XLOC_045224 (gene) - C. hemisphaerica

Overview
NameXLOC_045224
Unique NameXLOC_045224
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_86:412898..417519+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045224 ID=XLOC_045224|Name=XLOC_045224|organism=Clytia hemisphaerica|type=gene|length=4622bp|location=Sequence derived from alignment at scaffold_86:412898..417519+ (Clytia hemisphaerica)
ATCTGTCTCGTAAGTGTGACTTTAACGCAAAAATTTGATGGGTTTTTAAT GCTATTTATGAGTTTGAGATTAACAACCTAGTCACAGGATAAAGATGAAC GCTNATTAATGAGTTTGAGATTAACGACCTAGTCACATGATAAAAGATGA ACGCAGCAAGGAGAAAATCGTAAGTAATTTCACACATCTATAGTAAAATA CCGGAATAAAATCTTTGACTTGAGGAGAACGCGTAAAGCTCGAAATCCTT AGAAGGTTGTAAAATAATGTTTTCGAAGCAATCAAGTTCGGAGGGTTACA AACAATTTTATATTACATTGATGTGAGATttagtagcgtggtgggtcgac cGAAAGCTTTGGGCAAACTTGGGATGCGACTTTCGAAAGTTGGGACGTTG GTGCCTCCCTTATCGAATGTGAAATGAGGAGGGAGTTTATACAGCTTTTC GAttgtagccgccaattgccgcgcaaGCATTTTTTGCCCGTTTGACCACC CTAAAACAGTCCCAGTCTTCGCGCCTAAAggcaatagaaaaaagtgttaa aaagggattggatcgagtttcgggtagtaaattaaataataaagttgcac gcgcctgaccgcgcaaCTACGGTCGAAAATATGTATTATATTAACGTGAG ATTTAGTATTGTGGTGGGCCGACCAAAAGCTTTGGGCAAACTTGCTGGGA TGCAATTTTCGAAGGTTTGGATTTCGGCGCCCCCTATCAAATGTAAAACG ATTAGGAGGAAATTGGAGTTTATTGGTAGCCGATgaaaattttatacttt ttaggtttagaaaaagaaaaataaacaagtaaCTGTATTTTACATAACAT TTAACATTTTGATGTTTGACATTTACATTTGACGGAAAGGAGGGAACCAG CTCGAGCTTGAAAATGTGAATTGAATGACCCCACTCGATGTTCCTTCTGT CGAAAATATACGAAAATTGTTTGTTTCGGTGGtgttaaatttcattttct ggatttttttgataagcatttgattgacgtttacttATTCACGCCAGTAT CTTCGTTGCCTAGAAAGCCGGTGACGAGAAGCCGATGACGAAAACTCGTA TGGCGAATCCtatctttctgttttttttttaatatggtGATATGGCTACG GTAACAGATTATGGGGCTCATTTTCAACTAAAGTTTACTTGGATAAGAAT AGGCTAGACAAATTCAGTTAGGGCAAAGGTGCTTACCCGTTTTTGGTTca aaattacgtcattttcgcATTTTCGAGAGAGATCTCTACATTCACAAAAT TTCTTCTAACTaatttgaaaactttaattCCCACAATGGCAGCTTTTCTT CATGAAGTTTTGTAACCGACTTTTAAACTTATTTATAAGTTTTTTTAGCG AGGAAACTGAGGTATACAACAAGagacaccttttcgaccgtagtcgcgcg gtcaggtgcgtgccactttattgCTAATTTATCACTCTAAGCTCTAATCT AAtcccttttttacactttttctattgtctttaggcgcGAAAAAATGACG Gggatggttttagggtggttaaacagacaaaaaatgtccgcgcggtaatt ggcgggtacggtcgaaaaggtgtattatagcAAAATGAGAACATATATAC AAATTACAAGTAGGAACAGATGTTTGTGAAAAACGTCAATGTCAGAGGAA GACCTTTTGAACTAAAGGTAAAGATCCGGTTTCTCTTTAATCACACCACG CAACTTCGTGATATACGATAAGTGTTAGTGTTTTGTACAATGACGCAGAT TAGGACCTGAGTGAGGAAACCCTGCACAAGTGGCAAGGGGGTGAATTGTG GAGGCGTAGAAAATATCAGAATTGATTTTTAactcaaaaatatcaattta aattattaaaataattaaattcCCTCAGAACTATAAAGGACTAATTTTGA AAGCATATTATTAGCTGATCTTTTCGGCTGCTCCCAATAAGTGCTCCTGC GCTGCCTCAAAGGTTTAAAGTGGTCAAACTATTCAATCCGATGGGAGAAA AGGATAAATAataacatccctgtctcagtgccccggtggaaatttttccc tcagtgggaatgaaaatctctgtcgaaatcccaatggggatagaaaatct attgtttccagttTGAAAATtctagtggggatggttttgaagtgcaattt tttccattcaactTCCAATGGGAAAAAATCATAGGGCAATATCCCAGTgc ggtttgaaattttttccaccggggacgattttttgccaatttttccgggg ggggggggtttttttttcatttttccaggggggggggggggtccaccggg tctgtgacacagggatgtatAAGATATAGGTCTTCGAGCAAACTTTCTAT ACTTTCCATGCCGAACGATGAAGAGACGTCATTAAGTTGACAGGCAAACT TCGGTgggatacacgctttttttacaagaataacttctataagaatatca gagTGAGGTTTCGgagttagaacaataggcctattgtttagaacaataga aaaataagaataatacCAATGCTTAGCCTCAGCCACATTagagtattctt ataaaaaaagcgtgtactacTCTTTTGATATGAATTGTAAGGGACAAAAT AAGTCATATAAAAAGANtaaactattcttataaaaaagcgtgtattactc tttcttttgatatgaGTTGTAAGGAACATATAAAAAGGACAAGAAATTGC TAAGCATGCGGAACTTGATACCACAATGTAAACATAGCCTTATAGGATAa cctttttttcaaatccatctattcttgtttttgtattttttgacagTGTA AAAATGACACTTCCAGAAGACTCAACGGTGGAGTTCGATCAAACTGACGA AGCCTTTGAGGAGGAGGGTACGATCAATCAAACCGGTCTATCGGCACGGG ATAAATTAATTAAGGAAGGAACTGAACTAGGTTACAATACCACAAAACAC GAACAAATACAACAAAGTACAAAACAGCAGGATCAAATAAGCAagtcaaa acaagaaaatatctTGCACAGCGAGGACGATAAAACAGTATGGCGTACTA TAAAAAACACTTGTTTGAAAGATAAGCCATTGAGAAATCGTAGACTTGGT CTTATTCACCAACAATATTCTGCTTCACATGAAGATTTGAGAAACGTATC AAACAATAATCGGAGATTATCGAAAGATAATTTGAATTTATCAGCAAAAG ATCTTCATTTACGAGCTTCTAACGGAGATTTACGACGAGTTCAGGATACG ACTGTAAACCAGCACCATCAAAGAGCTTCGACAGAAAATTTACATTTACT ACATAGAAATCAACACTTGCGACGGGTTTCCGTTCCACATTTGGATCAAA CGAGGAGCTTACCTGTGAGCCCGGTCATGTCTCCACGCTTAATGCGTCGC GCGAAAGAAAACACAGGGTTCATACCTTGTCCACCTGATTCTCCGAAATC GAATCGCAAACACATAAGGAGGTCAAGCAACACAAACTTGAATCACATCA AAAATATGAGAAATCCAGAATCCCCTTTGACAATACAATGTGCAGAAGAT GAGGAAATTAGAATTTTAAACTTATCTGGTGGAAAATCTGTCAACCCAAC GGatgattttttgttaaaattcgcTATCCATCGATCACAAAGGTAACGTC CATAAGCTCGCCTACTTCACAATAAACTCTCCCTATTTCGACCTCTGTTA TTTCGTTCTCCCCATAGCCCAAGTTAATTTGACTAATTTGTGAGCGTTCG AGTTGAAAAAAGGGtgataaaaatgacaatttaaatAAGACAAAGTCAGG GATGGAGGTGTTGCTCATATAAGGAGGAAATCATGCTTCAGCCTTTGTAT CAATTTAATGctaatttattcaatttttcaagcgaaaaaaaattacagta aaACGTTCTTTTTTATCAATGTTTCATATAAACTCTTTTTCAGTGTGAAA TCATTGCCGAACGCCATGTCACCACCACCGACAAATATGACCCGGCAACT ACCGACGAATTACTCGACAGGACGACGGAAATCGTTGCATAATCTGCAAC GTTGTCAATCGACTATGAGTTTACCGAATTCTCCCCCGCAAACACCGATC GGTAACGCCGATCATCCATCGGGAGATTATCTTGCTAGTCGGCGTAGAAC GGTAGCGCTCGATAGAGGAATTCAACTTCGAAAGACATTCGAGGAATGGT TGAACACAAAAACGCAAGAAAATCGGAGACGTTCGTTACACACGCTACAC GTGAAAGAAATCGAACGATTACGTGAAGAACAATCGAAAAAAGAACGATT CGATCGAGGAAAAACATTCGATGAAtggaaatatgaaaaagaagaacGAT TACGTCAGCAAATATGTCACGAGAAAGAGAAAACGAAAATTCTAAGTGAA CAACAAGTGGTTAAAGAAAAGACAAATGAAGAGTTAAGAGAAAAGAAGTA TAATGAATGgcttgttaaaaaattcgaGCAAGAATTGAGAGATGAGGAac agaaaattgaagaattaaGAAACAGAGAGAAACTGAAACAGAAAAAACga cgaaattcaaaataattttttt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072874TCONS_00072874Clytia hemisphaericatranscript
TCONS_00072875TCONS_00072875Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072874-proteinTCONS_00072874-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_86supercontigscaffold_86:412898..417519 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.02 0.06 0.09 0.8 0.32 9.19 9.82 5.38 3.7 1.8 3.13 2.42 2.72 0.38 0.77 3.95 4.01 4.14 2.79 4.74 5.56 5.02 5 5.42 4.15 0.47 0.54 6.28 5.17