XLOC_045122 (gene) - C. hemisphaerica

Overview
NameXLOC_045122
Unique NameXLOC_045122
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_82:334209..345746+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045122 ID=XLOC_045122|Name=XLOC_045122|organism=Clytia hemisphaerica|type=gene|length=11538bp|location=Sequence derived from alignment at scaffold_82:334209..345746+ (Clytia hemisphaerica)
ATCCACTAATTAATGCAACTGTATCGGTGATGTAATTCAATGAAGCGAGC GCTTGTCGGTTGAAGTGAGAGCCAATCACAGAGCCTGAAAAAGTACAAAT AGGGGAAGCAATTCAAATTCCAGTAAACCATCTGCACAATTATACATGTT CATAACTTgtctttttagaaaatataaaatgaaaaaaattaacaaagtaA CGAAAACTAACCTAGTGGCGCACCAACATATTGCCAAGCATCTAAGCTAA CTGGATTATCCGTATTTTCAATACATCCCCATAACCGATATTAAAgccat caaaacaatggaagTTGAAGTAGCTGTTTTCTCTGTCACACGGAAAAGCA ACGTTTAAATGCTGAAACAGCAAATATCCAGTCCCGTTCCAGAGAGACCT GTAAAAATCCCGACAACAAAACCTGGATAGAATAAACAAAAGGAAAACAC GTGAGTATAATTAATCATCAGCTTGCGAGACACTGACACACAGTTTTTGG ATCGAGTGCGTTAAGTTTAGCGTGAACCACTAGGGAACAAAGCCAGCGCA CTCTCACGTCATCCACGATGGATTGTGAAATCGATACCTAGCACAGTCAC CAACATGTTTCTTGAGTTTCTGTATGtattttcttttatgaatacaCTAG GGAATAGTTACAAACATTTTAGCTAATTCTCTCCAACATTACTCCCGTAT GAATNCAACAAAACCTGGATAGAATAAACAAAAGGAAAACACGTGAGTAT AATTAATCATTTTTTACAGTGTGTTGCAAAAGTGGAGCAAATTTCGAACt gcattctttttttataagaaactagcTGGCTGGCCTGGCTGctctttttt ttgtgattttcagcTTAAACTTGCTTGCGTAAAATCTTTCATGATAAAAA CTATGTAGTCTTCAGGTTTAGCCCTCTTATGTGTAAATAACTCGAATTAC GTTGGGAAGGACGGTTAGATTTATTCAGTCTAGGTTACatatttgttgaa tttgtatagtactagccgtcccggcgtcgtccgagacgacttcttactcc ttttaatacgctcgctgcgctcgcttttctatttttcagaaacttgtagg gatttgtatacaaatgtacttattttgcgagaagaaatgttcttaaattt aggcCTTTTTCGTAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAtcaaaaaggcgcgaa aaaaattgccgtgtatttaaaaatcgctagcgaaaaagcctcatgcgaga atgggagagttccgatttaagcgtattataatatagattaCTCCTACCAG TTTTTTTCacaagaacatctaaaattttggatgttcttaaacttttgagt tttaagcctgaaaatgttctctaaatatttttaaccccattttgtgagtg tttCTGTTCAATTTCCTAAGATTCTGGGTATTTCATacagtccataaagc cttaaattATTATAACTATAATTATAACTCTTGTTGTTGATATTTTGACC ACGGAACAGCACGGAAACCTTATGTTCTAATATATAGTTTGTTGTTATAA CAACACGTGTACTCACCTAACATGGATTCCACCAATTAAATTGGGGTATT TTCTTGAAAGTTGTTCGCTTGTGAACtctgttcaataaaaacaaagcgAA TGCGAAAGCAAAGAACAATGAAACAAAACCCATCTTTTTAACAGGAGGTG TGATTCTGGTATCCAATTCTTCCAGCGCTAAAACTGCAAAATATGATGAC GCGCCATTCTATTCGTATCTATAAAATAAAGTGTTTCAAATTTGCACGTG TTCTGTTTAGTTCTCTCAATGAATTTGACATTGGCGATGTGTGGTAGCAT TGTAGTGAATCAGCGGCCGATTTCAGGGGCAACTTTGAACAAAGGGCGTC AAAATGTTCCTATTATCGTTAATTTTGGCAGGCCCTTTCCATTTAAGTCC TGGTCaagccaccacgctactggccAATCACGTTTTCGCAAACTCAATAT TACACAATCACAAGTGGTTAATCTTCTTTAACTTTAATCTGAGCAAACAC TCAACGATCGTAATAAATTAGCTTATAATTGGATCAAAGTGATTACTAGT TGTGCAAGATAACTAAATTTCCGGAGAAACAATATCTGTGTCAATTAAAG GCTCGAAATAACTTAAACATAACTCGTTTTTTACTTACGTTTTTCATTAC TTAttagtcaaccagcaataatttttgtgtgatatcttttgattggatga atatttttgaaatttttttttacagaaagtaTGTCAACTTTCGAAACCGG TGtaatgtacactttttttttaagaaacacacttttaagaaacacgaggc tcagaatgtctaaaaactaagaaacatcttagaaacatgctgaggttgag aatgagaaaataacattttttaattcggtttttttaagaaccttccgatc caaaagtttagaaacatgtaagaaacatttaaggctcaaatcTCTTAAGA ttccgatttcttaagaaacattgaggctgctttgtaaaactagtttctta aaaaaaaattgtatgatAATTATTGAAATCATGTTTTCTTTAAGCAAAAT CAGCAAATTGTTTGAGattttgtgcttataaaaaatgtattttttcgCAA AGTCATGTTTTATTGCAATCATTACGAAAACGATGAGAaggcaaaaaatt aaaacaaaaggtTAATGGGATCGAAATTGTGTATAGTAATTCTTGAAGAA ACCTTTAAAAAACATTCGCTTTTGAAAAGGAAAACTCAGTAATCTACGAG AACGGATATCTGCTAGGTGACttgaaataatttcaatttcgaacaattag attttttatttGCATTATGGCGAGCTCAGGTGTTAGCTCTGAAAAAGGAA ACGGAGGAAGGTTTGGAAATGTCTTTAAGTTTCGAAGAACACCGATGGAA TTTCTgaagaagtatttatttgaaGGTATGTGAAATTCATTATTAGGGAA ATTACCTCGTTGACGGTTTAGAAAGATAAGCTTTTATTTATTATCtttaa ataaaccagccgaggctggaaggtcagccaatagagcttagctaaacaga tgtaagagatgtactgaaacagagtagactgtCAGTTGTCTGCAGggcca atgaggtacgtaaaaactgactactattcagtcaaagccaaaatttgaca aggtcagaaaaacataatttgcgTCCAGAACTGTTGAACAAATTgttaac acaggttaatttataggacctccaggtaggtccaaaaatgtgaCTGATCA TTGTCCTACTTTGCACTTGaagcaaaatcacaaaatcttgaaaaacatct tgaaaaacacaatttgcatccagtctgcgtaaataaattttgtagtttag taagGTTAAGCTACACAACATGCACagaaccatcttgaagactttgctgg tcgcaaatgataatcgaaagcaaaacttaaaattcatagctatgcgggga agctcatttttcccccgttttatttcaaactcacttttgattggtctatg aatttgggcgatcgctttacctccttggcggaataaacacacgaccataa taaataaattcaacagggcagcggagtagcaattaatttcaactgggagt actctcttctgtgccaagcactggcagtgttttttttactttaaaacaat gttaaatgaagaccagatggatctgtttgttatggctgtgtaAGTTGTGA TGAGAGTGTGCacgttgtgtaacttgacggtatcattcattaaattctag aaatcatttttcataactttctgcagtctgCTTTCTACAAGTCTGATAat agatatgtataaactgttatcgccactccttccattccatcattcagtca aaacgtgcgccaaggttagaaaaaaggttacaaaaacacaatctgcgtcc ggaactgcgtgaaaaatagtttgatcaatttcaacaagaactgtatatat taatattaatataattgatcaaattccaaagaccatttttcataattttg caagtccaataataggagatgtgatgtcatcatttggttcccgtcgaATC TGACcaaccctgatttacggtcagcaggtagagttggagagtcagaaagc ttttccgctgctttgctggatttccactgtcaacctctgcacgctctgtg tttacaagttttcaaatcgaagtagagagccgcatgctaatggagagtaa accgaaaaccagtttatccacggtatctcaattttaaaattcggatcagt ccacacggattccctttcaacaagatgtagctgcttcttaacagaaaaat attttcgaccaaACGAATCTCACTTTTTAAaatagaaatgacgggaacca aacaaatttttgcgattcgccttatcaaacacgtccaagtccaaaaaagc acgattgcatccagtctttatcaaaattagacagtagctgtacttttgta aactttatcaaattccagtaacattataacaccatcaatcccccctaaag gcaaacaagaaaaataggtttttattgcaaaaactattaaaaagcagcag taaaaagtatcagaaaattcaacataaacaaaaacttgagcaaacggaaa tactttggtacaacactgacttatcacatctcgcttgagccgccatcttg aaacaccacattattatctgtaaaaacaacgcacgctaaaagtacccaaa aagttaacccgatcagaagaaagtttagaaatcaaagtgagatcggaaaa tcggatttattttttgccgtcttatgatgatggtggaaaattttacctat ttgaatgctcagcttaggctgaccaaaaagTAGTCAATGGAATTAAACAA ATGACCTACTTAGTTTATTATCTAACtataatttttggacctacctccgg gtaccccggtggaggttctataaattaactcatgtccgttcgttcgttcg tccgtccgtccgtccgtctgttaccagcttttctcaggattggctcatta gttttttctgattttttgcacaatgatgcaAAATGGCAATGCCCAGAACG TGACGGAGCCCGATTTTTGAGAAAAtttttttttgggcaaatttgggcca aaaactacctaaaaatagggttttttggactttgtgcaaaatcctgtcat tacttttttctgattttttgtacaaagatggagggcaagattctctaaag aatggctgaagtggtttttcccggaaaattcttattcgcctttaaaaacg gattttccgtattttggggaaatcccctttaatcaaataagaaaatatag cttttctcaatgttgactcattatttttttctgattttttgcacaatgat gaaaaatggcaatgcctaaaatgtgtcggagcccgattttcgaaaaaaaa atttttgggcaaatttgggccaaaaactacctaaaaatagggttttttgg actttgtgcaaaatcctgtcattacttttttctgattttttgtacaaaga tggagggcaagattctttaaagaatggctgaagtggtttttcccggaaaa ttcttattcgccttaaaaaacggattatccgtattttggggaaattccct ttaaccaaataagaaaatatagcttttctcaatgttgactcattattttt ttctgatttgttGCACAATGACgaaaaatggcaatgcccaaaatgtgacg gagccagatttttaaggaaaatttttttgggcaaatttggaccaaaaaca gcttgaaaggttttttgggcctgaatggttaaagtgattttcgtatttgg ggaaattcctttttaccattttacattattcaacacacaagctttatttt tccattctgaatttttgtacaattattgtcacttttttcttattttcatc tgatgttaatcattaagtaggtccattcagcatgttgcttgtttctttTT GGGTTATAGCACTCATTTCTATACTCGCCTACTTTTAAACTGGAGctgtt tataatgcgtgtaatacagtaatataggcgtcatatgataatacgattat tgttacgagATTTaattgtataaactaaaattgttccctctaTTACTTTT TGCTATATTTCTAACTATgtttgaattagtcgtctagctcgCTAGACAAC TAGCCTACTATGTATTTAAAGACTATTGCGGATTTTGATTCATGTTTTAA TACTCTGCAGGCCAAGCATTACAAGACAGCTACCAACAAGAATTAGAGAA CATCAAACTAGATGCTTTACCATGGCACAAACGTGTTTGGATCAAATACA GGCGTATTTTTGGAATGCTCATACCagctttatttttccacttGTTTTGG TGGGCATATTTTATCAAGttcaatcattttgatttgtttaacTCGAACTA TCGAATTTCAATAATGGCAGTGTTTGGTTCACTAATTGCAGGTACAcgtt ttgtttataagaacagactatataagaataacacaaggcttcgatggtca aaatggtaagaacatattaagaacatattaaggctATACAGACTCTAAAA TCGCCAATttcccaatttcttaagaaaacggacaaaaatgctcacaaaat ggtgaaattaaaaacatgttaagagcattttaggCTGAAAGCTTTCctaa ggcttaaaaaattttggatttttttataaaaaagatgtgTATACAATTAA CTATTTTCGCTGTGTCACAGTGTATATGATGTCTTTTTTCGTGCATTCAT CTCTCTTCCTGCTATCATTTATTGCTTAGTCCAGCAATATCACACTATCA CCCAcgtttttattttctaagaacTAGAAACACTCGTTGCGCAAATTTTG ATCAATAAATTTTACCATAAGGCCTATTTAGTGGAAAAAACATACGTGTC CTAATTAGGGGGTAACCTATGTATTGAGatgtatttttttcaagatgcca tatatttttgtaaaagctaaaacacgccgaatcgacagatcgctaaaatt tatccgcgcgaaatttctggttatattgccgtcaataatgtaatacgagt attcgctaaaatttatccacgcgaaatttattgaaatcgtgattcgctaa aataaatccaaaaagaatcattcttgactcgctaatatacgctaaaatta gtcttgctaaaatttctacgattaaagtagtcgACTCTGGGTTTATCACA ATCTGAGATTTGATATAACTGCAGATGtaaaaattcatgaaaagtCTAGG CTTTCATTACTCTGCCAATTTTACAGGTTTAACAAGTGAAGGTGGCGGCT CCGTTGCTTTTCCAGTGATGACTTTAGCCTTCAAAATCAAGCCACATATC GCAAGAGATTTTACATTACTTATTCAATCATGTGGTATGACTGCTGCCAT GTTCACCGTTTTCTGGATGAAGGTAGATTGGTCGTTTGAAAAGAAGTTAT AAAGAAgtaacaaaaaaagtttaaacaaaGACGAATCGGTCTCAAATGCA TTCTTCTTTCGAGCTAGCCAAAAGCTCCATTCTAGATTCGTCTTGTTGTC ACGGACCCAAGGGAATggcttcttataaaaatgcgTAAGATTGGCACAtg gttttgtcatttttgtgcAACCTCTAATACCCGATTCCCAGCTGAAGTAG TCAAACTATATTTATTTCCCTAATCCCCGAGACACTTCAACATGTATACT AtaatagttttttttatttctagattCGAATAGAATGGCGCGCCATCGTA TTTTGCAGTTTTGGTGGTTTATTTGGCATCATTTTAGCACTGGAAGATTT GGATACTAGAATCACACCCCCTGTTAAAAAGATGGGTTTCGTTTCATTGT TCTTCGCTTTCGCATTcgctttgtttttattgaacagaGTTCACAAGCGA ACAACTTTCAAGAAAATACCCCAATTTAATTGGTGGAAAGCTTTGATACT GATTGTTGTCGGTAAGTCGGTTCTATACGTACAATACGATTATTTTACTg tataagtaagtctgcgaccgcagtcggaggcgacccgaagtctcctcttt cgatagctatctacccgaaggtaggggagggcgccactctttctccctgg atttctccacttacccttgatccttctcttagttgctgagcatcaagcag aaaggcatcaagtaccaatttgggaatctttggtatgacccggctggggg ttgaacccacaaccttgcgaaccgtagccagttgctctaccactgtacta cggtcgctttTATTTTActatatatttcaaaaaatagagAGCTTCTTGAT CGAGTTTGGAAAACAAATCtcttaaaaaggaaaaataaattagCTGGAAA ATGCATTTAAGGCCGCTAAGGGATATTTGCTTAGATGGAAAGTTGAGACC TAGACTTCCTAAGACTGCGTGCATTCCTATCACCTGTTAGTTTTTTGTTA TTATAACAAATCGTATTTGAGGATCCTGGCAGCCTAGACATTTCTAGATT CCTGATTTGCTCATTTCCCTTTGTTTTTAGGGTTTGTTGGTGGTATCTTT ACTGGTCTTTCTGGAACAGGGATTGATATATGCTGTTTCAGCATTCTAAC GTTACTTTTCCGTGTGACAGAGAAAACAGCAACTCCAActtccattgttt tgatggcTTTAAATTCTGTTATGGGAATGTATTGGAGGGCTATCATGAGT GACACACCAGTTAGCTTAGATGCGTGGCAATATGTTGGTGTAGCCATACC GATCGTTGTTGTAGGAGCTCCCTTAGGTATGTCTATTTTTTGACAATTGG TCATAAAGTTAAACTTTTTACCAATGGCTctgtaaaagaaaactttactT ACAAGCTAGATATAAACTAGGGACATCTGAAAGAAGAGTACTCCACTAAC CAACCATTATTGGCCACGGTTTATGATTGAAAAAACTTATAAATATCCTT GTTCACTGTTTGAATTTTCAGGCTCTTTGATTGGCTCTCATTTCCACCGA CAAGCGCTCGCTTCGTTAAATTACATCACCGATACAGTTGCATTAATCAG TGGATTCGCTATCGTTAAACCAGACAAGAAAACTGTGGGAATCTCCCTTG GTATCATCTTTGGTGGATTCCTTTTCTATATCATCATTACGCTGATTGGT GGAAAATTGATGTCTTATGTTTTGTCAAGACAGCAAAGGGAATCGCCAGA TGATGACAGgattgaaaaggaaaaagaaacaaCCGAGGACAATGTATAAA AAATGAACGCTTCATAGTCTTCATATCAAAATATAAACAATTTTGTtcac aaaatcgaaaaatttgttgaccaataaaacaaaataaaagggaacaatgt ttgaaaaaatgaacgcttaatatcaaaatatggaaaattttgGTATAATA TGTTCACAAAATCAAtgcaaatttacaaatttaaaatataaattcttATT ACAATTATAACAGCCTTTTAGCTTTACATTATTCTGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072693TCONS_00072693Clytia hemisphaericatranscript
TCONS_00072694TCONS_00072694Clytia hemisphaericatranscript
TCONS_00072695TCONS_00072695Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072695-proteinTCONS_00072695-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_82supercontigscaffold_82:334209..345746 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.55 4.4 3.35 3.3 6.16 4.31 8.49 8.34 11.9 11.9 16.91 11.24 19.85 20.64 9.47 12 8.88 10.39 10.52 10.66 9.9 8.89 10.18 7.27 9.66 9.21 9.72 8.08 8 8.49