XLOC_045020 (gene) - C. hemisphaerica

Overview
NameXLOC_045020
Unique NameXLOC_045020
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_8:453465..462051+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045020 ID=XLOC_045020|Name=XLOC_045020|organism=Clytia hemisphaerica|type=gene|length=8587bp|location=Sequence derived from alignment at scaffold_8:453465..462051+ (Clytia hemisphaerica)
TTTTTATCTGTGATTAATtagcaaaaaatgaaataatattTTACAAAGAT ATTAATTGGTTTTGAAGGGCTTTTCATTGTTGTTTCTTCTCAATGAATTA AATTACAAGATGGGGACACTATCCGGTAAGTAGTTTTTAAGATTCCAATA GATAAGAAAAACTCAGGACAAAAACGAAATCTTAACCCAGAGCCTCTTGC TTGATTTCATTATTGGACGTTGGAACCTTTCGTGAACCTTAtcagaatta tcaaaaagctaACTAAAAGCTTTTACCATATGCTACCTCCTACATTTTGA GCGTGAAACTCAtaagtaaggcctaaaagcctgaaGCTATATAGTGTAGA CTTACTATATGACAGCCTCaacaaaataaagataaaacttTGAAACTCCG AAAGTTGATTTTGCCATGGATCTATATGGAGCAGATTAcgaacaacaaaa ttttcattttttgaaaatcaaaagctAACAAGAAtgaattaattttaatt tttagaattaCTATTTCGAGTATGTATCATCACAACTATGTTCACACTCT CTTTGTTGGCATCTCCTTCAACAAACACCATGGTCAAACAACGACGGTTT AAAGACGTGGTCACACATGGTCCTTGTTCACACAAAACATGCCATAGAAC TGGTGACGTCATTACTTGTTGCTATTTATCAGCATTACGCGACCTGGGGC AAGTCAAAGATGGTTATACAGTCAATTTACCAAAAACAATTCGATTACAT ATTTCGAGAATCAAAAGCACTGCATTGTGTGTTGATACTCAATCAAAAAG TAGACTCGAGATACAGAAATGTACTGGAGTTAGAATCTCAATTTTGAAGA ATACATTTTTCAAGAGAGTGGCTGGTTTAACTATTACTAAAACACAATTA GAACATATCAGTGAAGATTTCTTTGGTTTGTTTCCAAACATAAAACATTT GGTGATCGATAAGAATTCGAAGTTGAAACAGATTCCAGCTATCAATAAAT TCCCAAAGATGAGGCTACAGACTATAAGCTATATAGGGAATATCAAAGTC CAATTAGTTAATTGGTTGCCAGATTCACCTTTACCGCTATTACGTGAATT CTTATTCAGTAATTTCCTGGAAAAAGCAAACGACCCAATTACTGACTTCT ATATGAGCCCATTTACACCGGGAAAGAAATTCAAAGCTTTCAAAGTCCGT TTAAACTACCAAAATGCGCATGTTTCAATGCCGATGATGGATGGAGAATC GAAATTAGGTCAACTATATGTTGGTTCAACTAATATCCCCGATAATTTGA AGCTGAACTATACCGGGTTTAACGCAAAGGTCAAGGACGCCATCTTTAAT TTCCCGGTTAAACCCGATACAATTGTTCCGGATTTTCTCCCATCAGATTT CGAATCCCGATTCGGAAAAGTCAATATCCGATTTGATGGCGAGAGTTACG AGTTAAAGAATTTGGAATTCCAACGTAAGATTTCTAAAGATCGTGTTATG AGAGTGAACAACTCGGACGAAGAAAAAGCTTTAATGGAAATTAAGCGAGA TTACGGGACaccgaaatcgaaagtggattATAAAGGACGATACATCTTCA AATACTTCATTTTGGATAGTGACGATTTGGTCAAATTGGTGCGAGATTCA CACAACCTCGGTAAAAAGTACATCGTTAAAACACACTTTCTGTGGATTAA GAACGTCAATTATTTACGGAAATCTGTTAAACTCCATTTGACTTTTTATT CACTGGTTATGAGTAAAAATGGAATTTTATGGTCAGCTGATGCCAAAGCT AATAGAAGGAAACATATATTGAAAAATAAGGATTTCAACATTGCTAAATC TGTGACTGTGTTATGGCGGCAATTTGATTTGCAGAATTTTTATGATTATT TGACAACGGCTGCTTCCTTGGCAGAGTTGATTCATTGGGGCGATGATTTT TCGAGTAAAAATGAAACTTCGACATGTGATGCATTGAAGATGAAGATATC ACGTGATATGTTCGAAGCAGCCAATGAAAGAGACGTACTGACGTTAgcat ctttgtcttttctatcgTCCAATCAAATCGCGTTGGTTGAGAATGCAATG ACGTCATTACCGAGATTATATGATTATTCGAATCGGTTGAttgggaaaac gaaagtaatacaaccgatgacgtcatcattcgaTGAGCGGACGCTATTGT ACCAAGAGTTAACAAAAGCGTTAATTCAGagtgaaaaatatgaaataaga aagaaaagagtCTCATATGGTATACAAACTTTAACCGAAACTTTGAAACT TCGTATTGATATTCTGAAAGGGACACTTGAAAATGAAATGCAAAAATACT TGATTGAGGAAAAAGAATCACGGTACTTGCTccagaaaattcagaaaata cGAAAACATTATTTAATAGATATGGAACCCGTTAAGAAACGATTCTTAGA CGCGTTGAGTATGGAAGGGCTACGAGGTAAATATAACCAGATCAACGAGG GTATACAAAAACTATTCTCAAAACTTTACGgtaaagaaaatcaaatcatT TATCGACGCAAACATATTCCAAGACCCAAATTATTATCCAATTTAGATTC CGCCATTGAAAGTGTCTACAATTTcacgcaaaaattaaaaatcatacagg gcgccgtatcagatatttatcaagcaaaattggACAAAACGGTATCAACA GATTCAACTAAACTAACGTCGCCGACCATAGACGCGAGCGCATATTTCCG CTTGAGGCTAACTCTACTCTCAAAGGATACAGAAATAACGAATCAAGATG CATTTAATATTTTGTCacaatttgatgacgtcacaccTGATGATGTATtc aaatatgacgtcatcatgcAAAGTTTAGATCAACTTTTGGATAGAGATTT GTCGGATCAAACTCCAGAAACACTAGCCTTCAAGACATCTTTGTTGAGGC TTTTAGATGTAACTAAAGTGGAAAGTGAAATACTGTATGATGTCACAAGA GCTCAAGTGGATTTACTAGTTGGTAAGTTGGATGTAAATATCCACAACtt tctgatgttttttttatggaaacagccaggtttttgccagtattagcaaa tttttaacaatttttctcTAACTTAAATTTGCCACAAGGCACACATTACg ccatgaatatcatgaattgatatCTGAAGCACTTCACTTCCGTACTGTCA GTGTTGAGTTTTCGGTCATTTCAAGACTCAATATGATAAAGGGTCCGGGG ACGGATTTTTATCTTATAAAGTCTCTAAAATTCTTTCGTCTCACGATGTT TGTCTGAGGATTGCAGCAATACATCCTTGCACCGTGTATCCcaagcttta tttacgttaATGATGGACGCTACCGGTAACCATGGAAAAATTGTTTATCA GCTAGGAACATGGTTGACTGACATACGACGCTGTCTCAACCATCATAACA TCCATTTTTAATATTCTGCCAGCCGAGTAGCCTTTTTCAAATGATTCTAC CTTTAAAgatcatttttaaagaaattcaagattttaCAGGAACTGAAACT CGTCCTTTCATTTTGTTTCAGGAAATTATACTTTGAATGCTTATCAACGC CAACAAGAGCATCTCGTCAAACGATTGGACCATATGGAACAAAACAAAGC ACGTGATCAACAATCAACCAATCAGGatggagaaaataaaaaatcagccA ATCAAAATCAAGAAGAGGAGGAAGATAAAACCGAGCAATTCCACGATCTA CGTCAATCATTGATCGATCAACTGAAACTCGACATGCTTCTACATATTAA TCAATATTGCACTTTATATGAATATAACACCTTACAGCAATGCTTAATGA GGAAACAATTTTCTTTAGACGCCTCATTGCCTAACTTGTTGCATTTGTCG AATGAACTACTTGTGGTTTCTCGAGACATGCGCAGTAGAGATGACAATGA CGGAACGCAATCGTTTAATGACATTCCAATACGTTATGAATATAATGAGA AATGCAATGATATCTTACAACAGGTAAAACAATTTCATATTCATCTCTAG AAGCCtctgagatgaaattttgctaGAGCGATCTTTCTTTAAAGGACACC ATTTAATCcatctcctaccatttgcttataTAGCAttattgaacaaaaaa agagAACAACTTCCTCCCCTTTCGGCGCCGCATAAACACTGAAGCTTCTT TCTCATTGAAAATCCTTTCTCATTGAAAGATACTTTGTTATGTTCGTTCA TTTGAGCTGTACTCAATTTTACAAGTTCCGTGGATCTAATAAAGTTATGT CATTCGATTTGTTTTGTTTCACCTTTTCATAGGCGACCGACGCAAGATTC AACACTTTCCAACCCTCCGCACAACCACTTGAGCCATCGCCACAACAACC GCAATACATGGCCAGTCAAAACATTCAACAACAAAGTCCAGTTGTCAAAG ATACACAACCAACAATGAAAACATTACACCCTCATCATCACCACCGGCGA CACCACAAACACCAAAAGCGGCACCATAGTACAACAAGGGCGTCCGCCCA TTCTGCTATTTCAACCAACGGAGAGGATCCGATTAACGCCCCTAGTGTGG AAATCAAAAGTATGACCAACTCGAATACTGTTAAATTCAAAGATGTGTCT AACGACGAAACTAAAGGAATTAAGGATCTAATTGAAAGCACAAATACGGG AACAAAAAACGAAGTTGGTAACCCAGATAAAGTCTTAAAATCACGGAATT CATCTAAATCTGACCCTTTCCCGTCGTTAACACCTACTGCAGAACAGCCT ATTGCGATTTCAAAATTCTTGGATACGACCcatttgaattcttttgtttc caTGGCTGAGAGTAACGCAACTAAAAAGACCTTTGGGAAAGATGAAGACA AGGACGAAAGGCTAACTGAAAAAAAGAATAGCCTGGATACACATACAATT GATTTACCTACAAATTCTTCATCGTCGACGAATATTATTGATGAGGATAG TGATGCTACAAATCCAACTGTTACGTCCAAAAACGCATCCTTAGAAGAAA GGCAAAGTGATGAAGTCACCAACCTTAGTGTGGAGAAAGTTAGAtcaaca tcaaaaaagaaaaccttgCAATCAGAAACGGCTGGAGACCAGAGTACGGG AGAAGCTAACCAAAGTAAACGTAAGGAATCTGGTCACGGAGACAGTTTAT CGGTAAAGAAAGCTAATAACAAGAGGACATCGAGGAATAAAGAATCGAGG CATAAAGAAGTTGAAGGTTCTGGTGATCAAgaatatgctgacgtcatcga gTCAAGTCCAACAATGACGACAACACAGAAATCATCATTGAAACATGCTG AAGTTCAAGGACCAGATGATTTTGAGAACGAAGTCGAGACACTGTTAAAA GCGACATCCCCGGAAAGTCAAAACGAGACATTGAATCATTCTACAAGTGT AGAAAATCAAACTTTGGCTGTTGCAGAAGGACAAGCTAACGTGACCGAAA ATCTGATTAGAAACACAACTCCAGCTGCTGTCAGTGGcaataaaaaatcc agcattaTTGACGATAGCCTGACGTATGACGTTATGGAGGGTACTGACGT TTTAGCGTCGTCTGATGAATCAAAACCGGCCCCAAAGGTGCCAGCCAAGG AGTCTGAAGATTTGCTAGGATCGTGGATCGATGAAGGATTAGGTTTGAAG AATCATGATCATACCTTGACCGGCTCTAAGAGAAGTCATTTCGCAGGTAA TCATAAAAATAAGCCGGTCCGGACTTTAGGTGGACACCGGGTACGACGGA AAACTACGGAATCAGCCTTTTCCGTGTCACAACAACAAGAATTACCGTAC GATTATCAGAATTTGAATATAAAGAGAAGTTTTATCAACCCTTACTCCCA GGCGACGTCGCTTTATGGCTatcaaaataagatttttaaacGAAGCTTAA CGCCGACGGAACATTTCGAAAGTATGTACCGCAAATGTAAcgcatccaaa atatttgaattgcGTNCATATTTCGAAAGTATGTACCGCAAATGTAATGC AtcaaaaatattcgaattacgtcaaaacaaaatggcatcCCTAACCATCT CAACAAATAATAAACAATTTCGAGGATTCGAGAAAATTAGAATCGATGAA ATTAAGGTCTATTTACACGGCGTGAAAACGGATAATGGTATGGTGCAAGT TAAGATAAGAAGCGGCAGCTTCATGCACGATAAATCGAGCGGACAAAAGC GAAATTTTATCTCCCAACGCTGGGAAAGAGACTTTAAATATAACATCGAT GAAGTAGCTACTAACAAAGATAAAGGAGTCTCAATATCTCATATCAGTGG TGATTCTTACAACAAAAAAGTGTTTGGGAGTCATCCAACCCCATTTAACA CGTGGATCATTTCCATATCCAGTGAAATGAACCCAGGTTTAGATCTCTCC AATTTGTCATCTATTGAACTGTTATTCTCAGGTAGCCTGGTGCCTAGTGT CCCACGCGTTATACAAAAGGAGCAAAGTTATTTCGAACTTTTAAAAGCAA AAGGCGTGGCGCCCACGAAACCGCCCAAAACACCGACAAAGAAACCAACA CAGGGAAGACAAAAGTTGAACAACACAATGCTTGAAACCACTCCACCAgc aaaaaagatgaaaatcgtAACCAAAATCCATAAGCATAAGAAGAAAAGAC GTACGAGATataataaaaaaggaaaaacacaacaaaatcATCACAAATAT TTTGCAATGCGAAACACTACAGATAACGTTATAGAAAGTACTTTGAATTC TTTCAAGAAAGATGtcgagaaaattcaaaatttgacaGCAGAAAAAGAGA CTGGGACGGGCCACGCGGGAAGCCCGACTGAACCATTAGATGGATTTAAG AAAGAGGAGAAAAAACCGATTATAACGTGGTTTGGTTAAGATAGGAACCA GCTTTTCGTGCGATAATGGGAAATCAGCGAGATATGTTTTCTTCATAATC AACAACTTTGAGATGTGTTTTCCGATTATTTTAAAACCCAGTATGTTAAA AGATTTCGACATAGGTGGAGGAATCAGGTAACTGCTAACCTAAAGCAAAT TAATTGTACACGAGGCTTTTTATAGAGAATttagtatttaaaaaaatgga ttttccctataaatacaaaaaaaaaattaaaaatccttTCAAAATGATAT CGCTCAATTTTTATTAAAGTCAGATCCAAGATACTTTGTTCGAAGGCAAG GATCCTGGGGGACTAAGGTAAATAGGTGGTATTAGTTATGTACGAGCATC CATCAATAAGGgtaaaaaaacacaaatcacAAAAtgatatacagttgacg ctctcttattcgatttccaaggggaataggattttcatcgaataagggag catatcaaatagtagaacgtcgtttatgagggtttcttgttgacggggac tttcaatattatcaaataatagagcgtatcgaataatagagcgtatcgaa tagtagaacgtcgaattagagagtgtcaactgtaatcTTACAGGAAATTT GGACCAAGATTTGTTGAAAATCTTCAGCCCTTCTGTGAGTCCCGAAAACC CCAAAAACAACTACTTTTTAAGGGTCGATACTTTGTTTTGATATAGTACC CCCAGATGAGGAATtagaaaaagttgtttttacattaCAAGGGTCTACCG CGAGCTGAAGTACGAAGAGGTGTAATTGAGTAGTTACAGAGAGAATCAAG CTATTTATTTGGTGTTGCATATTACCATTGAGTTATAAAGCCCAAACGGC AAGAGAGGAATTTCTTGGTtgagaaatgaagccacttatttcgcATCTAA ATTGCGAGTTTTCAGACAGTCCCGGGTGAAAAGATTACGAGAACTGTGCC ACACTAAAAAAGAACGCACTACAATCGGCACCGAAATATTTAGCACAAAA GTGGAATTCCCTCAAaagtaaaactttaaaaccgaAAGTGATTATTATgt gctttaaagtacggttaAAAAGTAGACTTTGAACCTTNGAAGTGATtatt aagtgctttaaagtacggttaGAAAGTAGACTTtgaaccttaggatctca ggatctaaaagctgaAAATGTTACAATATATATGGCTGAGAACATAGCCT GGTAGCCACTTAATCCCTCTCTAATCGAAAAATCCCctgaaacaaagtgg aagtactgaaattgcGATTCTCAaccgagctttaaattctgaaaaacgtt aaaatataaaaattgccaatatatttcggcactGATTGTCGATGCAATTC ATTGAGGTTCACTTTTTCATGCTTTTAAAAGATTCCTCTCCAACCCTCAT GCTTTAAACTCACAAAGCACATTACGAATGGAAGTTTGCGTTATAAAGCT TAATTTCGTTAAAAAGTTAGACAATTAAATTAATCGCACCACAttttaat tgaaattgaaatcatACGGTTGAAACCTCTTCCGAAACGCTTTTGCTTGG CTGACTTCTTCTTCTCGATTTAGTTTACAACTTTTCCAATCTACGCGGTC AGTCATGTCAAGAACATTCTCCCCGGCAAGTACTTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072547TCONS_00072547Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072547-proteinTCONS_00072547-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:453465..462051 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.02 0.02 0.02 0.18 0.05 1.58 1.87 0.14 0.16 1.07 0.72 1.32 1.18 0.78 2.73 1.26 1.15 0.01 0.04 0.9 0.72 0.37 0.39 0.91 1.03 0.24 0.08 0.01 0.02