XLOC_045005 (gene) - C. hemisphaerica

Overview
NameXLOC_045005
Unique NameXLOC_045005
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_79:40531..46385+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_045005 ID=XLOC_045005|Name=XLOC_045005|organism=Clytia hemisphaerica|type=gene|length=5855bp|location=Sequence derived from alignment at scaffold_79:40531..46385+ (Clytia hemisphaerica)
ataaaacaacaacaacaacaaacagcaAAATGAAGATTTGGAAAGCTTTG
TTACTCGTCTCCTTCTTGGTCTACGCAGTTCATTGTAAGTTCAATTATGC
TCAACACCTTTTCTTATTCATAAGAGTCttataattttcattcttttgcT
GGACTTCAGATGCTCAACATCTTTTCTACACCTTTATTCATCATGAGTCT
TTTAATTTGGGAGTCTTGTAGACTTGCTTGCCATCAGCTTTTGCTGGACT
TCAGAACAGAAAGAAGCAAAAAGATTGCAAGAAAtaaacgatcgaacatt
ttctttaaattctaggcgaagAAGAGGAGACAAAAGCCTTGGATGAAGTC
GAACAAGAAGACGCTCCAGAAGCCTCCCCACAACAAGAAGACGACGAGCC
AATGACCAGTGACGAAGAAACGAATGACGACGAACAAACGAATGACGAAG
AGGGAGAGGAGACTCATGAAGAAGAAGAGCAGGATGAACCACAAGAACAA
GAAGACGAAGAAGAACAAGATGAAGAAAATGTCGAAGAACAAAGTGGTAC
GTATTCAACAGAAATGCTAAATGTGAAATTCTCTCTCGAAAGAAGCGTTG
CAATCACGGATAAATATCTAGAATCTAAGAATCAAGCTAAAGACATATTG
TTTCTTTGATCAATNCAACAAAGTGGTACGTATTCAACAGAAATGCTAAA
TGTGAAATTCTCTCTCGAAATAAGCGTTGCAATCACGGATGAATATTTAG
AATCTAAGAATCTAAAAATCAAGCTAAAGACATTGTTTCTTTGATTAATT
ATGAGAAAATTGATTCCAAAGGAGATGACATCATTCACAATCTTTCCTTC
CTataactttttcttctttttttcagatgCTTACAGACCAAAAGTGAGAA
TCACTAAAGTGTTCAAAGGAAAAGGACTCttcaaaaacaagaaagttAGC
TGTGCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
CCATTAATGAACCAAAGGAAATCCACTATGGACATTGTTGTCAACTGCAC
TAAGGAATGACTCCCTGCTATAATAAACGAAAGATTAATTGTTTTTGGTA
GATACTGACTCTATGAGTGCATTTTTTCGTCGAAAATAAGGCCCTTAAAG
ATGATATCTTACTCTTCGAAAATGATTATTTTCCTCAATATCAATTatac
aattttttgaattattccGACCACGGGATGGTTGGCCTAACATAAAATAG
TGAACATGACATGGTGTTGTCGTGGCTACAATAAGGAATGACTTTACATT
TTGTAAAAggtgaatttaaaaaattacaaatagtCTTCTTTGCCTTCTGT
ACTACGAAGAAAAGTTAGTACACTGGTACTAAAAATAGAGAATTTTATCA
TTTCTTGAATCTTTTTCAGAATGTTTCATTAatccaaaaaactttaaaat
taaaaaaaaagttccgCATTATTTTGCATTTAGTTAGCATCGCAAAAAAG
TGTCAATGAAAAACATGAACTTCatattgaaaaaattaacaCTTGAGAAA
ATTGGTTCCGAGCTTGAAAAGACCGAAACACGGTGGTCTCTGTGTCAAAA
TGTCCGTAAAAACTAAAGTACATGTTAACTCAAATAACCCTTCTCCAAAC
TAACCTTCTCTTTATTGGTACTCGTGTATGTCTGAGAATTTAATAACAAC
CCCTCCGAATACCATACCTCTCAAAAGTTGCAAGACAACCTAATCCAATT
AGGCAAAAGGCTGTTATTAAACTCAACTTATAAAGGGCTAGAGAGaagtc
aatttaaaaaaaagaagacgacATGGCAGTATATCTAAAATTCCATACAG
TAAGTATTGATTGACAGGAGATAAATGAAAAACTTAAACCATTGAAAACT
GTCCACGGGTAACAAGAGAGATGACTATCAACTTCCGCCTCGTTTTTATA
TGCAGAGTTTGACGAAGGCAATTAAAAAAGCGGTCTCGTTATAAAACCAA
TAAATTCTAgcattgtttttaaagaaattgcAAGTCATCCTGAAAAAAGA
GTGTGAGGCTCGGTAACAATGTTATCTTAACAAGGggaaagtttgaaaag
aaagacttATCAAGAAAGCATGTCAAACTCGGATGGGGGTACTAGGCTag
aaatatttgtcaaaattctGGGCGATCAATCTAAAAATTGggtcaacatt
ttcaaaaaacgtGACCCTTTGAGTTTATGGACTTTTaagttatgaaaaaa
acttcattttacTTCCACgtgaatttcataaaaataattgACTTGACTGC
ATACTTAGCCCACTTGTTGACCTTCTCACGCCATCTCAGTCACGTGCGTG
GCTGCCGTTGCAATGAGAAGCTGGTGTCTTCACTAGTGATATCTTTCCAT
CGTTTCGCCCGTCTACCTCTCCTCCTTATGCCCTAGAACtcacttttcaa
acattttcttaaaaggttctCCTCTGGGAATCTCACAACATGGCCGAACT
ATGACAATCACCTTTTCTTAATGACACGGGCAGTCGTTGTTTGAAGTTTT
GTTCTATTCAGAAATTGaatcaatgataaaaaattGACACACATCCTCAA
ATTTCTGAGCATAAGCTTATCAACCTGATAATGGTTAAAGAGAAATAGCG
ATAACAGCAAAATGGATGATTCATCGATTCAGTCTTAATCTGAGAAAAGG
CTgccaaaagttttttaaaagtctTCGTGACACACCCTTTTCAAAGCGAA
AAAAGCTGAATGTATCAAGTTTGATTGATTAATAATATGTAAAACCATTA
TCATCATTCGTGCTTCAAAAAAATACTGCATGTGAAGAAAATTAATTAAG
TAAAACCAAAACGACCATAATTAATAGCCGATAAAGTTTGGCTGAAAGTT
TCGGAGTAATTATCTTCCTCTCTCACTTCCTGGTCTGCAACAGTATAAAA
GAGCTGCAACATTTGGAAAAAGACATTCTCAAATTGAACTCGAGGataaa
acaaacaacaaacaaacaacaaaatgaagATTTGGAAAGCTTTGTTACTC
GTCTCCTTCTTGGTCTACGCAGTTCACTGTAAGTTCAATTATGCTCAACA
TCTTTTCTTATTCATAAGagtcttttaatttttattcttttgctggactt
cagaacagaaagaagcaaaaaaatcgCAAGAAATAAACgatcgaaaattt
tcttttaattctaGGCGAAGAAGAGGAGACAAAAGCCTTGGATGAAGTCG
AACAAGAAGACGCTCCAGAAGCCTCCCCACACCAACAAGAAGACGAGCCA
ATGACCAGTGACGAAGAAACGAATGACGAAGAAATGAACGACGAAGAAGA
GAGTGACGAAGAGGGAGAGGAGACTCATGAAGAAGAAGAGCAGGATGAAC
CACAAGAGCAAGAAGACGAAGAAGAACAAGATGAAGAAAATATCGAACAA
CAAAGTGGTACGTATTCAACAGAAATGCTAAATGTGAAATTCTCTCTCGA
AAGAAGCGTTGCAATCACGGATGAATATCTAGAATCTAAGAATCTNTGCA
AGAAATAACCGatcgaaaattttctttatattcTAGGCGAAGAAGAGGAG
GCAAAAGCCTTGGATGAAGTCGAACAAGAAGACGCTCCAGAAGCCTCCCC
ACAACAAGAAGACGAGCCAATGACCAGTGACGAAGAAGAGAGTGACGAAG
AAACAGATGACGAAGAAGAGAGTGACGAAGAGGGAGAGGAGACTCATGAA
GAAGAAGAGCAGGATGAACCACAAGAACAAGAAGACGAAGAAGAACAAGA
TGAAGAAAATGTCGAAGAACAAAGTGGTACGTATTCAACAGAAATGCTAA
ATGTGAAATTCTCTCTCGAAAGAAGCGTTGCAATCACGGATGAATATCTA
GAATCTGAGAATCTAAAAATCAAGCTAAAGACATTGTTTCTTTGATCAAT
TATGAGAAAATTGATTCCAAAGGAGATGACATCATTCACAATCTTTCCTT
CCTataactttttcttctttttttcagatgCTTACAGACCAAAAGTGAGA
ATCACTAAAGTGTTCAAAGGAAAAGGACTCttcaaaaacaagaaagttAG
CTGTGCAAGCTCCCTTGTTAACCTCGGATGTAAATCATCAAAGAAATGCA
TCAGAAGAAGGAGATACTACAAAAAACGAGTTTGCGTCAGATCTCTCATC
ACCACAGTTTGCCGACAACGTATCACCGTAACATGCAAAGTATGCAGCCG
ATTCCGACTCCGAAAATGTTATCTCTTCGGAAAGAAATACCTCAGATGCC
GAACATCCAAGAGAGTCTACAACAAATGCAGAAAAACCTCCAGCTCGAAA
ATCCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072523TCONS_00072523Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072523-proteinTCONS_00072523-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_79supercontigscaffold_79:40531..46385 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16	0.08	0.82	0.27	1.08	1.08	1.96	1.35	2.89	4.8	1.22	0.53	1150.01	1109.9	521.33	778.41	34.95	77.48	10.35	27.82	0	0.11	0.18	0	0	0	0.11	0	0	0