XLOC_044946 (gene) - C. hemisphaerica

Overview
NameXLOC_044946
Unique NameXLOC_044946
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_77:509329..517139+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044946 ID=XLOC_044946|Name=XLOC_044946|organism=Clytia hemisphaerica|type=gene|length=7811bp|location=Sequence derived from alignment at scaffold_77:509329..517139+ (Clytia hemisphaerica)
GTAAATAagacgttaaatgaacgttgaagcGACATTCAGAAGACTCGGAC ATGTTCATAATCTTCGGACAGTTTCTTGTGATTTCATATTTTGCTTTTGT ACATGCTGAAAGAAGTAAGTATAGTATTGTATCAACACGGGTGGGTGCGG GGCGTGGGCTGGCGGCTGAGCGTGGACAGGCGGGCTTGCCTTCACCCCGT ATAATTCACAATGGCTTACATTTTGACAATTCTCTTGATAAGGATTTAAG TGAATGATGCTGTGAGACCGGTTGAGTATTTGCCTGGATTTTTATGGGTT AGTGGGCTATTTTACCTTCTAAGGAAAGTGCATTACACTGTTGACGTTAT ATAATTCGCCACTCAATGTTTTTTCTACATCCACGAAAGGCTTTAAGCTC TTGTGTCTGATTTTTCGTGCAGGCAGTTAAAAAGTGTTGAGTTTGAACTT TGAAGGCTGGGCCTCAATGTGTTATTTTCAAATTACAATACAAAAGCGAC CGTAGCGCGAAGGTAGTGCATCCGGTTAAAGTGCATAAGGTTGTAGGTTC AACACCTAGCcaagtcataccaaagattacAGCAATGGTACTTTAtatct ctctgcttgatgctcagcaactaaaaaTACGGATCAGGGGTAAGgccaac ctcgtccccatgtattccaggctttatttacgttactgatggacgtCAGA GTGAAGagaaaaaagctgataatgcgcagggaacgaggttggggaAAGGA GTGACGCACCTCTACCTTCCGACAGATAGCTTGTGTAAAGGGAGTCTTTT AAGGTCGTCCTCAATTGCGGTCGCAAATACAAACTTTACTTATTTATACT AAAAAAtccattatttattttttaggtGCACTGTATGAAGCCAGTAAAGT AGGATTTCAAAACTGGACCTTATATCACGCACATCAAGGTTATACTCTTG AGGTAAGtgacgtcgtttcaacgttcatctatcGTCCATAACATTCACAC CATCatgcattgggcttttccaggaaaacattttacccccactgttgagg atattcactcttaaaaatatgctcaaacCCCttgatatcctctcttataa agatgcttacccctggatatcgcaTTTTTACTTTATCCCCTGAATATCCG CTCCcctgtagatatttaaccccctggatatccacttttgaacaaaaatc gttaaccccctggatatgcgatatcctcaacatgggggggggggcacggg cCATTTCTGGAGACGCCCATTTGATAGCAAGGGATatcttcaaattagcc tatcatcgATTCTTTCAGCATATctgaaaacaaacttttaaaaatatttt tcctcaaAGATTGAATGAAAGAAGCCTTAGCTTCCACAAAACGATGTAGA ATATTTATTTGCTCTATCAAGAAGGCAAAATTAACATCCTATTCCTAGAC TATTCCCAGAGAACAATTGCGCACTTTTTGACGTCGTTCTAACAACtgca atatttttcttgaaattttgtgaatttacgctttaattttgctttttaat ttttacgctttatgttttttttttgcattaggAGTTTTGGTAGCCTAGTT AAcaaagcccgtattcacaaggctaggacacacggcttatggcaatatag cgtttttcggcgctttaaagattttttatatttacggattttaagtttac cttggaatactggcttagggaaagggcgcgttcataatatgaacgcagga ttcggtgagcttttgattggtcagagtgggtcacgtggtcaaaaatcggg agttttcatgagcgatagaagtttataattattttatcagtaAACGAGTA GAAGAGGTGGGACTCAtaatgcaagatctttcttcgattatattatgatg tgagactattaACATGAAAGAgccgagagatatatttggaatactgtatc agaaaaagttttcaagacctgatcccgacctgatagtgcttctcttgttt ttgggaagaattgaactgatgaagaaaaaagaatgctattcgtcgtaaag acagcaaaagttgcttgtttacagaatggcaaataataaagtaaagattt gtgattgaacatttgactatcgtatgtggcaatatataagagagagtact tgtacagatcctatgctgtagttctgtattctgattggattgcatgacat gatattgtattatactgtaatggatagatgatagacagttcttggacaaa ataaaaaaattctaaataatgttttgatattatgttctgtgtgtggtgtg atttcatatttttgatatgaaacgaattaagtcaacgacgaataattatg caaattatgtgagtttacgttatccctcgccgcgaaatttgaattgtcgt tgttgtcagttgataagctaccgagtttactgtccctaagctagttattc agtcacaacttaaccatcagatttatccaagtgactgaatcaaactagct tagatttctaggctagagTTTCGGCACGAGTCTATCTAAACGTTAAATCT ATGGATAAATCTATCTATGGATAAAGACTGTTTTATTTCTGGCCTTTAAT TTTCTAATCTTTAACAACCGTCTCAGGTTGAAgttattttgtttcatttt gtttcatttagGAGTTTGGGCACGAGTCAACGGACCAATTAGATGTAGCT ATCAACCAAACAGAATATGAAGGTGTTCGAGCTATTTCTCCAATCATTGA TATTCGGCCGGCCTGGAAAATCTTTGTCAAGGTTTGTCTTTGTAACTtgt tagaccatgttcacacgttactgcttcgtttcgctccggtatgattttcg ttacggattgAATGTGTTCATCTTGGTTTCGGAAcatttcggagcaagaa aacggagcagttccgttccgatgaaaaagtggagcgaaaccgtttcaatc tgttttgctttgtaacgtcttttTTGACGATTCCAATTTTGACGTTCGCA CTTGTTTCAacaccgtttcgtttcggagcgataCGGAACCGTAACTTAGC TGGTAGACTGGCTTTTTATATTACAGAATATATCTGGTCCAGTTTTTAGA TCAAGTGCATACTGTGGAATTCGGCATTACATACTGGGGAACTCACCTCA TCTATATATTTTTAATTGTGGAATCGATTCCATAGATTCCACAGTCACCA ACAGAACACCACTTCTCACAGCCCCATTGAAACTTTTTAATACAGCGGGG ATAAAGATTTCGATTGAAATCTTAAtgaggataaaaattctattgttcaa agattaaaatatccagtggggatggttttggagtgcaatttctaaacatt GAATCTCGAATGGGGAggaaatcaaagttaatttaGAGTATTTTTCCTAG ACCCAGCGGGTCTGTTACCTTGGGGTGTAACAGACTCCTTGAGTTTGTAT ATACCCAATTCCCCATATGGTATGATAGTTGATTCTCAGAGTAGTAAAAC TTGAAGACTcaagcccagctggcacacaacgttgttttaacgttcaaata acgttatttggacgttatgaatgtcaaatggacgttgttttgacgttgtg tgctgGCTGGGAGGggaatacagtagagtctctttaactagAATATCTAT AACTCGAGTGtccccttaaccctattcaacctaggcttttaagggcggtt caaaactagaGAGAGGGGGGCTTTTCATTTACCACcattaacttttgatc tagaaaatttcctttgttcttataaatagctattgtattctaacaaagac taaataaaaaagttgcctgagtctaaaatgcttattttatcctaaatatt cgataaattacggtttaaacgatatactTGACATAAAGTATAAATTTGTA TTGAAAAAGTgtaaatttttgtgacaccttaatgtcatcatgctcaagat gtgaaaatttttaggtgtcaaattttattttattttgaagttaaataaaa gttaggaatttacagaaaatttcatggcaaaagctctattatttcaggag ctattaccattaatctgacctccgaacagaaacagcccccccccctaggc cgaatagggttaactcAAACCTCTAAACTCAAACAAGCTGTCTcgcccct tcagttaacaatgccttataaaccttactccattaCTTAAATTTTCCTCA AcgtgaacaaatttgtgttccccgtgtgtACGAGTTATGGAATCTCCACt gtaatcaccttggtaatgatTTCAAACCGAGGCACTCGTTGCACTCAGAA Caatacactttttcgaccgtagcccccaattgccgcgtgggcattttgtt gtccgttttaccaccataaactcgatccaatccttttttacaccttttat TGGTGCGAAAAAAACTGGgacgagtttagggtggtaaaacgggcAAGAAA ATGTCCGCGTGGTAATTGAtggctacggttgaaaaggtgcagggtcggat acaggaggtaggctatcttatttatggagagtaattagtttccatataag gtaatacgataataaagtgcactctcctttattggttatagcctccctat GTATCCGAGCCTGAGGTGGCTTTTGGAAAAGACCTATCATTCTTTGTTTT TAGTTAACAATACTAAGCAATGGTGTGCCGGTGCGCACGCGTGATCTATG CCCAAGTGTACACGCATGCGCACAAATCATGTTGGGTTCAACAAAAGAAT CTCTAAATGGTATTCAAAATCAACCGCAGGACCTCCAACACAATTTTACC AACCACGAATTTGAGTCAGGGTATCTCTACAACACAGGTATTGTTAATTT TCTAATTTGACGCGTGCTCTGTtttccaaaataattatttattgccacgc gttaaattagaaaatctaCGGTATTGTTGACTGTTATTCttttaatttat aatttaacACATTCAGTTGATTAGAGTTtagatttttataaatttttgat aACGTTTTAAAGTAGAATAGGAGTACTTGACATGGTCGTTCTGAAAAATG AAGCTATTTTATTTGTTAATTGGCCTTAATTCTGGACTTCATTTTAATTA ACAGAATGGCTAATGCAACATCTTATTAATGGAATCGGGTTCGGGTAAAA TGACGCAATTCTATTGGTTAATTCTAGGCCTGAAGTCATTTTTAACCAAT AGAAAAGCTAATGTAGCATCTCATCTCGTCCATAGAACCTGGTGTACCAT TTGTGAAAATAAACGTCCAAATTATATCCTTTGGGGACGTTCTAAAGACG TTCAACATCACTGAATTAATGGTCTTATATGATCATTGCCCTGAAACTGT ACAACGTCTTGCTAGGTAATACTTTCttatgttttttgtttaaaaaatct aaaagacagttgacgctctctaattcgacgttctgcTATTCGATactctc ccttattcgatgagaATCCCCAAATCCAATTCTATCCTTGAACATAGAAT AAGAGAGTATCGACTCTACACATTGAAATCGGTtaactttaaaagaaaaa gtctagACATAAACTTTTTAagtaaatttttgctttctttttctttgaaa gaTTTATTCATTATCACTTACTATACGAAGTTTCATACTTGTATTATCTT CGGGCAATGGAGCATTGCATTGGCCTCGATGAGACGATTGAAGCGAGGGG ACTAAgactttgagaaaaaaattgtctACCAAGAAGATTAATCTGCTAAA AATTGAGAGAGCCATGGCCCACCACCCCCTCCCTGTAGACGGGGAAAGAA TTTTATTTATGAAAAAGTTCTTTTTGTCTAGATATTCAAACATCCCTGCA TCGCAACACGAAGACAGGAGGATAGAAACCAAAGGAGAATGTATTGAGAA TGCTATCCTCGACAACCCACAAGACCATTTGCTGAGGTTTTGTGATCACC AGGCGAAAGCCAGTTTCTTTGGCTCATGTATTTGCAGTGCTGGATATGAA GATGTTTTGAATAAATGTCAAGGTACAATCTgcgtcaaaatatattgaga aattTGGTTATTTCCTCAAAAAAGTCGCTTTTGGACTATTTGTAAAttgt aatcgaatatttcaatttgggagggctttatagacttccaggctatattc tgagccctagtGGAccattcttgattttttgatcTTCATTTTCTAAGGTC CCAAGTCTTAAGTCTTGCATTAAAACTCAGGGTTAAAGCtcacccttcca acctaagtaAGAGCGCTTTCAAATCGTTTGTGGCTACAAGATTTAGAGGG AATTACTACAATTTGTGTAATCTAAAACATTGTCCATCCCTAGCTAGGGT GCTAGAAAGTGGTAAAGAATAGTCTCTGTAATTCGACTCTTTTTCTAGCT GGATTCGAAGAAAATACTCGATATCTGAATACCGAATCGGGGAGAGTCAA TTACAGTAGACTTTCGCTTATTCGAGCTTCTATTACTCGAATCTTCCTAA AgttcgaacttgtttccagtccccgtcaaggagaaaccttcTTAACTCTC TGTAGTTCGAGCAAATAAGATTTCCCTTccgagttcgaattagcaagaGC CAACTGTATATGTATTTTTCCCTTTCCAGGAATCGGGTTTATAGACAGCT GGCacaaaacattgtttcaacgttaatctaacgttatatggacgttatga actctagatggacgttgaaacaacgttctTTGCCAGCTGTATAGCTGTAC CGTTTATTTTTTAGAATGCAGAGGCGGCTATTTCAGAAAATCCATCACTG CTCCAAAATGTTCCAAGTGTGGACAGAACACTGATGTACTTCCAGGGAGG ATTTTTTGTCAGTGTAAACAGACCCCTTTACGTTATCACCGGTTTCAACA TGAGAAAGGGCGCAGTGAAAAGCCCTGCTACGGTAAGATTCATTATCAAA GCCAAGACTGATAGTGGAAACCATTCCCAAAGAAATTACTTCAATTACCC TGACATGGTTTCTACATTGTGGCAAAAAAAATGTACATTTATAGTGAATG gactttaatttgatttttaaaaggATTTGGAtgttcatcgaataagggag cgtgtCAAATGGTAGAacatcgtttatgagagtttttgtagacggtggct ttcaatattatGGAGAAATGGAGAACAAATAGAATAGTAAGACATTGAAG TagaaagcgtcaactgtatataaaAGCGAGATTGTTATCACTGAttttag ttttgaaagtttcagCGTATCCAAACCGTAGATTTCTGTAAATccctaga tgtcgtgctttggctgataTTCACATTTCTTTGcctggaagagcttaaag cacgacatctagcctttcgggatttacagaaatctgtgatcCAAACCGAC CACCCTGTATGGAAAACCCTTAGAGTTTTTATTCACGAAGATAGGTCAGG GCTTTTATGCAGCTCAACATTTTGATCATTCGAAAGTTTTTACGACAGAG ACCACTGTGCATTATATAGAGAGAACATTGAGATGAGGAGTGGAGATTCG AACCGAAACTCTCGGACACTGCAGGGATACCCCTGGATGGCCAAACggtt tttcaaataattttatcaTAGACCAATAGAAGGGGTCTTATTTCTTCAAG GTTTCCGAAGAAATCGCAACTCTAGGGAATCTTCTTTTACTAGTTTATTT GGAATGGGGAGTCATTACTCAGGGGGTTAAATTTTTTGTTGACATCTTTG ACACTGACACTTTCGAAGCACATGGCGGTCACTACTTTTTCTCTTTCAGT ATACCCCAGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072385TCONS_00072385Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072385-proteinTCONS_00072385-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_77supercontigscaffold_77:509329..517139 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.05 0.04 0 0.1 0 0 0.06 0 0.04 0 0 0 21.41 22.29 7.91 6.29 0.81 0.97 0.14 0.1 0.04 0.13 0.05 0.05 0.05 0.04 0 0.07 0 0