XLOC_044988 (gene) - C. hemisphaerica

Overview
NameXLOC_044988
Unique NameXLOC_044988
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_78:42472..51623-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044988 ID=XLOC_044988|Name=XLOC_044988|organism=Clytia hemisphaerica|type=gene|length=9152bp|location=Sequence derived from alignment at scaffold_78:42472..51623- (Clytia hemisphaerica)
ATAAACCTAGGAAAGTCCACAACAAAAGATGGCTGCAGTCAGTTTGAAAC ATAATCCAGGATGATTTAACTTAATTGTTGGTGTGCTTTTTATGAGTATG TAAACAATGGAAAATTAATTGGAAATGTCATTATTAATCATAATGCATGC TTCTCATTAATCACTTTTGAAACATTTTCGTTTTTTTTAGATTGTTAGAG AAACAATTTTTAAAAACACACAAGGATGGTGATGGCTGTTGGAGTAAGAA AGAAATATATTGATGAGAAAGACCTTGTTTGTTATTTTCTGTGAAATTTC TCATCTTTTTTGCGAGAGTTCAGTTGAAAAACCATGGAAGTACCAGGTAT ATTAACTGACTTAATTTTCTTTTTAAGATTCATTTTGATAAATTTAAAGG TTTTGTTTTTAAATAAGAGTGATATCGTTTGCTTACTCATCAATTTTGAT TCACAAGCTCATATTGAATTGACATAAGTGTGGAGCAAGATTGGTCAGAA AGAGGAAAAGAATAACATTTTTTGCTTATATCAGCATAATTATAACAATA GGCAGACACTGTCTGATATGATACTTATGTAAAAATAAAACCTTTGATAC ACGTTTTTTTGTAAGAACAAACTATTTAAGAACAAGTTGAGAACATTTTA GGATTTGTGGACTCAAAACACCCGAATTCTTTGGAAAATGGTCAAAAATG CTCAAGAAATTGTGAAAATAAGAATATGTTAATAACATTTTTTGGCTTAA AACTAAAGTTAAGAACATCCAAAGGCTTCAAAATTATGTTCGTATAAAAA AGTGTATTAAAATGTATTGGTTAAAATGTATTGGTTAAAATCATTATTTT TAAGGTTATTTCTGATTTTGAGGCCCACTTTTTAAATGACGTCATCATTT TTTCCTGGAAATTTGTGTCATGATGGAACATCTGTACCAAATTTCATGGC CATAGCTCTTCTAGATCAAAAATAATCGAGGGTGGTAAATTCTAACCCCT TGGGGATATAAAAATAAAAAAAGCTTTGGGTTTTGTCTAGTATGTAGGAG GAAGTCTACACACATAATGGCTGGAATGAATTTTCTCACACTTTGAAACA ATTTGGGGGAAAAACATCAAAAGGTCTAAACAACAACCATCTAAAACTTA AGGGAATATAGGGGAGATAGGCGGGCCCTCGAAGCGTCTTAATTAAACAC TCAAGTATAGGAATTATTGCTGTAAAAAGGCAACTTTCTTCATTTAGAAG CTCGACAAAAGAGCTAAAATGTTGTTAAAAAAGATCTAAAAAAAAAATAA TTTCTAGTTTTCGTGTGTTGATATTAACGAACAGTTATCTAAAGAAAGTT GTTTTTACATCTTTCCCACGCCTTTTTAACAGATATTTGATGAAACAGTC AAATGTGTAATAATAAGTTGCACGTTTTGAGAAAAGCTTGTAAGAATTCG AGAAAAATTTGAAATGAAGTGTGTTATTTCTTCCGCCATGAATCTGAACA TATATGATCTGAACTTGAATGAAATTTAAGCCTTAAAAAATTTTAAAACA AGCAGCCAAGCAAACTATAAGATTTAAAAGTCCATAAGAATGAAACTTTT TCAGTTTTAATAGAAAACTGATTAAAATATTTCCACAGAAAATTAGAAAA CCAGCAAAAACAACGAGTGGTTATTATAAAATATCTTCAAAACCTTTGCC AATTTTTGCCTAAAGTCTCATTAACAAAAAAGTCGATGTAACCAATATGA AACCTTCCCTTTTTAGCGAATAGCTAGTTTATGTGTTTTTCTGCGACGGA GATGATCAGCTTCTTCTTTGTCTAGATCCTGATCGACTAAAAACGACGTA ACTCAAAACGGGACAAAACTGCGGGTTGTTCCAAATGGCTTCAGCCACTT ACTGTCCTCAAAAGTGCAAATAAATAAGCTCGCTAATACAAGACATAATA AGATAAACGACATAAAAATAGGTTTGACAAAGCTTTTAACAAAAAAACAG AATATAAAAATATTTTTGAAGAAACATCTTTTACTTCGAAGGAATCACCA AAATCAATATGTAAAATCTTTCCAGACATTCGATCCAACATCAAATTCGA AGGATGCCTGATAAAAATAAAAGAAGAGTAAGATAGGAGTGATGGTTGAG AGGTCGCTAGCGTCAGGGTTTAACGTTTGGGATTCCCACTCTTCCTAGAC TGTAGGACGAAGACGATACAACCCTGATTTTATTTGGGAATTGCGCGTAT TATTTCGATTTTGACACGGTGGATTCTTCTCAACTCGAACACGCACGAGG AACACAAATTTTGACTTACGTATTAAGGACTATAAGGCATTTGTTAACTG AAAGGACTAAAGAAAACTTCGTTCGAGTTAAAGATACATCCGAATTATAA AGTTTCGAATTATGAAAACTCTACTGTATGTAGTAATGGGAGTCAAATTT GTAATAAAATTGTGCTACTTACCTGTCACCCAATCCAAGAACGTAACCCA CCATTGACATCACAGCGAGCGACCGCGTGTAATTCAAACGGCGGTCATAC CAAACCTATTGAAAGGTTATATATTGAAATTAAAAAAAAACATAATTACA GATCGAAAAGAGTTTCGAAAACTACAGTTGACGCTCTCTAATTCGATCTT CAAGGGGAATTGGATTTCTATCGAATAAAGGAGCCTATTAAATAATAGAA CGCCGAATTAGAGAACGTCAACTGTAATTCAATCAAACACGACTGTTTTC CGAAACTAAAGCTTTTATGGAATCAGTAAATAATTACCTTATCGGGGAAA ACTTTTGGCCAAGCGACGATTATTTTTCCCCGACGAAAATTTTCCCCGGC CTTAATGCGTTTACCAACTACCAGCAAGTGACGAATACTTTTCCCCGACG AAAGTTTTTCCCAACGAAAATTTTCCCCGACGAAGTTTTCCCGATAATTA TCACTCAATCACTGTTAGAACAATCAACTTACCTCAGAACTGGGACTCTT CAGCCAGTGAACTTTGGCCAAATCGTAACCCTGTGTTGTGTTCAAAGCAT GTTCGAAAACATGTTTGACACAATTTAAACTAAAAAAAGCTAATGCTATA AGAGCTGTCCTCAATAAAAAGTGAGTGAAGATAAGATTTTGGCAGTAGCA TTTTCCAAATCAATACGTTTGAAATATGCCATTGGTGGCAAGGGTTTCAG TAGCTTTTCTATTTAGATCTCAAACTTNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNTTTCAGTCCCACTAAGGGTCGGAAAAATAGGAAAATTTCAACT TTTTACCCCCTGAAAGATCAAAATTTGGTCAAAATTGGTCAAATTTGTTC CGCTAAGGGTCGTAAAATTCTCAAATTTTTTCTTTGTTTTCTCCTTTTTA GTCCCGGTAAGGGTCCAAGGTTCGAAAGTCGGGCGGCATCCCCCGTCAGC TCGCAACCCTAGTACCCCCCGGAGGTTCCTTTCAGTCACTCCGCCATCCT CAAAAGCTGAAATACAAAAATATTATAAGGAGCGCTAACTATCACTAACT AGCGTTAAATAAAATTGGGTTTTGACGAAAGAATGNACAACAACCATCTA AAACTTAAGGGAATATAGGGGAGATAGGCGGGCCCTCGAAGCGTCTTAAT TAAACACTCAAGTATAGGAATTATTGCTCTAAAAAGGCAACTTTCTTCAT TTAGAAGCTCGACAAAAGAGCTAAAATGTTGTTAAAAAGATTTAAAAAAA AAGTTATTTCTAGTTTTCGTGTGTTGATATTAACGATCAGTTATCTAAAG AAAGTTGTTTTTACATCTTTCCCACGCCTTTTTAACAGATATTTGATGAA ACAGTCAAATGTGTAATAATAAGTTGCACGTTTCGAGAAACGCTTGTAAG AATTCGAGAAAAATTTGAAATGAAGTGTGTCATTTCTTCCGCTATGAATC TGAACATATATGATCTTAACTTGAATGAAATTTAAATCTTTAAGATTTAA AAGTCCACGAGGGTAATAAACTATGAAGGGATAAGAATGAAACTTTTTCA GTTTTAATAGAAAACTGATTAAAATATTTCCACAGAAAATTAGAAAACCA GCAAAAACAACGAGTGGTTATTATAAAATATCTTCAAAACCTTTGCCAAT TTTTGCCTAAAGTCTCATTAACAAAAAAGTCGATGTAACCAATATGAAAC CTTCCCTTTTTAGCGAATAGCTAGTTTATGTGTTTTTCTGCGACGGAGAT GATCAGCTTCTTCTTTGTCTAGATCCTGATCGACTAAAAACGACGTAACT CAAAACGGGACAAAACTGCGGGTTGTTCCAAATGGCTTCAGCCACTTACT GTCCTCAAAAGTGCAAATAAATAAGCTCGCTAATACAAGACATAATAAGA TAAACGACATAAAAATAGGTTTGACAAAGCTTTTAACAAAAAAACAGAAT ATAAAAATATTTTTGAAGAAACATCTTTTACTTCGAAGGAATCACCAAAA TCAATATGTAAAATCTTTCCAGACATTCGATCCAACATCAAATTCGAAGG ATGCCTGATAAAAATAAAAGAAGAGTAAGATAGGAGTGATGGTTGAGAGG TCGCTAGCGTCAGGGTTTAACGTTTGGGATTCCCACTCTTCCTAGACTGT AGGACGAAGACGATACAACCCTGATTTTATTTGGGAATTGCGCGTATTAT TTCGATTTTGACACGGTGGATTCTTCTCAACTCGAACACGCACGAGGAAC ACAAATTTTGACTTACGTATTAAGGACTATAAGGCATTTGTTAACTGAAA GGACTAAAGAAAACTTCGTTCGAGTTAAAGATACATCCGAATTATAAAGT TTCGAATTATGAAAACTCTACTGTATGTAGTAATGGGAGTCAAATTTGTA ATAAAATTGTGCTACTTACCTGTCACCCAATCCAAGAACGTAACCCACCA TTGACATCACAGCGAGCGACCGCGTGTAATTCAAACGGCGGTCATACCAA ACCTATTGAAAGGTTATATATTGAAATTAAAAAAAAACATAATTACAGAT CGAAAAGAGTTTCGAAAACTACAGTTGACGCTCTCTAATTCGATCTTCAA GGGGAATTGGATTTCTATCGAATAAAGGAGCCTATTAAATAATAGAACGC CGAATTAGAGAACGTCAACTGTAATTCAATCAAACACGACTGTTTTCCGA AACTAAAGCTTTTATGGAATCAGTAAATAATTACCTTATCGGGGAAAACT TTTGGCCAAGCGACGATTATTTTTCCCCGACGAAAATTTTCCCCGGCCTT AATGCGTTTACCAACTACCAGCAAGTGACGAATACTTTTCCCCGACGAAA GTTTTTCCCAACGAAAATTTTCCCCGACGAAGTTTTCCCGATAATTATCA CTCAATCACTGTTAGAACAATCAACTTACCTCAGAACTGGGACTCTTCAG CCAGTGAACTTTGGCCAAATCGTAACCCTGTGTTGTGTTCAAAGCATGTT CGAAAACATGTTTGACACAATTTAAACTAAAAAAAGCTAATGCTATAAGA GCTGTCCTCAATAAAAAGTGAGTGAAGATAAGATTTTGGCAGTAGCATTT TNGGAAAATTTCAACTTTTTACCCCCTGAAAGATCAAAATTTGGTCAAAA TTGGTCAAATTTGTTCCGCTAAGGGTCGTAAAATTCTCAAATTTTTTCTT TGTTTTCTCCTTTTTAGTCCCGGTAAGGGTCCAAGGTTCGAAAGTCGGGC GGCATCCCCCGTCAGCTCGCAACCCTAGTACCCCCCGGAGGTTCCTTTCA GTCACTCCGCCATCCTCAAAAGCTGAAATACAAAAATATTATAAGGAGCG CTAACTATCACTAACTAGCGTTAAATAAAATTGGGTTTTGACGAAAGAAT GCAAAATAACATACCTTTCATTGTATAGTTCACTATTTCTACCCCTATTC ATTCTTTTTTCTTTGCTTTCAGCATGGATCTTGGTCATTCTGACAGTGTT CAGCACATTGTTGATCGTGATTGGTTGTTTCTTTCTGGTAGTCCTAATCA AATATCGAATCAAGCAACGGAAGTACGATCAAGTATCGGGGTACGCTAGT TCTAAAAAGAAGAAATACGTGCCCGGTAAAACAGCCGCTTATTTTAACGG TAGTTTTAGTGATACAGTTCCGCTTACTTACCCGACCACACTACAAGCCG GAACTCCCGTTCTTTTCCCACCTTTCAAAAAGAAACACAGTTACAGCTCC GTCGGCAATCACAGTTTCTCACCTAAAACACGGACAGTAAAATATCCGGG AACGCCGTCGTCGCATACCTTAAACCGATGCGCGAGTTTTGATGATCAGT TATTCCGAAAATCCTTTTCGTTGAAATCGTCCGATTTTAAAGTGAAAGAT AGTCCGTTAGCACGTGACGATGATAGTAGAGTTAGTAGCCGAAACAGCAT GGGTGGTGGCAGCGAGCTTACAGAAACATTGCGTGCAGGCTACACGTCAA TAGATAGCCCAAGGGATGGCTATGGCTCCCCACCTGATCCCGTCCGCATC CCAATCAATAACGAGACGTATTACTCACACTCGGAATTTTTCTCAGACGA CGATAATTCATCATTACATCCATCCAGTTGTCCGGAAACCGAAAATGTTG TGAGTTATGACCAAGAAACGGATTATAAAAACTTGAGTAAACAACCTTCA ACCAACGGTCCTGCTTTTTTAAGCTTTCAGTTACAATACAATTCCAAGGT TCCTGAGTTAATGGTTACTGTTAAGAATGCATTCGATCTGCAACCCAAGG TGGATGTGACGTCAGATAATGTGAACAGCTATGTCAATTTATGTTTGGTA CCAGAAGATTTCCTTTGGAAGCGAACCAGAGTTGTTGAGAATGATACAGA TCCAGAATTTAACGAAACTTTTCGCATCAGAGATGTTTTGTATCATAAAT TACGTGAATATACATTGTGCTTATTTGTCATGGACACACATCCATTGTTG GGGGAACGTCCGATAGGTAAAGTTTTATATCCCTTGTCCGAACTTCGAGC TGAGCAAGCAGTCGATGTCTGTCAAGAGTTAACACCACCTTAAAATGAAC GGCGAATGGACAATTACTCAAATCAGGATCATGTTTAGTGGAGCTCTTTT TCCCAAGGACTAATCAACAAACAAAACGACCTCGGGTTTACGCTTGTTTT TGACTCAAAATATTACGACATGAATATTGATTCCCGATAAAACCAGTGTC AAGATGATCACGTGAACTCAAAAATGACGTAATCAGGGTGTGTTCGAAAC GTATGTAATAAAGTCAACAAAAGTGAAAATTGACAAAAAAGTTCAGGGTT TAAATTCTGAATTAGACTTCCAAGCTTCTCCTATAAAGCGGAAATGAAGA TATTGTGGTAGTCGTTGGTTTTTTACCTAACGCTTGTAACATATTAAAAT TTTTCGTGGTAGAATTATTAGTTGGTTTCTTTAGTGTTGGATTTTTCAGT TTTAATTTTAAACCTGGATCAACAGAGATTCAAAAATACTTTTCGCTATA TGAACACTGTAGGACTTAGAGAAAAATCCTGGATGTTTTCCGCAATTTTT ATAGCCGAATAAGATAAATGATTTTTAAAATGGATAATCAGATGGTTTTT CTTTTTTATTGTCCTGAGCAAAAGCTGAAAATATTTTTGTATAACTATTT ATCAAAGTCGAGGTATTTAAGTTACAAGTTTTTGACTTTTAGTAAGAGAA CATTAGAATTTCAAGGTAAGGAATGTTTAAGAACCCACTCAAATTGGTTT CTGTATATCTCAAACCATCTGATTATCCCTTTAAAATGCATTTAAAATGG TTTCACTCTAATAGGAAGTATACCCATTGAGTTTCAAACCAAAAGGGCTA AAGGCGAGACTCCTGGATGGGAAATGAAACCACTGATTTCCCATTCAGAG CGTCCACGCGTAATTTTTACACAAACGCCGGATTGAAACGCCGGATTGAA ACTAAAATGTATCGTGATTTCAAAAAGTGTAGTCCTTCAAAACAAAGAAG TCGCTAGATATAATCCGTTGTCGTGATTACGGCGCGTTCTATGCGCGTTT TGGATGGGAAATAAGTAGCTTCAATTTCTCTTGCCTTCGGGCTTGAAACT CGATTGAAAATGAGTATACTTGTTTCATAATTGGTTAACGAATCACTCAC ACCGTACGTCTCAGTAACTCTTTCTGATCATTCTTTTTCGTTNTAGCTTC AATTTCTCTTGCCTTCGGGCTTGAAACTCGATTGAAAATGAGTATACCTG TTTCATAATTGGTTAACGAATCACTCACACCGCATGTCTCAGTAACTTTC TGATCATTCTTTTTCGTTATAAAGCATATCACCATGCAAATTATCATTTT TCATTTTCAATCATTTTTCTTTTGTATCTACTTTCTAGAAAACAAAAAAT ATAGAAAAATAATTTTGAGTTCAAAATCAGATTTTAAAAATGTCTCATCA AGGAAGTGGGGTTTTCTTATAAAAAAACCGTACATCTCCTGTTGGAGAAG GT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072501TCONS_00072501Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072501-proteinTCONS_00072501-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_78supercontigscaffold_78:42472..51623 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.19 8.93 6.28 4.52 16.64 13.92 14.62 16.6 7.72 8.95 7.31 7.19 3.67 4.57 3.28 2.96 3.24 2.25 3.84 4.11 4.11 5.6 7.23 6.87 2.23 2.5 1.38 1.39 3.18 4.48