGCTtacttt atttatttctttggcacaaaataatgagaaataatctAGAGAAAAACTTG ATGATGCCATTTGGGGGAGTATATTGAACTTTTTACTCAAGTTACTTTGA GAGAAGGTTGCTGCGAAGACTCGCTACAGAGATGAGACAATCATAGAATA TTTCAATCTATGAGTTGCCATCTGAACTTAGCGTACATGAAAATACTAAA GAATGAAAGCATTCTGGACATTTTTGACTGGAACATGCAATGGTATAGAA AGGACGTGGTCGCCGCGTTCGATATGGAGAATCTGTCGACTTTATGTGGA AATATCCTCATATGAAATTGAAGATAATTAGAGGTACACACATACAACAA TATGGTCTAATAAACTGTGACTTTGAAAATCGGATCATTTCCTAAAtgct ttattttttactttcaaaatatcGTAAAAgtatatacagttgacgctctc taattcgacgttctactattcgataggctcccttatacgatgaaatttaa aatctccgtcaacaagaaactctcataaacgacgctcccttattcgataa gctcccttattcgatgaaaatccaattccccttgaagatcgaattggaga gcgtcaactgtattacaGAGAAAATTATATCAAGATTATTGTTATAACAT TCGAAACGATATTTGGTGACAAATATAATCTCGGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072941TCONS_00072941Clytia hemisphaericatranscript
TCONS_00072942TCONS_00072942Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072941-proteinTCONS_00072941-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:1079722..1086507 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.62 0.49 0.23 0.24 0.26 0.1 0.08 0.11 0.11 0.14 0.06 0.15 2.48 2.76 0.15 0.12 0.78 0.73 3.81 6.01 2.27 1.94 1.21 1.49 2.96 2.58 0.59 0 0.36 0.16