XLOC_045119 (gene) - C. hemisphaerica

Overview
NameXLOC_045119
Unique NameXLOC_045119
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_82:247178..251505+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045119 ID=XLOC_045119|Name=XLOC_045119|organism=Clytia hemisphaerica|type=gene|length=4328bp|location=Sequence derived from alignment at scaffold_82:247178..251505+ (Clytia hemisphaerica)
ATAACAACAAAGAGAATCTCCATTCTTGCTTAGAAAGAATCGTAGTATCA TGGcaaccaaaaagaaaaacgacTTTAACCACGTGTGGAACTTGTGTTTT GATATGAAAGTGTTACATGCTCATCCATTCCCACTAAAAAAATATGTAAG TTTGATTTTATCTTTTACATCAAGGTAagtaattttggcgggaactttaC TTTGGCTATTTTCTTTTACCTTTTACCTTTTACCAACCTTATATTAACGA TGTTATATTTACTATAGGgatacaaactttcgcgagcagaaactttggCG ATTTTAGCCGTTATTGCGAAagtaaatatctttgaaaattcttggaaggg ccattcgcgaaagtttatcctcgcaaaaaattcttaacaaaatagaaaat ctgtgaaacttcaaattttgaataaattgtAAGATTTATATGACACTTTT TAGCTTGTTAAACCTCAGAATTTCAATCCAATTCAAAGTCAGAATTTCAA TCCAATTcgagaagtatttgtccctctaagccattttttcatgtcatgtg aaaattttcatttttatgtctttatttttaagtcgGGTGAAAGTTTATGT Tgcaaatttcgcgaattttcgacctcgcgaaagtttgtacgcctaaagta aggAACGTCCAGCCACCAtgcaaatatttcatttttaagattaGGTGAAA CAAAAATAACATAACGATACACCTGCGTGTGTAATCCTAAACCACCCAAC GAAGGATAGGAGACTTTCTACAATTAGAATCACTCTGCGATTCGAAGGAA TTAGATTCTCTGTTTTTGAGTGTGAATTAGTATACAACAACGAATCTTGA TATAATCTTGTCATCTTCTGTATTCTTTCAACAATTTTAGCTTAAAGATA TCAGTAATGGAGCAAAAAGAAACGATAAAAACAAGGCAATTCATATCTTC AGTAACATACACCATATTTGCATTGGTTTTATTGCGTTTATTATTGTTGC TGAATAACGACAGCTTGATTATAAACATCAGAGGTTTCGATGAACCCAAA GAAATCCAAATCATACACATCGAGAAGCGTCTAAACGCAATAACCAAGAC GTATacgaaagaaaaatatgatttgAACACTTTGCAATTTCAAATGCAAA GTCTTTGCAACCAGGATACGTTGAATGATCCTTGCTTGAAAGTTTTACCC TGGAAACTTCGTCATAAGCGGAGTGTTAACACTACAAGTGTAGATCAAAG TATTGTCAAACTTCTTGTGCGTCCTTTAGGATATCCGAGCTTCGTTCAAA TTATCTCCCTAAACACACTCGGTGAGACGCAAACAACTGGAGGTGATTAT TGGGATGTCAAACTTTGCGGAGATAAAAACACAACtctaaatattgaaat gatagACCATGACGACGGCTCTTACACAGGCTTTTTCTACCTACCAGAGG ATCTGATGATATCAAGTAGtaaatttgaattgaaatatttgctgGAATAC AGTCAATGTAACGGATTGAGAGACATGCCGGAAAATTGGTTCAAAACAGG TAATTTCTAATTCGTGAGGTACAATTTGTTCTTCCCTAATAATAAGATTT TTCATGACAAAAGACCAGCACTcttgtttttgatgaaatttagtAGTACT GATAACTTTCCTTAAAATAAAAACCTTGAATTTCACTTTGATTCATGGCA CATTTNGAACTTTCCTTAAATTAAAAACCTTGAATTTCACTTTGATTCAT GGCACATTTggcaaatatttttcattttaatctCTCATTTTCAAAAGGGA CGAttcaaggaaaatttcaacGAGATGGTTCAATTGGAGACCATGATGAT TTTCTCCATCAATTACAAACcacaaaactattgttccataTACCACGTGA TCAAAATGAATTCAACTCATTggtgcaaaattttgaaatttcccaaaAGA GTCAAAAGCCTTTCAATAAATATTGTGGATTTTGGCATGATGGCTTGTTC AGGGAATTTCATCAAAAAGATGTTGCTAATACAGAGCCTCGTTTGAATGT CCATGcacctccttttcaaacattaaaAATATTTGGAGATTCGATGGGAC GACACTTCCACGAATCAATAGTTGCAAATCATTCTCTATGTAAAAACTTG TTCAAGAAATGCGATTTATCTTACACGTGGGTTTACAAAATGTACAATCG AACCAAAGACTTCCATGATGGCGTTCATATTTACGACGATAAAGacttta accagactcattatCTGGAAGACATTCGTAGAGATTTATACTCCAAAAAC ATGAGACATGACAAAAGTGTTTATTTGGTCAACTTTGGCGTCCATACTAT TATGACTTTACCACTAAACAAGCTACGTGAACTTTTACAAGCATTCTTTG ATCTGATCTCGAATATGAAAAAGAGGTTGGAACCGAGAGAAATACCCCTC ATTATCTGGAAATCAACAACTTATCCCATCTTAGAGAATTTCAAGCCGAG TACAACAACTCAATTACGATTCTTAACAAAGCAGGTTAGTGGATAAGTTC AGGTTAtacagaaaattaaaaaagctcCATTCCCCAAAATTCCCAcgttt taagggctctggtcatagtgaaaaatcaatttgaagataaaaccttatgt tttcgcttctttgacatgtttaagaacaaactgcttttgaaaaaatgaat ttaagtaatcacatcatgagtaattaaggaataagtgtgacatggacctt aataaaacgtcataacgacgccATTCATATACTTTCCACACAAAAGCCTA ATCTCTTTGGGGAAATCagtttattgtttcaaactttttttaagttaatg accaataatttctttatttaggatttttcgaaaaaatttctatttggcta catcccaagttatagctgttttcgtatggaaatttagtggagaaaattgc caaaaataaggttttttggagattttaaagaaaaagatacTGTTATACAT TagtctttttaaaatgcagtaATTgacatttaagttggtgtaaaatcgaa aaattgggtattaccagagcccttaatttcGAAATAGACCATTACTTGTT CGTTAATTTTGCATTGGTCTCCTAAACTGGTTTCTAGTTCTCAGACAGAG GCTTGGATGCCTTAACCCTATGGGCACGCAACGTCTTATGGACATTCAAT GGATGGCTTTAAGACCtttggacgtcctagaaacgtacattagacatcca aaagacgtttgtgcCCATTGGGAACATTATATCATCTTatgttgttttca tttttatttcatttcagaGAGTGAGGTATTGGAATTCGTACTCCCTCCAA ATGATGAAAAGACGGCACATTCCGATCCTTGACGTCACTACCATGGCAAC ATCGTATCCATGGGGTCCATATGACATCATGCATTATAACAACCTCGTTT TCAGACAAGCTGAAGATGATTTAGAAACTTTTATAATTGAGAAGTTAAGT TCAAAGGACATGTTGAAAAGTAAATGGATGAGTTTCGTTCATTAGTATAC AGAGTGTTACAAACGTTGGGGAGTATGATCAATTCTTTCCCTCTGTAGCT TTTAGCAATTTCTTTAGACAAATcattactgaggttaagcataccaggat aatcacgacgacggacgaaaaatgtaataggctagtgaaaatacgaagtt tgattggtcgaaactcactagcctgttaaattttcgttcgtcgtcctGAT TTTgtcgatttacttaacctcactactatctaagaaataagcccaaagct gaagaaaatttgcaaacgggctttttgccaaaaagagtttacagccggta gagtttgccttcgaaactctcccgccgatttttttctgtCTACCGCCATA CCActatattttcccgcctttactatcactgtaatgGACGATAACATCAT CTACAATTTCTTATGCATGATTATTGGAACCCTGGGCAATTAAGTGAATG TTTTCGATAGCTCATAAAGTATTTCGCGGtcaattaaaacaaaagaaaag caGTTTCAAGGGATTATCAGTACTAATTTTTACGTTGGTTTTTCGGTAtt tcttttatcaatttttctttataaccGTTTTGGGTGTGACCTGGTCGGAA GGGGGCCTACTACAACATTAAAAAAGTAtctgtttatttatttgtatact ttttttctctgaatttgATGTAACTAGGTCAATATTTTCAGACAATTTTT AATAAGATACTAAGATTCGATTCTAGTTCAACCGCATCAAATTAATATTG ATGTAATTGTCATTTTTCAGCATCAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072689TCONS_00072689Clytia hemisphaericatranscript
TCONS_00072690TCONS_00072690Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072689-proteinTCONS_00072689-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_82supercontigscaffold_82:247178..251505 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.05 10.78 6.13 6.25 11.45 11.23 20.41 20.3 6.12 6.26 6.55 4.66 0.89 0.61 1.33 1.01 1.4 1.89 0.89 1.27 1.49 1.25 7.69 6.94 0.81 1.17 1.22 0.61 3.08 4.39