XLOC_045229 (gene) - C. hemisphaerica

Overview
NameXLOC_045229
Unique NameXLOC_045229
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:520534..524999+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045229 ID=XLOC_045229|Name=XLOC_045229|organism=Clytia hemisphaerica|type=gene|length=4466bp|location=Sequence derived from alignment at scaffold_86:520534..524999+ (Clytia hemisphaerica)
aTTGGATAGACGTGTGAAAAATTTATCgacgaaaatattttaaagatgtG GTGGCGCGCTACATCATTAATGACAGAAGACCTGAAGAGATCTTCGAAAG TAAGACTTTCAAAGGGCTTTTATCgtggtgaaaatcaaattaaaagttat gaatCAGGCTGTGGAAACACACCGAAAGACGACGAGTTGTGTCAGATCCA TAGAACATTAATCAGCTACAAGGATGTTACCCTTCCTGACAAGATTTACG GTGGCCGAAACAAACAGTCATACATTGTTACCGATGACAACAAATCCCTT CAAAGAAAGGTTTGTTTATTGAGTCTATAATTACAATATTCGGCTATCAC GAAGTAAAGAATATTCTAGTTCTATTCTTCTAATCTAGTAGTTTTGGTTA AAACCATATCTTCTACCCCTACAACAACAGCCGCCTACCCAAGAGGAGCA ACCCAACATCAATTGATAAGAATTTTCACTTACTTTAGGGACAGTAAGTT AGGTACagctttttggcttttagaaaaaaGTCGATTGATATACTTGGAAA ACTGCCGTCTTATTCCGGACCATGTTTTTGTTTGCTGTGCAATATATGAC TTTCGAAAGGACTGTTTTTAGGCTTGAAGATAACTCTCACATTAGTCCAT GCAAACATTGATGCATTTTGTTACCCCTGACCTAAACACTAAAGGTGTGG CCTCAGCCTTAGTAAAATTAGAGCTCAGTCCTTTTATGGGCTTATTCATC CGCGAACTCCGActtaaacatttttcaaaaatgttatagATTATGAAGGA GTTGAATGTCGGCCCATTGGAATTCAGCATTGCGATGAAGACTTATCAAA ATGTCGTCACAGTTCAGAATGAGGAAAACATACAGGAAGATGTATACGTA GGAGGAATAGAAGGCATAAATACGTCTCCAACAGATAGTGAGAACAATAC TAAAGTACAGAGAAGTAAAGATACTTCTCCACCAAATGATTTAGCTCTTA TGGAAGAACTTTGTACAATCAAAGGTGATTATGGTAAAATGAAAGGTGAC TACGACAGCATTGTGGACAGGAACACGGCAGCTGAGACTGAGATCCGGCG ATTATCTTTGGTCAAAGAAGAATCCGATCTTGTACATCGTGAAGAGGCAG ATGCTTTGTGCAACACGATCGatgatttgaataaaaaattgacaacgGCT CGTAAAGAGGTTGAAGAGATGGGCATGGATATCAAGGAATGTATAGCCGA TACTACCTCTCAGTTGAAACAACACTTTGACGTGTTATTGGCcgaagaaa aagaacaaaaccAAGCCCTTCTAGCAAAAAAGGAGGCTGATATTTGTGAA AAAGACTCTCaaatctttgaaataaaaaaatattttgagaggGAGCTAGA TGCCGTGAAAGAACAAGGAGTGAAACGTTTAGAAAGAATGCtttctattg aaaaagaaaaatcggAGATGGATCAAAAAACTATTCAAGAGCTTCGTAAA AGCTTGGATGCCGATCAAAAAATACTCCTTGATAAACAACACTCCTTACA GCAGCAAACGGAATTAGTAAATGGCCAGGCCTCTCAGCTCGTAGAATTGA ATGACAAGAAAGCTGTCATCAAGAAGAAATTGTTTAAGGCTACCAAAGAG GTCAAGGAAGCTAAAGATAAGGTAGCCCAGGGTCAAGAAGCGTTTAACAA ACAACAACAGGAGCTGGAAGATCTAAACGCAATTAATGAGATATTGACAA AGAGTAACGAGGAAGAGCGTAAGAAACATATTGAAGAACTGACACAAAAA GAAAGCGAGTTGGTTAAGATGTGCGACAGTTCCAAACAGCAACTCAACAT CAGCGAACAAAAAATGGGATTGCTCAAGACAGAGAATGATGCATTGAAAT TAGCGCAAGTCGAATCTGAATTAACACATGCGGCAGAGATGGCGAAACAG AATGAAGTATTGGTCCGTGCGAAAAACGCTCACAAGGACGAGATTGGTGA AGCCAAGGAGCAGATTGACCAGTTGAAGAGAGAAGCGGGCCAGATGGATT TCATGCACCAGGAGACATTGGCTGTAAAATATGGCAACCTGGAAGAATCT GAATTGACAATTTGtttcttacaaaaagaaaaagcaataTGTGAAAAGAA ACTAGAGACTGCATCGAAAAGTGTTCTTTGTTTGGAGAAGAGATTAAACC AACGTGAAGTCGAGATTCGTGCTCGTTTGGAAGATATTTCTgcacaaaag aagaaagaaaatgcGGACAAAGCTACTATCGAAAAACAAAAGGTCTCTAT GGAGAAAATCCAGAACGATTTGAAACGTGAAAAGAAGAGGATCGAATCTT TGATCCGTGAACGTAATGCATACAGAGATGAAGTAAGATCTCAGCATTTT ATTCTAATAAATTGACATCGATCAGAATCCAATTAAAATAAATCTTTAGG AACTGAATAGCTAGGTTTTCCTTAAGAATAAATATTTATTGAGTAaatca ttttttgtttaaatgatTGTTGGTTAATCAGTATAAACGCTACaatagag tctctttaactcgaacctctataactcgattaTCTCCTTAATTTTTATTG TCCCTCCAGTCAACAATGCtttaaaccttactccataactcataATGTTC TTAACTCAAACACATTTGAGTAATGGAGGGTCAACTGGACTTACTGTGCT TCGTACACATCCAAATAAACTTTTACAATACAAAAtacgagaaaaaaata taacaatataggcgaaaataaaaaaatgtagtgtttccggagtgcggaaa ggaaaaaagctctcatgcggccggccggaaaatttttttttgctattttt NTAGTGTTTCCGGAGTGCGgtaaggaaaaaagctctcatgcggccggccg gaaaaatcttttttgctatttttgataacttaagatcattgaaatataac tttaaagataacctttatgtaaaaatagtatggagtaagccctgaatact aatatCTCAACTACCAACAAAAGTCTGCAGCtgggtcagaaaattttttt ttttcacccggccagTTTCCGGAAACATActacatatttttattttcgcc taaggTATAGATCGATATTGATCGCAGGTATTGGGAATGTTCCTCATCTA ATAAAAACTTGTCTTTAGGCAACCAGTAATTTCTTTCGAACATTTCTAGA GGGGAGACCGTCTTGATTATGTCTGGgttatcaaaattatatttaaatat ttctttttaggctCACACGAATAGCATACAAAAGATTGAAGCTAACAAAA AGCTTGAGGCTACTAAAGAACACTTGCAAACGGTTNAGATTGAAGCTAAC AAAAAGCTTGAGGCTACTAAAGAACACTTGCAAAAGGTAAAGAAAGAATA TGAGTGTAAAATTGCTCAAATGCAACCTATCCAAGAGACAAAGGCAGTGG GCAAGCAAAAGCAAAAGAAACgaaagagaaaatcaaaacaggtTGCTTCC AACGACATCGAAGCAAACACACTTACTATTGCTACACAAACTAATAAAGA ACTTACAAACCCACAAGAAGCAAAGCGTAACGATTTAAACGAAGATCGAC CAAAGAAGTCAGATCTAGATAATGGGAAGATTCAGAAAGTCGCTAAAGTA CAAAAAAGGTATCTAAGCTAATGATGAATAAATCGAACGATAGAATCTTG GACTACTATATAGTTCACCTGTTTCCTTTCTGCTTCTAGACATTTTCGAT CACTGAATGCCcccccccttctcacagacccggtaggatttttccagCCA GTAgaggtaaaaataacggaccaaaactcaatggagattgatattcccat gtttttaatTGCTGGGGAATTGAATTCCgttgttttcgagccagaaaatt cagtggggatggaaaaaatagcacaatattttacagtgagaatttgctta tctgattatttttagcggggacaaaaatttgagtagaattttccaccggg gacgatattttggctagtttttccagtgggaagggttcccagtgggtctg tgagaagggattGTTGAATAGATCTTGCCTCGCAACCCTTTTACAATGTC CAGATTGGTAAAGCTTGCTTTCCATTAAACATCATCACTActgatttttt agttttgttcaACGAAAAAGTCCATCAACAATATCTAAAAACATTGTAAG CAAATCAGACGTTATTTTCGACCAACATGACAACGAAAGACCCTGGGGTG TATATGACACTTCACTTGTCACCTTTTGTATCGGAATATGGTTTCTTCTC ATCAAGGTCTGCAGCATTGTCACCAACGATGATTCACTCTGGTAGTGACG TCATCACCAAATTATACGTATACatttgtaaataattttctcaTCCTGGA TTCTTTATACTACTTTTTAccacttttttatatatataaattattttcta aaaactaacccaaaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072883TCONS_00072883Clytia hemisphaericatranscript
TCONS_00072884TCONS_00072884Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072883-proteinTCONS_00072883-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:520534..524999 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.26 0.05 0.39 0.36 0.21 0.16 0.02 0.43 0 0.05 0.08 0.01 0.02 0.04 0.03 0.07 0.04 0.12 0.11 0.03 0.01 0.02 0.06 0.05 0.22 0.25 0 0.02 0 0