XLOC_045077 (gene) - C. hemisphaerica

Overview
NameXLOC_045077
Unique NameXLOC_045077
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_80:131258..141362+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045077 ID=XLOC_045077|Name=XLOC_045077|organism=Clytia hemisphaerica|type=gene|length=10105bp|location=Sequence derived from alignment at scaffold_80:131258..141362+ (Clytia hemisphaerica)
AAGGAGTTTGTTTCTTGTTAAATATACATGTCCTTCTATTATGAAACTTC
GTGATTaagtgttttattatatgttttcaatttttatttaggATCTTCCA
GGAGAAACTAacagacataaaaaataaagcaaaaattcgagaaaaaaatc
aaagctcCTGTTGATTGATGTTGTTGTTGAGTTGTCTGTGAAACTTCATA
GCAAGCTTCATCTATGTTTTATAAAGAAGCTACTTAGTATGTTTTTCAGT
TTGTTTTATGGTTCTACAACTTAGAAGACGATCTCTTCTTGGCTTTTGGA
ATGATCGCTGTAAAACCAGAGAGAGGAAATTCCATGGGGAGAAATGGTCC
AACAAATTCTTTAATAAGACTTTTATAGTACTTGTTATCATATTCTACTT
CACAAATTGCTGGAGGGAAACTCAAGCTGCCAATGTAGTCGtagatattg
aaattttgactatTCCAGATAATAAAAATTTGTCACACCTTTTTGATACT
TGTATAAAGACCGCATCAACAAACCAGACTAGCATCTCGCAATATGGTTA
TCACACTGTAGATATTATTAACGGAatgcattttgatttttgtaatgTAT
TTCATCCTGTgttttttatatcaactacAACTTTAAATAACTCAAACACA
CTCAATTTGACCATTCATTATAATCTTGACAATATTCCtcataaaataaa
tattatggttcctgaaatttttggttgtgaaagcattcaaaaactttata
aagaccCCACAAAAAAAGAGAGTGGATTAAACCTTTATGCCGACATTTTC
AATGATTACAAACAGACTTTGGATCGTCTTGATGGCTGCACGCTCCGGAA
AGATGATGGGAAGATAAACTGTTCTGATTGCAAGGTATATAATTACATTA
TTTTATGTCTGATTTGGCAGTCTGCAAGACATTTTTACAGCCTGCAGATC
ATCAACTAGCCTAGATACCCTAACTTGGTTTGCCTAAAAATTGATTGAAG
TAGTAGAAAcattgaaacaaaacaaaaacacagCTAGCACAATGACCTTT
GAAGGACGGAATAGGATGCAGTtagtccagacgatctcaatcgaacggaa
tcgactaTCGAACCAgccgaaccaaatcgaacgcaatcgaccgattgaaa
tttcattgtcgaacgcaatcgaatctcaatcaaatattaccgcaattttc
agattccaTTGATATTccattgcgttcgattgatgtttgattgcgttcga
ttgcgtttgatcgtcgattcattgaccccctgATTGTTCACCGCACAACG
GGAAATCAagagtaatttcattcggcttgtgatgtttgaaagcttggatg
ttgggaagctgcaagaataaataTTGAACAGGATGTGACCAACAATTTTG
TATTTCTCTTATATTAATGATATATTTCGAGATTTGATTCTCATCTTCAG
ATTAATATCTaaagggggggtttcaggggggtacccgattccgcaattcc
gccaattttttccccaatttccgtcaaatcgtcttaaattgaaccaaaac
tccgtcaccgaaaattcctttgaaattcaatatttttgtcgaaaattccg
caaattttgaatatcttttaccaattccaaaattccaatttttccgcact
aaaattgtctaattttccatctccgtcagagaacccaatttccgtaattc
cgtctaaattttcgccaaattccgccactccgtccgaaaaaaatgccgat
tccgctcctccgccaaccatgaaccccCCCTCCAAtagcaaaatataaaa
aacagttttaaaaacagtaaaaaatcGAAAACATGTACATCTTCGTAAAA
AAAACTTCCTCATACAACACTCGTCTCATAATAAATGTCTactgtaaaaa
ataaaataggagaaatcaaaaattgaaaaaatcagtaAAGCGTaacgaaa
taattaaaaacattttattagaaaaaggacaattaaatttttataacTAG
TGCTCAGCTTTTGTATTCATCCTTTTTGTTTAGTTCAGGTTTGAGATCTT
TAATGAATAATGCCTCAATTCTTTGCAAGAATAAAGTCaaacgatctcaa
tcgaacggaatcgtcgatcgaaccagtcgaacaacaatcgaaccaatcaa
atattacccagaattttgacgttcgattgagattcgattgcgtttgacaa
tcgaatttcaatcggtcaattgcgttcgatttggttcgactggttcgatc
gtcaatttcgttcaattgagatcgtctggagttagtggaagtacttcgAT
TTGCGAAGCGTCTTAACGTTACACACAACAAAAGAAACtaggaaaaaaca
aagaaattaccCATAGCTACcatgaagttgggtaacttgcatcagtggag
ggaaacttgcatagccatcaaatgactgaccaatcaaagcagcaaaattt
ccaaacaaatgaactacccagctccgctcgcagctctactctaccatttt
tgttttgatctaattttaatgaccaaccaggtcattcatttgagggctat
ttATGTTAgcatccactgatgcaagttacccaatctcacggtaccatttc
gcaaccatggggaatcgcAGTTTTATGGAAATGGGAATCCTCAAATCtaa
taaagcatcttctgaaaatttcattcttccccattaatgggaaaatgaaa
aatgaagaaactttcgttttataattttctttttaatctgccaagaagtg
ttataaaattgaaatgcatatcaaagattaatgctgcaaaagtgCTATAT
CATTTACTTGTCTCACAAGCAAAAAATGTgctgcaaaacttctaaaggga
ttaatgaaaaaataacccagcgctttttaatgaaattaacattttcaaaa
actatgagaagtCGCCTAAATTTGGGCCATAGGTGAAAGAATTTGaacca
agccaaccttgaaaactaatttgaatatcaacttcccaagaaaaagatct
acaggggAGACGAAagccacctagatccgcgcaccgccagataggctatt
tcccggaaattttgctggacctcaaacactgacccatttacatgtgcaga
attatttttactttagggTATAAACAATgctttaaaaatcgaagcgctgt
ctcaggaattgaataacaaaatttgattggttgatattctggctgcCTGT
TCTTAAttggtcattttgtctcattttaagttttcatgttttgattaatt
gtcttgggaacttgaacttgattcaggtaactcatccttgttgttgcaaa
tacatcctgtagatgactgatgttgttttttctgaaagctcgATTTCCTA
GTGTAACTAACTGACTTGCGTGCTGGGTATGTGTAGACAACAAGGGTCTG
TTTTTTCACTTTCCGAAGTCTCTCTAAAGGGTTataaaaaatcagaattt
tcaaAGTAATCACCCTAAGGGCTggaaaaatcatgatttttaggagtcat
tttttagttttgagaaaaaagtctCTCCAAGGGTAGAAAATTATTCGAAA
ATAGAAGAAAACTTGATTAATAAATGTCTCTCTACGGGTCACTTTTTAGT
ATACTGTTGGGAAAAGAgctatgttttttttaatactttttgaTAGACTA
TCCTATGATTCTcagaatttggaaaatttccaaaattaaagAGACACCAT
AGAACTGCAGAATGAGTTTCACATACAGTAACCATAGACCTTATTGTTAA
TCAAGATACCATTTTGACTCAAAATGTTAGCGACAAAAAGATTATGCAAT
CGATCCAAAAAGTGGCAATAGTCTGCTAAAATGGTATTGTTATCGGCAAA
AGTAATGTTATTCTAATTCCATAGAGATCCTCTTCCTATCATGATTCTAT
TGGTGAAAATCAGACCATGATTGGTCTAGAAAATATTGACTGATCAGTAA
AAAACCAACAGTCTGCAaagttgatttcttttttatcactGATAAATTTG
ACAGATCAACCTTCGAAAAGGATGTCATAGTTCGCACCCCCCCTTTATGA
AGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAG
Gggggtagcatcaaattttaaaagggggaagaacctagggtagggggggt
agctctagggtagggggggtagtgacccccttccgaactatgGATGTTTA
GCCAAATCGATCAAGCTAATTAGTCAATATGTGATACCACTTTTAAATAA
ACGGCAGATAGTAGTCTGAATTTTCCAAATCTTGTCCATTTATCCATGTC
AAGATAGTTGAGCTCCTGCTCCTGCTCCTGGACTATGTCAAGGTAGGGTG
ATGGCCAAGGGAGAATTGGGATAGGATTCAGAAGTGataattttgtcaat
atttcttAACACAAAAACGCTTTTGAAAAACGAATAAAAAAAGGCAAATT
TCGAAGTAAAAGATGTaacttttctcaaaaaaatgtatttcttttaatta
tttgttCTAGAAAGGGTATTCAGTCTATggttgaaagttttaaaatataa
CTTTGGAATTACAAACTTATCTCAGTATCATAGTCTctttttatatttca
tttttatttgatttagtACTTTCAACActtgctctccttgaggtcagatc
ccggtcagatctctgatcttcaccatattaTACATTGTATCTCTGTTGTT
TGTTAATTTTCAGCTCGGACGTATGTCCGTTTAATGTGGGACTACATACC
ACATTAAACGGACATACAACACAACATATTATGTTGTGTTGTATCCTTCT
TACTGAACTTTATATCGTTCATTGTTTTGTCTGGACAAAATCTGATAAAC
TGGAATTCCTTTCGAAAGTCTCCACAAGATTAAAACCTAGCCTGTCTGTT
GTTAATCAAGTTTAATTTTCCTcttcagtttttcaaaaaaagtctttttc
tttCATGTTTTTCTACTTATGTCtaggggttggtctaaaaagcagggtag
ccaatggggtagccaattgggctaggttattgggtacctctttttgccta
aacttttgaaatctgaaacctattttcatgtggaaataactatacaacat
cttgttaatgattccatgtaataaaatttaNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTTatgttttaattgttatttccgtgaagctgtaattcgatg
ataatagctttggaatcgcctttgggccatatgatctctaatcttgtcat
atcttaataatcctttgttattgaatctattgtttaatttatatcatgtt
tagatgtttcaaacaatcaattccttacaaaattttttaatatggcagct
tataataggtgcaaaaagtcttttgaaatagctctattataatgaagctt
tatttcttactcctcgtgcattaacacgtggtaatttatatctttgttta
tctttggaatcatacatgatcaatctaagtatcaatcagattcatgctcc
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNctattctggtctgtaaaatatttaggtaccc
cacaacctagcccaattggctaccccaattggctaccctgctttttagac
caaccctatGTCTAGTGGTTAAAAACTGGCAATCTTCGAATCGAAAAtgt
cttgttttgatttttgtcttAATATAAGACTTGCGTAACTTAACTATTGC
TCACCCAAATCCATTTTCATGTTATCCAATAAACCATTTTAACACATTTA
CCTTTTACCCTACTTTAAGGTTttgaatattcaaaaaatggtcCCAACGT
ATGAGTAGAGTAGAAACAAGAGtgataattttcaaaagttattgataaCG
AACTGGGAATTAGTGGGAGATGTTGGAGGTTCTTCTCCTGAATAACTTTA
CGTCGGTTAAAAGTAACTTAAAGGAACTTAGTAGCTTTCTTCTTAACACC
TTGTaagaaatagttttgaaaatcaattaaccctattcggcctagggggt
ttctgttcggaggtcacaGATTaatggtaatagctcctgaaataatagag
cttttgccatgaaattttctgtaaattcctaacttttatttagcttaaaa
aaataaaaatttgacacctaaaaatgtTTACACCTTGAGCATGACAATAA
GAAGTCACAAAAATTGatacttttccaatacaaatttattttttatgtca
aatgtatcatttaaaccgtaatttattgaatatttaggataaaataagca
ttttagactcaggcaacttttttctaaagcctttgttagaatacaatagc
tatttataagaacaaaggaaattttcggtttttgctcactttgggcatgc
tgagtgacgtcatcaaaaagatttttgtcaaaagttgccttatgtgacaa
ggatctcgtgtgccaaatttcatccaaaaagacccactagatcaaaagtt
aaggggtggtacaggaaaacccccctagttttgaaccgcccctaaaagcc
taggatgaatagggttaaagtggGTCATAACCCTTCTTGTTTTGATATGC
GGATAAAATGCCTTATCAAAACTTTGTAACAAATTCTTCCTGgcataaat
aaatttttgtgattCTTTGGGCTCTATATAGATCCACTTTTTAacgttct
ggtctgtaaatttaccAAGACATTCGATCGAAGAACAGTTTCATGTTATA
tatatggtcaaaatttcaagtctttAGCATTTGTAGATCATAAGAGGGAA
TGGGATCAAATGCTAGAATTCTTTCTTTCCCAAATTCACTAGATTCCATT
TGTACTTTGTTCATCCGTGACCATAACCTATTTTCTTTTCCCTATAGGAC
TCGTACAAAGAATGGATTTGTTCTCAATACGCAAGTGAAATGATGTCACA
ACGTTTCCGTAAACCTGTCTGTCCGCATCTCTTCACCAACGTTTGTCACC
ATTGTCCGGCTGTTGAACCGGATGAAGGATATGGCGGGTACTCTATTTTC
CAGTGTTTGTCTGATCAAGGTAAGAATCAAAGACTTCCCAACCTGCGCAA
GATATCCTTATTCCTTTACACATAAAATTGAGGTTTTAGCTTTGGCCAAA
GTTACATCACTTAGCGAAAATTTGATGTTATGAGatcaaacgttcgaatc
tgtaacGGTTGTCTTTACAAACAGACCGGCACCCGATATCTACTGTAATT
TCAAAATCCATTTCTGTTCAGATACTACTCTGCCATAGAGAGTACTGTCG
AGGAGATCTCTAACGTTACGCAAATTGAATATTTGCTTTCATAACGGTTG
AAATTACGTGGATTTTTTAACGAAATATGAAAAGCCTCTTTAAATAACTG
TCTTACCGATTTCCCTTGAAAGTGTTTAGtttaaaggaattatacggtgt
atatacacccgactcgtctgaaactgatgtcagcaaaattttaataaaag
agtcctttcaaatttgtaaataaaaggaggaaaaaaatcttgctccacat
ttttctttattcattacaaaagattctatttatttcaatctgctgaatca
acatcaacattataactatgtaaaaggtcaatggctttaagGGTAAAACT
AGATATCGtcattttattttctgttttttttttgggggatCGTTTACACA
TTCGAATTATCGCGTCTTAGTATATCAAAGTGTAAAGAGGACCttacaga
aaaaattgaaatcattggAATCTGCCGACAAATTAACATAAATGTCACGA
CATAAacaaatcttgagaaaatgtgTTATAACAAAGCCTGATTAGTGGAA
ATTTTATTGATATATTGCGcgcgaaaatgaaaaagaaaattcagacaAAA
GTTTTCATAGGGGAGCTGTGAGGATTTTAAGCAATTTTCTAAAGCTCTAC
TAAATTTTTTTAGCAATACGGTATGTCACGATTTAAGTCGTTactaaatt
taagaaaaatatccttttttattttttttcccaTTCCCTCAGATTCCCTT
TAGTGAAAATAATGAAGATGGATAAATTCTAAAAGTGATATATTTCGGTG
GTATCACCTTTTTCAAGCTTATAAAATACAAGTATTCTATCATATTACAC
AAATTTCTATCTACATAGTTCAGTTTTTTCTTGAGAGAGTAATTAATAAA
GAATACTTCTAattattgaagtttttcatatttttcgtTATGTTTTAGAT
GATAGCTGCAATCCATCAAATCCCGATTGTCTCTCGTTCAATTGTTTACC
GACGTACGATGAAACTAGAATTACTTATCATTGACCATGGTGCTTTGCGA
ATTCCTTAGTCCATCATGCAACAGCTCACTGCACATTAGTTCTCGCCTAA
CGCAGCTTACTATTGACAGTTATCCTTCGCGAATTCGATATCCCATCATG
CAACAGCTCACTGCACATGTCCAAATATACAATACCGAAGTTTGGCACTA
ACAGAAAGTTGAGCAAAATGTTCCGAATCATTAGTGAAACTACCTATGCC
TTATACCATACTTTTTGAATTGGTTCAATCAGTCAAAACCTCAAATGTTG
ATATACACGCCAGGAATTTTGCGAATTATTCGATGAGCACAGATTATGAA
TGAATCTCTTGGTACTTTTTGACACTTCTCTGAAGATTTTGTCTTTTGTT
ATAATGAGTGGGTATTCAGAAGACATATACATACATTGATCATTTGAATT
ATTGTTTCCAAATAATAATGGTTCATCAATGGGTTTCTTCGTCACTGATA
ACCAAAGTATTGTTGATTAATCTGTGGAGAAATTCCTCTCAACATTTGAG
TTTTCACTCAACGAGATTAAGATCTGATACCTCGTTGATATTTAAAGGAA
ATCCTTGCTTGATTTTTGATGGAATGGTTGGAAATGGATGTGTACATTTT
TGTGTGGACCATTAGCGATAGCGTGTAAATCTACGATTATTCAAACGGGT
CAAAGCTTCTTGTAGTCACTGATAGAGGGTTAGAAGTTGTTTGCTTTAGA
AAAATGCTTGcataatcttttttataagaacgcaAGGCGCCAGaacttac
tggttcttataaaaaagcgtgtagcaaAGTGAGTCAAATGTTAGGAATTC
CATTCAAACTTTATCCGTTCACACAGTAGGCCACTGTTGAAAACGGTTTA
GCAAACTTCTAGATTTTAGTAAGTAACAAATTTCAAATACAAGAGCAATA
Cgaac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072625TCONS_00072625Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072625-proteinTCONS_00072625-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_80supercontigscaffold_80:131258..141362 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.76	7.41	4.92	4.26	20	14.17	17.49	18.89	12.32	13.48	11.96	10.26	19.71	16.68	8.11	8.27	16.51	16.03	18.86	24.52	26.72	24.72	12.09	17.73	16.21	24.61	28.34	22.6	16.29	17.7