XLOC_045187 (gene) - C. hemisphaerica

Overview
NameXLOC_045187
Unique NameXLOC_045187
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_84:253035..263110-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045187 ID=XLOC_045187|Name=XLOC_045187|organism=Clytia hemisphaerica|type=gene|length=10076bp|location=Sequence derived from alignment at scaffold_84:253035..263110- (Clytia hemisphaerica)
TTTGATGATAGACACAGGAGTCTAGGTATGAGTGACAGTTTTTTAATATG
ATCTTTTTCTGTGTGTTATGGTTTTGGAGTCCACTGAATCATATATTTGA
TAACTTTCTTCTGTTATATGAGATTTTTAAGATGAGGATTTTTATGTGTT
ATTTTCATGGACTATCGTGTGTCTTAAAGTTTATTTTTTAAACAGGTTGA
TTCATTTTGGATTATTTTTTACCAGATTTGATAGATTTGATATCGGAGAT
TCGGTTAGATTTTAATAATGAGCAGTTTTTCTTGTGGTGCAAAGTGATTT
TACTCAGCAGGGATATTTTAAGAGTATTGGATGGCCATATTTGATTTTTC
AAGGTCAAGAGATTTCAACACGAGCAATGTTTTTCTTTTTTTAGTTACGA
AATTATTCTACCAAACGTCTTATCAGATTATAAAACAACAGCGTCTTAAT
TATTTTGTTAAAGATTATCTTTTACCATGTAACTTTTAACACAGGCATTT
GGCATATGGAAATATAGGGTTCTTGAATGACCGTATCATATGCTATTCAG
TTTGGAACACAATTTTTTATAAGAATAATTATTTAAGAATAATGAGGCTC
AAAAGTGTTAAAAATAGCGTAATGATTTAAGAACGATCCTGACTCTAGAA
TGACTGAATCACAGACAAGTTAAGGGTCATATTATAGGCCTTGTGAAACA
ACTGTAAAATTGGGGAGGCTGAAGGCTCAAAATTAAATAAAATTCGCAAG
GAATTTTTGAAAAAAACCTCATTTGCTCAAAAGGGAGAGGCTGACGTCTC
CCCAGTCTCCCCGCTTCCGCTGGGCCTGAATCAGTTATAAAATAGGGGGT
ACAAAGCGTTAAATAATCAAATTCAAACCTAACAAAAAATTGGAAAAAAC
AATTTGAGCCGCATAGTACCAAAAATAAGAAAATCAAAGCCTAAACAAAA
TATCTTGGTCAAAACAAAGGGTCTACCAAGAGAAGAAATAAAAATTTTTA
AGTTCATCAGCATTCAGAAAATGGACTGCTGGTGTAGCTCCAACCATACT
CAAGTCCCAACTTTCTTCTTTCAGATTTTCTAACCAATAAGAATCACCAG
TATGGCACCACCAGATATTAAGAAGTTATTGAGGATCAAAATCAAGCCAC
GTAAAGATCCATACACGGATCAATTCAGTCGTATCTTCATGGTCAAGATG
ATGATGTTAACTGCCACCATCACTGGGTTGAGCTGGGCCAAAGATAAGGT
AATAATAAACACTTCCTTCTTACAGACCCACTGGGGTCCACCTGGAAAAA
TTGGTCAAAATATCGTCCCCAGTGGAAAATTATACTCTAATTTTTGTCCC
AACTAAAAATAATCAGAAATTATCGAAATCCTCACTGCAAACTATTTTTC
CATCCCCACTGAATTTTCTGGCTCAAAAACAATGAAATTCAAATCCCCAG
TGATAACGAACATGGAAATATCAATCCCCATCGAGTTTTGGTCTGTTATT
TTACCCCCACTAGCTGAAAAAATCCTACCGGGTCTGTGAGAAGGGGTGTT
AATAAATAGATTAATAAAGGCCAATAAAGGTATACCAGCAAATTTTATTA
GTACTTGCTCCAAGTCAAACTTGAGATAACAAGGACTTTAATGTATGAAA
TTCCTGTTGATTGGGTTAAATTGTTTGAAAGTTGGAAGTTTCAGTCAAAA
TTTTCTCGGTTTCATTTTTTGTGCTCGGTCTTTTACAGTTTTTACAATTT
TTTAGAGCAAGAAAAAACTATTGCTTTTAGGTCTCAATTGTTTTTAAATA
GGTTCATTTGTGATTAAAAAAAAGTGATTACTGTTCAATTAAAAGAAAAC
GTTTTATCTGTGTCAGCACGATTTGTGAAATTCGTACACTCTAACACGAT
AATGGCATAACTACGATGAAACACGAATTTTGCACATAAAAATGTATAGT
AAAATGCCTCAGTCATCATAAAGACTTATTTTTTCTCGACAAGAAATACT
TTTAAGGCATTTGAAGGTCGTACAGTCGCTTGCTTCTCTTGAGAAGGACT
TCTGGTTGTGCTTGTGTATAAAAAATGAGTCTTGACATTAGAAAATAGCG
CTACGGAAAACACAAAACTGTCAACTGTTGATACACGTTTCCGTTCTCCT
TGACCACAAAACTTGCTATGTTATGTTTTTGTTTTGGTTACCTCGAAAAA
GGTGTCTTATGACTCTGTATTAAACTATAAGTGTTTGAATTTCTTCCATT
TAATTCATCGTCTTTATACCTTATCGGCCCTGTTTACGCCAGCCCTAATT
TAACACCGGCCTCTTTTACGCCGGCCCTTATTCCGCCACAGCCTAATTTT
GGGCTTATGCCAATTAGGGCCGTAAATAACGCCAAAAGTTTTGGCCCTTT
TTACGCCAGCCCTTTTAACACCGGCCCTTATTACGTCACGAGCCTAAAAA
TAACGCCAATAAGGGCCGGCGTAAAAAGGGCCTAGAGGGGCTCTTCCCTC
TTTCCTACAATTGTAGGGTGTTTTTCTCATTGGGGACGAAATTTTGGCCA
AATCGTCCTTAAAACAATTGATATATGTGTTCCTATTAAAATGCTTACTT
TGTCACTTTGTTTGTTATTGCCGACCTAAAAAAATATCAGCGTTTTGATT
GGTCGAGAGCATCGAGATATTTGCGATATTTCATATTTCTTTAGTCTGGA
AATATGAACGCGTTGACTTTTGGGGGACTGGGTAAGCGGCGGGAGGAAAA
TCAAAACAAAACAGCCGAAAAGAACTGACTTTTGGAGAAACTGACTTGGG
AATCAAAGGGAAAAATGCATCAAAAATATGTTCAGATTAACTTTTACTTT
GGAGTTCTTCCATAAAAGACACTAAAATCAAATCTGATGAACTAAGAAAT
TATAAAACTACTTGACACCACCCAAANNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NATATTTTTCCTCGCCTAAAGGCTCGGAAAAATATTACGGAAAAATCTCG
GAACTCGTAAAATATTTCTCGTATTGCACTCGAAATCATGCGATAACTAG
TACTTATTAAGCAGATATTCAATGGGTAAAAGTTGGTTATTGAGATTTAT
TAACCCGAGGTGATGTAATATTCAACGAGGCGGAGCCGAGTTGAATATTC
ATCACCGAGGGTTAATAAATCCAATAACCAACGAAAACCTATTGAATATA
TGTTTTATTATANTGTTCTCAAACAATAGAGCCATTGTTTAGGTGCCAAA
AACTGAGCCTGCGTATGCTTATAAACGTTATGCTTATAAAAGAAAAAACA
TGTAACTTGAGATTCTTGAATGTTGGCCAAAAAGATTTCTCATAACATAA
CAAGGGAAGTGTAATGTCTTGTATTAAACCAAATGACGAGTGATTTTTAT
GAAAGTTCTCTCCTAATTCTCGTTCTCGACAACAACGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGGTGCGT
GGGTCAAAATATTTTTTGCGTGGGTCAAATTTTTTGCGTGGGTCATTTTT
TTTGCGTGGGTCATTATTTTTTTGCGTGGGTCAATTTTTTTTGTGTGGGT
CAAACTTTTTGCGTGGGTCAAAATTTTTGCGTGGGTCATTATTTTTTGCG
TGGGTCATTTTTTTTGCGTGGGTCATTATTTTTTTGCGTGGGTCAATTTT
TTTGAGTGGGTTTCTATTTTTTTGGTGATTTTTTAGCTAACTCGATTTTT
TTACAAAATTGAAACTTTCGAGTTAGCTAAGACGTTTTTTTTGTCAAATT
AAAATTTTCAAGTTATCTTTTACAAAAATGTGTTGTGTATATATCTACGA
AAACTAAACAAAAGCACACAGTTTTTATGTAGTAACACCTTGTGGTTTAT
TTTACATAGCTGCACTTATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCTTAAATCAAAGAAATTACAAGTGG
GGTGGACGAAATAATTGACAACGATTAAATTGTTTAGTAATCGGTCGCCT
AATGAATATAACTTTTGTAGAAAAATGTTCAGATTTTGTCGCCATTTGCT
TTGTTCTTTAACACTCAAAGGAAACCCAAAAGACTAAAGCGTGCTATAAG
AAGCTTTAAAGCTTCTAAAAAGATTCTATAAAAAAAAGCTTCCTCTTATA
AAAAGACAGCTACAGCTATGCAAAATAAACAAAATAAACCAAAACGTGTT
ATGTAAAACACATCCAACATTTTGGATGTGACCAGTGCGAATTTCAAGGG
AATGCATTTTTTCGAATTACATAGAGAATTTTGACCCACGCAAAAATTTT
GACCCACGCAAAAAATATGACCCACGCACAAAATATGACCCACGCAAAAA
ATAATGACCCACGCGAAAATTTTGACCCACGCAAAAAATTTAACCCACGC
AAAAAATATGACCCACGCAAAAAAATTGACCCACGCAAAATTTTTGACCC
ACGCAAAAAATATTTTGACCCATGCACCCCCGCAAAAAATTTACCCACGC
AAAAATATCTACCCACGCACCCACGCAACCACGCAACCCACGCAATTTAG
CAGACTCATATGAGATAAAGTGTANTATTTTGACCCACGCACCCACGCAA
AAAAATTACCCACGCAAAAATATCGACCCACGCACCCACGCACCCACGCA
ACCCACGCAATTTAGCAGACTCATTATATACCTAGAGGCAAAAACAAAAC
ATTAATAATTGTGTCAATAGTCGAACGTTTCACATAAAACACTCCCATAA
TCGAACGTTCGAATGTTTTTCTTTTTTAAAGATTTTCTTAATTACTTTGA
GACATAAAATTGTTCATGAAATTCACAATAGATTTTTTTAATGAATATCT
TTGATTTAACAACAAGAACGACAAAAAGAATCAAACTTTGAATGAAAAAT
GTGAAAAAAAAATTCTACCGTGGTATAATAGCCATGGTATATCAGGAATT
ATTCGATGGCTGTTTTTGCCTACAGGTATATAATAAATCAATTTATTTAT
TTATTTTATCAAGTTCAGTTAAAATTTATAGGAAACTACCCCTTGATATT
TTAACAAAATCGTCTTTACTATCTGAAAGGTCGTGAGTCATAAAAATACC
CATTTTTATCTGTGTTATCTGTTATACCACTTTTCTTTTAGTTTACTTGT
ATCGTTCCAAAGAACCACGAGACAACGGCAGCTTTCGTTCAAAAAGCTTG
TTGGATTAACGGTGTTTACATCTACAAGAATTTGAACCCTGTCTTCAACA
GCTTTTACTACGGCATCCCTAAAGATATTTCGCATAATGGTAAGAACAGC
TAAGGAACTTGTAATGTATAAAACTCATGAGTTGATAGATTTTTGAGCAT
ATGTCTACTACATATTAAATCGCAGAACCAAGCACTCTTGAGTTGATAAA
GCTCAGGCCCGGTGGAAGCGGGAGACTTCACTTTTGAGCAAATGAGATTT
TTCTCTCGAATTCCTAGCGAATTTTATTTTGAGCCTTCAGCCTCCCCACT
TTAACGGTTGTTCCGCCGGGCGTGAAGTTCAGTGCATTATTTTATTATGG
AAGGCTGTCATAAGGCTTAATTAGCTCTCTCTCTCTTTTATGTAAAGCAT
TCGAAATTTTGAATAATTTCTCGAAATTTTCGTACTTTTTTATCCATACA
TTTCATGGCAAAGATGTTTGTAACGCGTGCTCTGCTGTTGTAACGAATTT
TAAAGCCCACTTAAAAGTTTTATTTTTACATAATTGTTCCCGTTTTATAT
CAGACACATAGACTCAGACTCAGTTTTTTCTTTCCTCTTTCTGTCCAATC
TTGCTCCACATCCGTGTCAATCCAACGTGAAAAAGCTTGTGAATTAAACT
TGATGAGTAAGCAAACGATATCACTCCTTTAAGATCATTTAAATTTTCTT
TCCTTTTAGGTGAAAACAATTATGGAGCCCTTTGTAACAGTGACAAAGAC
CAAAATTGTGATCCACTCGAGAAAACTTTTTATCTCCAATATCAATGGTT
CCCACTTGGTGTTGCAGCCTTAGCTTTTCTATATTATCTCCCTTATTTAC
TGTACTGTGTTGTCAACGCTGATTTGATTCTCCTGAAGAACAGCATCAAA
AAGAAGAAACGAGAAGAGGTGGATTACCAAGAATTGATTGATAAACTTTT
CACACCTTCCAATTCGCCACATGGAGCTGCAAGAACTTTGTTAAACCTCT
TGGTCAAGATTTTATACATCATTGTCAACGTTTTAGGGATAGTAACTATT
GATTCAGCAATCAATGGTGAATATGTATCATTTGGAACTTCGTGGACAAA
GTGGCTTCGTAAGTTTGTCTGATATCTTTTTGTTTTCAAATCTCAATTTA
TTACAAATTCATTGCAATGATTTGAAAAAGCATTTTTACACATTGTATTT
ACAACAAACTCAAGTCAAAGTTTTGAATGAAGCCGGACTTTGCAATCACA
GTATGTATTCGTACTCTTGGATACTCGTGGCAGCTAAAATCCGTTTACTC
ATAGTACAAAACCGAAATAGCGGGATAAAATTCTATCGAAAAATCCGCTG
GCAAAATCGAACTAAGTCTTATACCCTGAGTGTTATTAGAAATATGTACT
TTTGCAAACTGTTTTCTCTTTAGGTCTTACACCTGACCAGCGACACGATT
ACACCGTACCACGAAATCCTAAAGCCGGACACTCCCTTTTACCAGCATTC
GGTCTTTGCGAGGTTGTGACAGCAGCCAATGATCTGAAGAACACAATTTA
CAATAAACATACTTTCGTATGTGAACTCAGCCAACATGTGTTGTACCAAT
ATATCTTGATCATCTTATGGTAAGAACGACCTCTTTATCTCAAATTTTTT
TTAAAACACAAGCTGAAATATCTTATATACTTCATTCTAAAACATGTGGG
TACTTCTGCTAATTTTATACGGAAATGTTCAAGAATCAGTATAGACCTTT
TCATAGATTACGTCACAAACATCACCTGCCTCGTTTTAAAATTATTACCA
TGGTGATTAACCCCCAGCAGATTTTATTAAACTACTCTCTATTCATAAAG
GGACATAATAAGGGACATAATAACCATGGTAATTGTTTGAATACGAGGCA
AGTGATATTCATGACATAATTTATGAAAAGGCCTATTTGCTGTATTTATT
TTCTCGTAGACAAAGAATTTTGACGCCGTTTCTTCCTGATATATTCGACT
GAACACCCTTTGTGGGGTTCATCAATAAGGTTAATAACGACTCTTTTCGA
CCCTTTTCAATTGTACTCTCTCCACAGGTACATCATTGTTGCTGGTATCA
TCATTTCAATAATTGGTTTCCTCATGCACATCTTCAGTGATTTTACTGCT
GCTTTCTGCATTGGTTTCCAAGGTCAGTCATTTTTATGGTTCCTTTCGTC
TGTGCTAATGGTAACGAATAATTAAACGAGTTATTCTTCTTAAATGTTAA
CTATGGTTTTGTAAAAGGTTTCCGTTAACTTCAGTTACAAACAATCTTGG
GAGTTGCGCGATGGCGACCAAAGGGCCTCAAAATGATGCCTCTCAGATCA
ATAATTTTTACCACTCTATTTTTTAAGCTCCACATAACTAGAGTGTTTTT
AAGCCACAAGGAGGAAGATTTGTCCACGGACTTTCACGAATATTTAAGGG
GAAAGACTTTTTCATCTGCATTTTCAATATAAATATCTTCACAAAAATAT
TTCATGGACGTACTATACAAATTCTTTTAACATATAGGTCGTGATATCAG
CACACTGTATCGTGCTTTGAACACACGTGAACGCCAACTGTTGGACTTCG
TACGCAAGAAGAACATGCCAGTCTTCGGAGAGTTGTTGGATAAACTCTAC
ATTGCCAAAAACATCAAAGTGAGCAGTTAGCTCTTTATTACCGATTCTCG
GGAATGATGAATCTTATCAAAATGACATCCCCTTCTCACAGACCCGGTGG
GATTTTTTCAGCCAATGGGGATAAAAATAACAGAAAAAAGCTCGATGGGG
ATTAATATTCCCAAATCTTTTATGGCCGGGGAATTCAATTCTTTTGTTTT
CAAGTCAGAAAATTCAGTGGGGATGGGAAAAGTATTAAATTATTTTGCAG
TGAGGATTGGTTTATTTGTTTGAGGATTTGGTCCCAGTGGGAAGAGGTCC
CAGTGGGTTTGTGAGAAGGGGGGGGGGGGTAAATTTTATCGGGAAAAGTG
AAACAAAACACTTATATGGCTATAAACTTATGGCAGAATAAGCCTGATTT
TTACAAACTTTTACAAACTCTAAGCTTTTGCCGAATCTGGATTTTTCTGG
TCTTTTCTGGTACCATGAGTGAAGATTTACGTTCCCTTTTTCGGGAATCC
CTAAAACACCCGGAATCTACATTTTAGGAAATCTTGCCCAATCAGTTCGT
CTAAAATCGATAATTCTGTAAATTTATATTTTTCTTTTCTTTATAGCCTG
ATCCATTGAGTGAAGACCCTGATCAACGAGCAGCGATGAGCCGAAAAGAA
CAGATGATGGCTGACCAAGATTATTGAAAAAGAATACCACCATTTACCAT
AGCTTAGTAGCTATAATCACCAACAAAGATTTTTGTATTTGTTAAAATTC
GGAGTAAAGTGCGTCAACTCAGTTTTTTTTATTTGATATTTTTAAGATTT
AACTTTTCTAATGAACCTTGTAAATATCTGTTTTTCGTGTTTATTTTCCA
ATAATTTGATCACACAAAATCAAGCCTTCCTTCATTGTAACCTTAACTAC
ATCGAAAGTTTATATCTAATCTAAGTTTGCACAATTTTAAAGATTTTTGA
AATTATTTTTGTTTATGCAGAAATTTGTCATAGTTTTTTAAACTTTTTAT
GATACATCGAAATAAATATTTTTTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072806TCONS_00072806Clytia hemisphaericatranscript
TCONS_00072805TCONS_00072805Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072805-proteinTCONS_00072805-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_84supercontigscaffold_84:253035..263110 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.1	0.22	0.32	0.17	27.82	25.05	114.19	115.55	93.13	72.09	71.19	81.92	80.82	70.12	172.32	165.72	91.54	93.8	71.71	71.91	22.35	23.85	22.61	24.89	30.48	30.55	4.13	5.31	59.08	55.72