XLOC_044948 (gene) - C. hemisphaerica

Overview
NameXLOC_044948
Unique NameXLOC_044948
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_77:523138..529503+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044948 ID=XLOC_044948|Name=XLOC_044948|organism=Clytia hemisphaerica|type=gene|length=6366bp|location=Sequence derived from alignment at scaffold_77:523138..529503+ (Clytia hemisphaerica)
ATGGAATGCAATACGTTGCTGATTTAAATGTAAGTAAATGAATTATTTAG AAGAttattcccagctggcacacaacgttgtttcaacgttcatctgacgt tatatggacgttgtgaacgctagaaaaacgtcgaaacaacgttgtgtagt ATCGGCTGTTCTATATTTTTATTCGTCCTCTTAAATTGCTTCTGTTCATG CCCAGATGGCACACAatgtcaaaacaacgtccatgtgacattcataacgt ccaaataacgttatttgaacgttaaaacaacgttgtgtgccagctgggtg atCCAATAGAGGATAAAATGGATTCTTTCGTTGTctcagaccatgttcac acgttacgtGTTATTATCGCTCTGGTATGATAGTTCTTACGGATAGAAAG TGTTCGTATtgatttcggaacgtttcggagcaagaaaacggagcagtttc GTTCCGAAGAAGAAAGTGAAGCGAAAACATTTTGCTTTGTCACGTCTTCT TTTtcgacgtttcgaattttgacgttcgcgCTTGTTTCGCCACCTTTTCT TTTCGGAGCGATACGAAATTGCAACGTCCAGAACGATGGTTGAACGTTAA AAGCATCGCTTCCTttccaagctggcacacaacgttgtaaACCGTTATTT GAAGGTTATAAGAAATACCTGCCTTTTTGTAGCAGTGTTAAAAGTTCATT CGTCTCAGCAGAGTATATAAAGAGGTTTCcacgtctcaaaattctgcttA ATTCACCAAAATATCTAGAATtatgtgctaatttgctgtgtaaaagCCAT TTTCCGACCTTCCTTTCCTTACTGGCCACTGTTTTAGGCTATCGCATGGC ATAAAATGAAACAGTTCTAAGAATTCTTAGCCACCCGACTTTTATGTCAG CTGTATAATCGTTTATTTCAACAACTTTTTTACTTCAGATTGTACACCGT GATTTGGCGTGCAGAAACATTTTAGTTGGTTACAATCGTGTATGTAAAGT TGCTGATTTCGGACTGGCTAAAAAAGTTGGAGATAATGGAATATATCAAC GTACAGAACAGGTATCTCTTTGTTTTCACTGGAGCGATTTTATTGAATGT TCTTAATCAACTAATTTTCCCGTAGGATTTATCATTattgaccttttcat aaataacgtcacgaacatcacttgcctcgtattcaaacagtTACCAttgt gattatgtcccttgagacattaaatgattttttatgaattgaaaGTAGTT TAAATAAAAACCGCTGGGAGTTAACCACTATGGCAAGTAGGAGTTGACTA CTCAATTCTTCGCTACTTCGataaaatgggtgccgggtatgtgcgagcca caAGATCTTTCAAAGAAGTACAACAAGCGATAAATTAACAATCGATTCTC TGAAAGGATcccaaaattacgaaatatcaaaaaccgactccctcaaaggg tcataaaatctgataattttgagctaaaaattgGAATCAAATAAACTCTC AAAGGGTTGTGAAAACGTCTAAATTCAGTCTCTCAAcgggtcgattttcg aactttcccCGAATCCTTAGACAAAGAGATTTTATAACTTATCAATGAAA GAATCCTTCTTATGGGACAGAGAAACTAAAAATTGAtcacttttttatca tttcagGCAAAACTACCGGTCAAATGGCTACCCCCTGAATCCATCAAATA CGGACGATCATCTCTACAAAGCGATATGTAAGCAAATATTTAATGTTCAT TATTCAGAAGaccaaactcgaacccagccTCTTAGTTCTTTCACTTACTA GTGTATCATGTCCTAGCGACCGTAGTTAAGTGGCACAAGGTCGTGGGTTC GATCATCGGTcgagtcataccaaagattcccaaaatggtacttgatgcct ctctgcttgatgctcagtaattaagagaagaatcaagggtaagtggagca atctaacgagaaagagtggcgccctcccctaccttcgggtggaTAGCTAT CGatagaggagccttcgggtcgcttccgactgcggtcgcaaacttactta ctactaTGTCCATCGATAAAATATGAAAAGTGGTGCTAGTGTCTCTGAGT AAAACATTATCTTCAAAAGACCAAATTTTCTACGAATCACCGAGAGTGTT TTGTAGGAAAGTGTCGCATGAGCACACGATTAAGTAGACAAACAGAGAGT TCATGAACGTCATGTGTACGTTGAGAGaatgttatatggacgttataaAC GTCAAATGTACGTTGAGAGaatgttatatggacgttataaatatcaaatg tacgtTGAGAGAATGTTACATGGACGTTATAAACGTCAAATGTACGTTGA GAGAATGTTATATGGATGTTATAAACGTCAAATGTACTTTGATAGAatgt tatatggatgttgtgaacgtgAAATGTACGTTCATAGGATGTTTTTCTTT CCATTTCAGCTGGTCATATGGTATCATGATGTGGGAAATTGTCACCATTG GTAAGAAAGAAAtacatgatattcatgacgtaacgtcttctacggaaaga ccccggttttagccagtagtggcaaattttatacaacttttttttagttt gaattttccactactggctaaaaccggggtatttccgtagaaaacaatac gtcatgaatatcatgaaatcCAATTTGAGAAttctttattgatttatttt tcttgacaAGCTCGTTGGCACAACCACGGTGACCCTTCCTAAATGGAAAA TTCGGCCAGAATTTTGTCCCTGTTGGGGAAAAAACCCTACAATTTCTccc ccactgaaaaattgactttgatttcatccccatttcaATCTTAATTGCGT TAAAATCGCACTTCAAAATCATTCCAATTTGATTAATTTTGACCTAGGAA CAAAAAGATTTCTATCCTCTCCCAGCttgcacataacgttgttttaacat tcatttgacgttatatggacgttgtgaacgttcaataaactttgaaacaa cgttgtgtggcaGCTGGGCTTTAAGATTTCGATGTAAGTGTTCATCCCTT GTGAGAAGTACCTCCTCGggatctttttcttttatcagcCAGTAATAAAA AGTGCCTTTATCTTGAATTTGgtatttccagaaaaatattgaatatgggg gatggaggatataacattttttggaaatttaccccggacattgtgaattt tgacctcccccggacagcaggtctgaCCCCGTCCCGGATAAGCATTAGTT GTTCCTCTGGACACTCAAAATTagcctcaaacagagcaaaattaccccca aacggAGCATTTTCTAGAAGAGCCCAATTTGGTATTTAATAGGTGCCGTG CCATATCCTGGTCACAAATCCAAAGAAATTCCTGGTCTGTTAAACAAAGG TTATCGAATGGagaaaccattgcattgcaaaGAAGAATTGTAAGTCACTG ATCTCTAACTTcttgactggatcgggcttCCTATATCAAATGAAGCACTC TAGTTTTAGAGTTGActagtccgccatcttgtttttaaTGACTGGCATGA ACAGCGGGATACGAATATTTTTCAagacaaaattgaaaacaacATGGCGG ATTTGGATACGCTTCCACAGGAAATCTGTGAGCAGTTAGCTCATCTGGTG TGTAAGGGAATATCGCTgttgacaaatcaaaaaattaaatttgagatTGG CCCTTTTTGCATAGTGCTCCTCACTATGTCCCATCTACGTAAAACagggt caatctcaaaatttatgttCAGACAAACAGAGAAACTCTTAGTTATCTCA GgcaataattttgagatttgaCCTTTTGATTTGTAAACGGCGATATGATA TCCGTGGATGAGACTATATTAATACCCCAGTCATCGTCAtataaaaaata ctaaaaattatAGGTGGTTCAAAATAATAGGTCGTTAATTTCGTCCTCTC TTGATTTCAAGTGTGGAAAAGTTTGGCCTTTCGTCTTCAACAGAATACAG AAAGATTCAAACAATATTATCATGTTTCAATTGCCAATGACATACTATGA GACTTTTACATTCTGATGATGATGGTTTTGGCGTTTGATATCAAAacaat atgcaaaaatagatattttttctacgaagtgatgaaatttaatggaacaa tAATACGTTCAAAACAGGTTTAAAGATTGAGgaatataacacccctttct cacagaccaactgggaccccttcccactggaaataaTTGGCCAAagaatc gtccccggtggaaaattatactccaattctGCCGTTTCAGAGCCAAAGGA GGTaagttacaaattttcaaaaaatcttttttttcaaaaatcatggtTTT TTGACCTGCTCTATCAGATGGTGTTACTNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatgaaaaaa tgttttgaaagtgaaaaattggaGGTAAGTTACAAAATCTGTTTAAATAA AAAGCTGTAAGtaacaaagattttccaaaattttgcttAAATAGATGTAA GTAACACATTTctgaacaaaaaatgaattaatcaAAATACTTTCAATAAG ATCTGAATAAATTTTATGGAAATCGATTCTTTGCTAGATTCTTTATATTT AGTGTAAAAATTGGTACTAAATGGTCAAAATTGATCCTGCTGAcacgttt ttcttgatttattcCAAATCcagaatattcaaaaattgttaCATACCTCC TTTGGCTCTAAAACGGCagaatttttgtccccactgaaaataatcaaaaa taacaattcTCGTTGCATGATATTGTGCTATTTGTCCCATCTTCACTGAA TTTTCTgtcttgaaaagaaaagaattgaATCCCCAGCCacaaaaaatatg agaatataTATTCCTTTTCATTTCCTTATTTTCTATACCCACTAGCTGAA GAATCGCACCGGGTCCGTGGGAAGGGGGTGTAATATACAATTATGCAAGA TCGGCTAGATAAATAACTAACCTTCAAATAATAgaacaaattttgatttt attgtttCGCTTTTTCAGGTATGAATTGATGTTGCAGTGCTGGagtgaag atgaaaagaaaagacCGAATTTCAAATTCATTCACCAAAAATTAGAACGA ATGATTGAGGGACTGGTAATATGGATTCTTTCAAACAAAGATTCTCATTG AAAATACTCTTATAACGGAAATAGTCTGTACTCTTTATGTTGAGGgcgtg tgacgtccagggtggtctggaaaaaaaataatccagggtggtcagtaaaa atGAGGTTAAAAATCCATCAACAGGGGTACAGTTTTTTTCTGGGTTTTCC TGGCTTTTTCTATCTGCTTCGAACTCAAAGGACTGTCATTGGGGGTGATT CTCCTAGAATCCACTGATCATGTACATTCAAAATATGATAGAACAAGTTT TAATGTTTCCTTTCTGGTAGGGAGGGTactctttaaaaaattaatcaaac ccTTATAAAAGGCTGGCTTCTCCTGACTTTTTCTCGGAGTACCTAAAAAA ACTACTCCTAAAAATACTAGACTTTTTTGACCATCTTGAAAAACACAACT CTTAAAAAGGACTCGAAAAAGGactggatttttcaatttttctaaccttt ttttAGTTTCGAACTCACAAAAAGATTGGATTACACCCTGtatcacagcc ccggtgggactTTCTTCCTGAGTGGGATAAAAATACCTCAATCTTATTGt ttcaagtttgaaaaattcaatggggatggttttggagtacaactTTTaag cattgaatttcgagtAGGGATAAAATCAGAGTtaatttctcagtggggct gaaattccagctgaaattccaaggtattttcccactggggactaattttt tgccaaattttctggGGTCCCAGCatgtctgtgacacaggggtgtttaat cTACCCGTTTTCATAAAtctgttcttgtaaaaaagtatgtaaaggaaata ttttacttttttttcagtcaaCGTACATCAACTTGGAAGCTTACTCAGAC GATTCGTATTTGACTTTTGGTGCTGGAGATGAAATTTTGGATGAAGATGA GATGATCGATATTgaggatgaatgaatgaatgaatgaatgaatgaatgaa tgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatgaatg aatgaatgaatgaatt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072387TCONS_00072387Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072387-proteinTCONS_00072387-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_77supercontigscaffold_77:523138..529503 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.25 0.11 0 1.78 1.41 1.95 2.59 0.29 1.55 0 0.4 19.28 21.82 11.22 7.54 0.87 2.02 0.76 1.34 0.96 0.91 0.77 0.83 0.63 0.47 1.67 1.08 1.28 0.9