XLOC_045128 (gene) - C. hemisphaerica

Overview
NameXLOC_045128
Unique NameXLOC_045128
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_82:436436..446863+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045128 ID=XLOC_045128|Name=XLOC_045128|organism=Clytia hemisphaerica|type=gene|length=10428bp|location=Sequence derived from alignment at scaffold_82:436436..446863+ (Clytia hemisphaerica)
AAATAGTTTATTTATAACGAGAAGATCTGAGTTGCATAGGTTGTTCTTCG GtggttttttttgatttcagaaGCCTTGATTGCCTCATAAGTAATTAGTT GAACTCGACCATGTATTGCTGGATATTGCTGATATTTACACATATTCTGA TGTACGGCGAAGCATCAACACTTCAAACATACAACTCTGGAATCCGATtc gaatgcaaaatatttcCCGGTTTTTATATCGGTTTTgaggaaaatgaaat attggAAAATTCAAATGAAACGTTATTGTATTTAAAAGAAGACAGTATGG TATCCAATAGAACTTTATGGTTTGTTGAAAAGCAAATCGAATGTAACAAA AATGATTATGATGGATTCTATCTTCGTTCGTATACTTACCCTCAATATTA TATGTCTTTAACGATTAAGAATACACTTCAATTGACCAGATCATCTGATT CAAAAGCATGTCTCATAGCagcagataaagaaaatggtaCAGTGACAATC GAATTCTCAAAGTCTACAGACTATTCCTTCTTTGGAATTAACGCTGTTAA CCATACTATTGACTTTGTGACTACCTCTATGGTAGATAATAACATATTTT TCGAAACTTGGAAGCCGGAATATAACGGTGAGTTATTGGCAAGGCTATGG TTCAACAAACCTTTTTGTtaagttaattttttgttttcattaccATATTG CATCGAACATACACTCCTTTTTTNATGTttagttaattttttgttttcat taccATATTGCGTCGAACATTCACTCCTTTTTTAAACGCCCTCTCAAGCA AATAAGGCCCCTCTTGAAAgaattctttttggctttttcgtTTACTAAGA TGGGCAAACTTCTCAGAAAGGAAAAATCTTTATCCGAAACTTCTTCATAA GAGAAGACAGAAACAGAAAATCTTCTTGATAAaagctttaaaggttttgt ttttagataagagtgctatcgtttgcttactcatcaattttaattcagaa ACGGACACGGATggaagacactgtcccgatatgaaatatgtgtctgagat gaaacgggaacatttatgtaaaaacaaaacctttaagcttTAAGTGTGTA ATaatctaaatattttcatttttcattttagcaCACCAGGAAACAAAGGG GAACTGTGATAGTGGTAagctttttctattgttttatgtttGCTTTTATA AAAGACCTTATGCAAAATCTTAATGGATTCTTAcagattttaaattattt tcatttgtgTATGCAGTTGAAACAAAATTGGGTCAAACTGCGCCACCTAT TAAAGAAACTATCTTTGTAAAAATTAAGCGAACGAagtgactacaaattg tttggATATTTTCCCTCTTTTTAGCCGAAAATTGCTGATTTAGAGTGAAA AAACACAAATGAGCACAGAAATTAGCAATCACAGACACGCTTTTGCAGGG ATAAATGACTaacctatactagacgtcacggctTTTTTTCTACGCTGTAA CGTCTAATCCACTTTGCGACCTTTTCGAATGTTTCACTTTAAAGGTTTGA AGCTCTTGTAGTATCAAAAAATAGTGTATATGTATaggaattgcgaagcg atccaggcaatcactcgattcgcaagttgcaagcaaaatatttatagggt cactaGAATCGTAAATACAAACCCTAGATACAACTGCTCAGGTCCAGGAA GACTTTGCTCCTTTAGAGATTTACTCAAACACTTCAGGCGTACAACAAAC TTACAACGTTTACTTCTACGAATTTGAGGAAGATTATACAAATTGTTTCA CAAATCGTTGGAAAATCAGCAATTTCAAATGAATGTGACTTATataccct aaaaatatttctttaatccATTATGCTCTTCTNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNCTCTTCTCTACTCTCtaagaatattcaataaaaa gttcaaaaattgtttttgctcGGGAAAGTTTGTCTGCCTTAAGCATTGAG TATTTTTAGTTATTAGTgaattagtttttgttttgaacttgttTAACTTC CGGTTTTGAATTCCTTGCGTTtgaaatcgaactttcgaattataaaaaga acattcgaaaactttttttccaaattgcaattttttgatacaccccttaa cgaaagaactaacataaacacccctgtgtcacatacCCGCNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTAAAACATCAC Ccggtttattgagacagggatgtaaaagaaggaggatttcaagactagaa tttaatggaaataaGTCGACTtatacaatttcaaaattcaataatcgTAC GCAGTATAATTGcatcataaattctgaaaaatttaacaatgttctaaaat tatattaaaactatTAGCGCTGTAAGATCTTGagatgaaaattatgaaaa accagataaaaaataaagatctgagattttgaaagaattcttcaacGATG ATACTAATTGCTACTAATGCTCTATATTTTACTGGCtgtgtattttttca aagttgggaaatCTAAAGGCTCTTAATCTTAAGTATGTTGGAGACAAGTA TGACAAGTCTTTCACCCTTGAGTTGTTGACAAccaggagcaaactcttca cataaacTAGCAATTAGCTTTCGCTATGATGCTCCCGATGACAGGCATTT GACAGTGATTGAtcgaaattcagaaaaggcgaaatgccgtgtttattttt gtcagaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNTAGgaatagagaagaagaaactgtcaatagataatttgtaataaatat cCAGGTGATGTCAATCAGACTGTTTGATTACTGTGAAAAAAGGTAATCAC TGAAAGGAAACTGGTATCGCCTCCAAATAGTATAGCTTTCTggtaataaa attgtaaaaattcaaaagtcaaaaacatataATTTACATTTTAGCTTAGA CAAAGTGCAGATCAAGAAAGGTCTGCAGTTTGGAGGCAATGTAAAGTTTC CCTCAAATGATGCAAATTACACTTTTTCACGGGTACCAATCTaatctaaa attttatcaaacgaTAGGTGATAGGTGTTAGATTACcgcaaccaaatcga acagtcacgaaactaaaagattctggtaaagttgaattatgttcgaacga ccctgccgattccccggACTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGG TCACTAGGTTACATCGTCCCgttcttgaacaatttttcgccagctcgatc cccagcacggcctcgtgaagcaacataggctcccttcgggagcaaaaagt gaaaaaaaaatctgtgacttttttctcggctgtattaattgtagcacaga aattaaaaacagttaaagtgcatcataaaaataatgtcaagttTTGTCGA TGTATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNgtattttgacattttacaagtcat taacattaccattaccaacaataaaatcctttaaaatacaATCCCATTTC AATGTTCTATTTCCCTGACCACCAATAcgtattcataaacaacaaacaac aaccacgGAGTCCATATCATCGAGGGTGTCGGccaagcaaaaatttaaaa acaacaacagagAAACAGTTCTTCTTCCACTCAATAAGGGaaggaataaa ttcttccaggttaaccatatccaaaatattttatctttttcccatttcaa aacatactaaaattcCAAATTCATGTTGTGCTCTCTACTACCAAGATCCA ATCATCTAAGGAATGGTTCTCCCACCATCATATAATACAGTTTATTTTCC AGCTTTGAACCTCTTTTTGCAACGAAGCAACAACTCCGTTGAGGCTGCTG TCCTGTTGACGAAgcaataaaaattccatcttctttctttctccagctgc tttcttcgtttcttttcatcaagcaccttttcttttcaaagcaccaacgt ctcttttcaaaaaaacaacaatgattttatttttcaaagacagagtcaac attcgaattcagagtcaacattcgaatatggaaaagttcgaaaatctttt cccgagtcaatgcaacgacttcttgaaaaacgagcgtttgaacgcttcca gcccgcgctgattttccaatctgttttttaaatttcctaatttaGACATT AGGGAGATAATCGAAACAGAAACTCAAGGCAAGATTGTCTCCGCAACATT TAAGATCTGGTATACACCCTCTACACTAAAAACCAATTGTTCCAAATTTA CGGAAGCGACGGATAGAAGAAATGTATGAGAAAGTGCCGCCTGATGGATC GATATGATGTTTTCAGTACCGTAGAAAACGCACATCAATTTTTCCTTGGC GCTCCCCTGGTATatacactgacctttatataaccctggaccaagcaata tctgccatctttgattggagtttttttagaattggtacccaaggagaagc cattgcaatgctaaaaattaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNcgacattagggtaccaattttcaaaaaactc cgatcaaagattttgcttggctgggattgagaagctttgtccagggtata taaaggtcagtgggtatatagaatttaaaggtacatgcacacgatatcaa aactgcttcgctcatgtatattcgcttcgcaaaaatcgaacttgcgtcaa aacacttgaaagacttctaatcgtcaaagtggaactcactaagaaacagg atgaaaaatcccggtttttggtgaggtttttggtgaggtgctcgctgGGA AATGACATACTAGTAGTGGAGTTTACTATATCATTTCCCTGCTTTTTGGT GCCCCAATTAAATTGACGCTTAGTTTGCTTGAAATAAACTACTTTGATCA TTTGGTCAACTCGTTATTAAAAGACGTAGGTCAGTACTTATCTTCCAGGG CTACTAGAAGTGTCTTATCCTAACAAGAATGGCTATTGTTTAAGTTTTGA AGCTCAAATTCTTGATAtccgtaagtcatttttctagcggtaACACCCAA GAGAatccgggatttgacctctctctgttactaaaaatagaaacacggag ctcaaaatccggcttttttcGAATGCTTccccgttaaaaaatatgacgtc atcttgacttacgcatatcaaaaatacagtagcgtagacaagaggggcgc aaaatttgtgtaggagagtagATTTTATGACACTCTCGTTATCTATTCAT Aattaaaaaagataattacagtgtcataaaaatctgctctcccacgcaaa ttttgcgcccctcctgtctacgctactgcaaATAGGCCCCTTGTGTATTT TTTCGCTATCtaataaaatcatttttcgaaatggaaaaaaaaacagatct ttttcgaaaatctttttatttctcattatacTTTAGCTGGCGGAGCATGG AGCATATGGAGTGATTGGAGTCTTTGTAGCTCATCATGTGGTAATGATGG AATACAAAAAAGATATCGAAAGTGTTTCTCTGATCAATGTTTGATTGAAT TCGATGTGGATATCAAAACTTGTAATCGTCAAAGGTGCCCAGGTAgctaa aagtaaataaaatctGACCCTTATATCATAGTACCCAGAGCCACTGGTGG TACCATTTTTTCATGCCATTTCATACCATTTCACTGATGGGCGTTGGTAA AACCCTGAGCTCTATCagaattataaaaaagtgaacGAAGGAACTAAATT CGAGTTTGTTATTATACGACTTCCAGGTACCTTTCTTTTTATGATACTGA GAAAAAGTTCTTTCCTAGTCCTATTTTTTAAACAGGTGTACTGATCTAAT TGTTCTATCCCGAAATTACAAGAATTCTAGCTTTGTTGCCACCGGAGGAg gcctaaagcttctgaggatggcattcatagcttcacgcataaggaagttg ggcaaacatctcataattttgcgcgcgtttttcagtattttagttcaaCT TAACGGTAAGCAGTCTTATCTTACGGTcactctattgttttatcatcatc aaaaagactcttgaagacttttccggagttattttgatctgatgaCTCAT TTTGAtatgtcagtttgtctttttcttatccctggagagttaaatgaatc taaggaaattcccttttctgggaaattccctttttataccacaagtagtt gttaagcgctcttcataggttaaaaatattactctactcaaagtattcga aagttgctaaacgtgtacattagtaaaatcagggatatgttatagcggag ctggataacgcacatttaaaaaagccttgttctatctctgtccctcacat taaaatttgatatgaaatttaacttttttaattacaagctcgtgaaattt ggatttcctcttagccaatgattctgctgctgcatttatcgttcaagagg gtctgtaaaaaattggttaatgacaatttaaaaaaatgagaaacattgtt ttcattagtaaagttataagaagtttcttctctgatattataaatagtac tttttcatttgaaataccgcgctacaccacggggtgcctcactttctaac taatattttcagatagcaagtcggtatgtctgattatggaaaaaatttca ggtcaattgaaacaatatttgtcaaaatatttacgtctgaaatttttaaa gagaaatcatgaaagcttctcaaattcataacacgcgctgataaaaatag atttcatttacaaggaagcttttgggttatcttctacaaatattattttg atgaaaagcgggaacaccatagcaaaatatgtgcaaacgtactgcatgaa tactttgtctgcttcatttttcataaaaacagaacactcaaggggacaga gatggatttctattatcaacagtttacaatagaaaagacaaagaagcaat ccgctaaggaattctcgtccttcatccagctccgctataacatatccctg gtaaaataacatatgaagagcagtatcctcagatatacacgctttttata ggaaaaaacaGTAAGTCATAggattctggctgggctgctcttaaatttat atgagtttttcagccttaaatgtcaatgttaattaaaatggaaacatgta cttctcagtaatttctgaaatcagaggttcagattcttcttaatttgttc ttacgttttggccaaatttcagcctcgtattcttatgaaattgttcttat aaaaaacgtgtaggacaAGGCACGGAtatcactctaagtagactgtaaat cactcccttgacacatttgttagcagttgaaagaattttgtctcagatga gaggtcactcttaacaaaattactgtagggctaagatcattccttttgaa cacAAACTCAACTCTAtatgttcgttttgctgcggtggcaccttaatgaa agttatggctagtataTTTACTAATCCATAGCGCattattctttattttc ctcaaaataactttatataattttcTAAACCTAAGCCTCTAGTGAAGATT TAAGTTTTGATAActaaataattttaattttcgatttttgattcCAGTAC AAGCAGACTACTACACAACGCTTTGGAAATGTTATTACTGGCCTCCCGTT CATGGTCAATGGAGCAATTGGTCAACTGTAAACGAAACNATGTTATTACT GGCCTCCCATTCATGGTCAATGGAGCAATTGGTCAACTGTAAACGAAACA TTCCAAAACGAGACGACGTGCCCAGGGAAACTTTCGTTCGCAACACGACA GTGCGATTCTCCGACACCAGAGTATTGCGGAATGTATTGTGGATCCAGTA GTATCAAGATTGATATATTTCCTGGTAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072703TCONS_00072703Clytia hemisphaericatranscript
TCONS_00072704TCONS_00072704Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072704-proteinTCONS_00072704-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_82supercontigscaffold_82:436436..446863 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.94 17.53 11.07 10.94 0.41 0.19 0.64 0.61 2.4 1.31 1.83 1.53 16.04 14.5 5.23 6.9 1.54 2.53 12.28 10.49 3.96 4.07 5.26 3.2 1.71 3.36 0.5 0.25 1.07 2.58