XLOC_044902 (gene) - C. hemisphaerica

Overview
NameXLOC_044902
Unique NameXLOC_044902
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_76:141737..147461+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044902 ID=XLOC_044902|Name=XLOC_044902|organism=Clytia hemisphaerica|type=gene|length=5725bp|location=Sequence derived from alignment at scaffold_76:141737..147461+ (Clytia hemisphaerica)
aAGTTATGATaataaactttctttttaaaagttaggcgagaccaatttaa
tttgtttttctacgggtagatcgttagcaaaatatgggtcggtctgtcgg
taaaataagaataaatttttcatttatcagggttggcaaagtaccgaaaa
tgttttccaaaaattatctttcactttttttatcctcgatgaagatcata
ataaaatcttagtgtatggaatgcttgattttctaaatttttcaaatttg
attcttacaaataagtAGTGTGtataatatattgtagtggaaattcaatt
ttattatttttttgattttagcgaaaatagggtcgttcgggcccgtagaa
caacaaattaaattggtctcgccttagcaAGTATATAAATATTTGACTTC
TAGCTGTTTGTTGTGATTTTTTCGTGCTCGAGAATAACGTTATAATTTTG
TATTTCAACACAAGATGGCTGATATTATGAGAAAGATATTTTCACTTAAA
CCAGAATTGATCGATGTATCAAAGTGTACTCGACACACATTATTATATGA
ACAGATACAAAGAAACAGTGACGAGACATTGCTTCGTCAAAAGACACAAT
TTAATCTTGGAAATGGATTACTTTTCAGCGATCCAATCAAAGCAGCCGAC
TATCTATTGGAGNTGCTCGAGAATAACGTTATAATTTTGTATTTCAACAC
AAGATGGCTGATattatgagaaaaatattttcacttaaacCAGAATTGAT
CGATGTATCAAAGTGCACTCAACACACATCATTATATGAACAGATACAAA
GAAATAGTAACGAGACATTGCTTCGTCAAAAGACACAATTTAATCTTGGA
AATGGATTACTTTTCAGCGATCCAATCAAAGCAGCCGACTATCTATTGGA
GAGAGAGTATGCTGAATCTTTCTTATTTGACCAAACTCGTCACCAGCCTT
TTTTCATACCACCCGTTTTCAAATCGACCCAATATAACAAAGGCCAATCC
ATTCTTGATTATGACGTccatttgaaaatcagagaaacaCTTgacaattt
gatgaaaaatgaccCGAATGATTGGTTTACTGTAGAGTTAGGCAAGTTTC
TTCAAACTCAATTGGATAACGAGACCAATGTCATCAATAGCCGTGATTAT
AACCAGTGGATTCTGAACGCTAAGGATGAGCTGTCATCGATGATCACACC
TTAGACGATTTGGTTATATTACAATCAGCGCAATTCATGACCAATGTTAA
GAACAAGAAACATCGAGAGTTCGACATTCTGATGTTCTCTTATTCCAGAA
AACTCGTCATCGGTATTGAGCTAAAGCGGACATCATCAGATGAAGCCTTA
GATAAAGCCTGTAcccaacttgaaaaatatcgaAAGTCACTCGAAGAACT
ATTAGGTGATCAGTTTGATAATGGATGGCAATTCTACCCAGTGATTTGCG
TGGAATAAGATACTCTGCCGTTCCAGACGCAACATTATATTAACATGACT
GTAGACTTGAATCTCTGGTTGTCAAACATTTTGAAGAGATTCCCTCTACT
CAGTAAAAGCAGTTTACCAGATTCGTTAGAACaccttaaaaatgttttaa
ggaTTATTGTCTTTAGCGTGCATGTTTCAGTGCCAATAACAAGCACGAAC
TGGGTGGAGTATATTACAAAAGCTATAGAAACAGTCTCTACAACAGACAA
TGTATTGTTctattcaaccaatcagctaccAGCTTTCAAATCGACTGATC
CGAAGTTTGACAAACTCATACTCTGGGGAGGATACGGAACAGGAAAAAGC
CTCTTGCTACGGGAAAAGGCATTACAGTTGAGCCGTCAGGACCCATCGTT
TCATGGTCGCATCATGTATGTCCACTGCAATTTATTTGACAACAATCGAA
GTCTTCAAGTATCATACTTAAAGAATATGTTGGAGCCGCATGGAATCATT
GTAAAATCTTTTGTTCCGGTAAGATTAAGAATAATTAAAAGTTATCGCAC
GGTACCGAGTgcaatatgggatatatttttcgagttcagatttttcgtgt
tattttccgagcctttaggcaaGAGAgtttagagaaaaatatttatccaa
tATTGTTCGAGCAGAAGTgttataccgggtgtgccaaaaaaaataggcct
aaaattgaaactttgacgtaacttttttcagttagaatagaaacttgaaa
ttttacatgcGTCTTTAGCAACCTATTTCGAAGCTTTACGCAAAGTTTCA
TTTGTACAGCTTTAGTAGTTTCAAAGATATGGAGATTTTCCTAAAGGATG
TGAAAATGTGTTTGTTtatagatttgacgtcaaaacaaaaaaattgtcaa
cCACAGTTCCCTAACGTTTAGTATCCGAACCGGAGTTGCGTTTGtttatt
tcagtttttgttttggAATCAGAAAGATGCAATTGCAGTGTTATTTTAAA
AGATgacattctattgcaaaatGGTTTTACTTACTAACGTTCAAGACAAC
ATGCATTTCTAACCATTACTGAAGAAAAATCGCCACAAGACAGATTGAAG
AATGGCACTTCTTTCTGACGAAGACAAGGTGATTATCAGACATTATATCG
AGAAAGAGTATACAGCTTATGAGATATGGAAGCTGAACCCAGCAAAGAAC
TGGCATTATTCAAAAGTTAAACGTGCCGGAAAATCTATGAAGCAATTTGT
TGGTCGTGTTCGCACTGTTGGTGAATGTAATGGTTCCTCAATTAAGATGC
ATTATTCGTGAACTCAAATCTCGGATNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCTTAAGACgcatgtaaaatttcaagtttctatt
ctaactgaaaaaagttacgtcaaagtttcaattttaggcctatttttttt
ggcacacccggtataacttgtttatcgtcaacttgaaaaatatcgaCAAA
GTCTTTTCTCTTTctatttgtctttttctttgtttcgtTTATTTCTTTTA
AGTTCTTGTATATTGataaaatcaacatcaaaacattcgaaaatgatTCT
AATATAgtcattaaaaatatcaatatattCTTTGGACAACTTTTATGTGT
ATTGAGAAAGAGGACGATTGCTCAtatttcatgttgacgataataagcag
atattcaataggtaaaagttggttattgagattaaTTAACCCaaggtgat
gtaatattcaacgaggcgaagccgagttgaatatacatcaccgagggtca
ataaatccaataaccaacgaaaacctattgaatatatgttttattatata
cctagaggcaaaaGCAAAGCATTAATTATGTCAATAGTCGAATGTTTCAC
ataaaacttcttttccttaatcgaatgtttcttttttaatgattttcttg
attactttgagtcataaaaatttgttaatgaaattgacaatagatttatt
tcaataaatttctttgataaacaACAAGAGTGACACAAAAAATctaactt
tgaaagcaaaatcaaacaagaaattctaccgtggtataatagccatgata
tatcatgaattattcaatggctgtttttgcctacaggtatataaatttgt
gttatcaatattttttacaccgagcagattctgatagCCTGCGCACAGCA
CGTATTCATTTTAGATGTCGTGGCTACGTGTGAGACTCTGCCTAGGCTAG
CGGACCGTTTTGATCCTTTTCATCAAGATTTGTGGTGAATGAGCTTTAAA
TGGACTTTAGAGCGCGGTGATTGGCTAATGCAAATCATTGCACCAAAACA
AACGTCAATCACAAACATAAAGATTAGAACACATCGTCTCTTTCgcttta
gtttttgttttcaagtaaaaGGCAACGCAATGAACTGATTTTGAGACTAA
AAAAGAGGTCATCctcttatgctgacaaaatagAATAAACGAAAGAATTT
CCATGAATGTTTTTACTTTTATCTCAAAATGCTGTGGAAAATGAGCAAAG
GGAATCAAAATTCATGGAATATTAAAAAGAGATGTTTGATCTGTTCTTAT
TTTAGAACAGAAGCAGTTTATGTGTACCAGCATTGGAAAATACTACtaaa
gatgaagatgaagaagatttGATAAAGATTGTTATTCCCGACAAttggaa
attattgccgaagtTTTTAGTTagtttttactttagttttcGTTTCCAAG
TAAAAGGCAACGTAATGATTTGAGAATAAAAAAGCTACATGCTCCATTCT
CTTAAGCTGACAAAGTAAAATATACGAAAGAATTTAGGAGAAAGAATgcg
ttctttttttttatctcaaGATGCTGTGGAAAATGAGCAAAGGGAATCAA
AATTCAATAGTCCCTGGAATATTAAAGACATGTTTgatctgtttttattt
tagaagaGAAGCAGTTTATGTGTACCATCATTGGATTCATTGGAAATTAC
TGAAGATGAAGATGACGAAGATTTGACAGAGATGGTCACAAAGAACAACA
TCAAGGCCATCTTTCTCGACGAGTGGAAAATATTTCCAAAGgaagaaatt
gagaaaatgattTCACTGGTCGAAATCTGCTGGATTGCTCCAGGCATTGA
GGAGTATTGTTATGATGCTAGAAATATATCACAAGAATTGAGgatgaatt
ttgaatttctagATTTAAAATTGAATCTACGCAACAGCAGAAAGATCGTT
GAAACATCCATGATGCTTAACCAGGAGTATGAACGTGAAACCTCATATGA
TCATGCAGGTATCACACTGCCTCCACAGAATTTCCCTTGTGGCCAACCAT
CTGTTTTTGCAGACTCTCTGGAGAAAGCTATTGCAATGgcaagaaaattt
acaaaaggtGGAATATTGGTTATTACTGCACCTGATGATGCATGTATCGA
GACTTTCATGCAGAGCACTGGTGAAAAATGGAAGTTGAATAGTGATCTTA
CAGAGACTGAGGATCCTTACAAGCTTCTGACGGAGGGATATATTCTATTT
GTTAATTGTTGCAAAAATGTGACAGGATTTGAATGGCCAGTTGTCATTTG
CACTCCTTATGATGATATCACTATCAGTCTTGAAGGTATAAACTACCATC
GTAGAAACATTTTTATGCGATGCACTACTTACCTTATTGTAATATCAAAA
CGTCAGACGCAATACTGAAATTTTTAGCTTGGACATAAACAAAGGAATAG
GAATATGTATATATACTGGATTTCACTTAAAAAGAAATATACAACAAAAA
GAGAAATTAATAAAGGCGTCagacaaaaaaacaaactacAAATTAACAca
ctccttctcacagacccagtagaaT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072315TCONS_00072315Clytia hemisphaericatranscript
TCONS_00072316TCONS_00072316Clytia hemisphaericatranscript
TCONS_00072317TCONS_00072317Clytia hemisphaericatranscript
TCONS_00072318TCONS_00072318Clytia hemisphaericatranscript
TCONS_00072319TCONS_00072319Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072317-proteinTCONS_00072317-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_76supercontigscaffold_76:141737..147461 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13	0.01	0.06	0.05	1.5	1.06	1.51	1.91	1.91	2.1	2.86	1.56	3.29	2.42	7.27	9.08	1.39	2.34	4.85	4.32	2.17	1.95	3.41	3.13	2.37	2.92	25.9	19.39	5.54	4.92