XLOC_044827 (gene) - C. hemisphaerica

Overview
NameXLOC_044827
Unique NameXLOC_044827
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_71:943370..951991-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044827 ID=XLOC_044827|Name=XLOC_044827|organism=Clytia hemisphaerica|type=gene|length=8622bp|location=Sequence derived from alignment at scaffold_71:943370..951991- (Clytia hemisphaerica)
CAGAACTGTGTATCAATGCAAAAGTTTTAAAATTGCTGGAAAAAAAAATG TGCATCAAGTTTCTAAAAGTGCAATACATTTTGTTGATTTGTTTATCAGC TATTGAACCTTTGAACGCTGATGAAAAAAAGCAGATTAAGGGATGCTGGT GTGGTCCAACTGAGCCATGTTGGCCTTCAAAACAAGAATGGACCAAATTG AATACAACTGTCAATGGTCGATTGAGATTGCCAGTATCCCCATTTGCAGC ATGCCTTGATAAGAAGAATCTGAAAGACAATCCAGAGTCTTGTCAAGCAG CTGTGAACAACTTTAAACAAGATCCCTTTTGGTTGCAAACTTTCTCTGGA GCTACCCAGTCAACAGGTAACAGACTTTTACGAATTTTTCATTTTGCTCT TTATGAATTTTTACTTACTGAATGAAATTGAGATGATGCGGGCAGAATAT CCTTTTTAGTCCTTTAAGTGCCACACTCCTTCTTTTCTAAGTGTTTTAAG AAAACCGCTACACGCTTTTTTATATAAGAATACAATTTATAAGAATGTTC ATGATGAAAATGGCCGAAAAATTAAGAAGAATCCTAAGAATACCACCATC ATGGAATTTTGCTAGCCAAGCTAAGAATGCCATTTTTAGAGCATTTTCAA TTATAAATTGTCAATTACCCCCAAGTAGGGGTCACCTGTTTCACAAAAAT GCCACTTTATGCTTGAGACGTATGTACTAAATGTTAAATCTAGTCTGAAT TAGGATCCTGACTTTAGAATGCTGTAAGAGTATTTTAGGATGATTTTTCC CAAAAAGTTAAGAATATCCATGATGAAATGGATTTACACCATTCTTATAA AAAAACGTGTAGTGGAAACTTTAAACACCTATATCTCCGGATACACGTTT TTTTTTAAGAAACTAGTTTTGCCAAGCAGCCTCAATGTTTCTTAAGAAAT AGGCCTTTTGAGCCTTAAATGTTTCTTACATGTTTCTAAACTTTGTCAAG CTTAAAGGACGCATGTCGATAATACAATAGTCTAATTGACTAATCTACGG TACTTTCCTTTCTTCTTAAATTGATTTTCTGACTTTCTCAAGTGTCTCTA ACTGTTATGTATGTATATTTCTGGAACCTTTATGGAAGGTTCTTAAAAAA AACGAATTGAAAATGCTATTTTCTCGTTCTCAGCCTCAGCATGTTTCTTA GATGTTTCTTAGTTTTCAGGCATTCTGAGCCTCATGTTTCTTAAAAGTGT GTTTCTTAAAAAAAAAAACGTGTAGCTTAGAGTCTCCTCTTTCTTTTGGT TGCCTTTGGTGTGCATACCTGACTGAATGACGGAAAGGTGCCCAGTGGTT AAACTTCAAATCAATTCACTAGAGGGCAGAATAAAGTAAAACGGGGCAAA ATTTTGAGGTTATTGGATCAAAAATGGTCAAAAAGCTGTCAAAATCCAAT TCTTACAAGTTAGACTAAAAATGGCGATTTCTAACTCAAACTGGGCATTA CAGGAGGGCTTCGCTCTCTAAATAGCCCATGCCCAATTTCCTCAACATTG GCTCTTAAAGGGTTAGTATCTATATATTAATAGTGATAGTCTGTATGTTT GTAACAATTACCGAGTCCAGGCTGAAAATTGACGATCGTAATATTACGCG CATGCGTAAAAATCCACATATAATTGATACCTCCGAGCACAGATCTGTAA AGCCCGAAGGGCTAGATTTGCGGCTTTTATCGAAAAGTGAAGCCTATTTC CTACCAAAGTCACGTGACTAAAATATGCAATTTCACCGGTTTGAGAGATG TGAAATAGCGTTTGCCGCCTACTTTTTTTTGATCTCGCGCCCCGAAAACA ATTAAAATGCTAGATCCTATCCATCGGCACGAAATTTAAAAAGTCAAATT TTTGCTTCACTTTTCTTTGCTGGAGAAAGCTTAAAGTTGCCTATCTAGCC CTTCGGGCTTTACAGATATCTGTGGTGGTGCATCCACATTCTNAAAGTTG CCTATCTAGCCCTTCGGGCTTTACAGATATCTGTGCCTCCGAGTGACAAG GTCAAATCTTTCTATATTATGCACTAAGAAATACTTATCTCCAAAAAATT AAAGTAATTAATTCTTTATTGCTCGCCCGACTCGAGTTGTTCCATATATA GAAAAAATTCCCTCCTGTAAATTAAGTTGTATAGCGACTCTGCAATGAAA AAATATGTCGTTGACACTACTAACACTGCTGGGCCTGTACGCCACTTAGG CTTTCTTGTTACCTACTTCAAACGTCACTTCGTATATAATACAAACTTTG AAAATGAAAAACTTTCAGCTCTCCTAAAAGACACTGCCTGTGAAAAAAAT TTAACGAATCAAAAACGGCCATTGACGGTTCGTCAAATGCTAGTCCTCAA ATTTTAAGTAGTTCATGCTGACGTTAGTAAAAAGTATTTTACTCAATTTT ATTAAGGGTTTCTAGGCTGAAATAGAATTAATGGCCCAACACTTCTTGAG ATGGTATTGATATAAAGAGTGCAAAATTTCCAAAAAAAGGGTTAGAACAA GTAGAGAAAAACAAACTATCTATTCCCAGCTGGCACACAACGTTCTTTTA ACGCTTATTTAACGTTCACAACGTCCATATAACGTTGGATGGATGTTGAA ACAACGTTGTGTGCCAGCTGGGTTGGATTTATCGTGTTTGTATTTTTTCA TTAGGGCAAGCTGGTGCATGGACAGCTAGTCAAAGTGAATACGTAGTTGA AGCTTTGAATGAAGATGATATTTCGGCTGCCGTCAAATTTGCTGCTCACC ATAAACTTCGTTTGGTTGTCAAGGGTACAGGTACGTGCATCATAAAGTCA AGATATTTCGATTTTTAACGTTTTCTTCTAATAGCCTAATTATTTGATCC TGAAAGATTCCAAATAAAAAAATAACTACTCCTGTATGCTTAATTGTAGG GGGATCATTTTGCAATTTTTGGAGAAAAAAATCACCCCCTCCCCCCATAT CACTTTATAAGAGACCCAGAATTTCCGAGTTGTTTTTTCCGAGCTAAAAA AAAAACCGAGTTACAAAAAAAAACGAGTTATCCCGAGTTATGACGTCATT TTTTAAATTTAGTTACGTCATTTTACATTTCATAACTCGGTTTATTTAGC TTTTTATAACTTTCGCAGTTATTTTTCATTTTTTTAACTCGGAAATTTTA GCTTCCTTTAGCTTTCTGAGTTAAAGTCCGTCTCAATATAATTTGCAGTG GAGACAATAAAAGCTAAAACTTTGATAACATTTGAATTAGATAGCGATTT TGTGCTTGTTGAAAAGACGAGCAGGAGTGGACTCACAAAGACGGAGTATA GTGTGGTTATGGTCTTAAGAGTAAGATTATCAAACCCCCTTCTGATAATA CCAAGTGCTAATTCGCTTTCTTTCTTCTCGAAAACATGCTCCAGTTGATT ACCAGCGAGATAATATGGATGTGCGTGCTTTATGTTTGCTAGTTTGCCAA GTGTTAAAACATGACATTTATTGGGATGGAACTTTAAGAGCCAATCTTTA GGCCATTCATTCAATGTATCTACATCCTTCTGAATGACAAGAGAATCATT GATGGAATTGACCTCTTTGAATATTTTCGTGTCATCTGCAAAAAGTAATA GGTCGGAAACAACTTTTTCAGGAAGATCGTTTATATACAGCACAAAAAGT AGAGGTCCTAATACATTTCCTTGTGATATACCGCTGATTAAATCGTCTAG CTTTGAGTGAAATCGGTTCACTTTCACTAATTGCTTTCTTCCCTTAAGAA AAGATGTTATCAAATTCTTGGTTGTTTCAGTGATTCCATATCCTTCTAAC TTTTTGCAAAGTCAGCGATGGGGCACAGTATCAAACGTTTTCGCGAAATC GAAATATATGCAGTTGACGACTTTAGCTTCCGACATAATTTCGCAGCATT TGTCTATGTACTTCTCTAGTTGAGTGACAGTAGAATGTCTGCTGATAAAG CCGTATTGCTTTTGAGATAGCAACTTTAGGTTTGTAAAGTATTTAGTGAT ATGCTCTCATAAGATTGACTCCATTAGTTTACAAACTACTGATGTTAGAC TCACTGGTCTATAGTTGACTGCTAGATTATGAGCACCAGACTTTATCTGG AGTACCCACTCCCTGCTTATTCCACCCCCTACAATTAAGCACACAAGAGA AAAGCTTCAGCCTGAAAAAAAGATGGCTTACTTTTTAAGTTAAGTTGCAA ACGAATCATTTGTGGATACAATACATATTCAACTTTTCCTGATCATGAGT CGTCTGGCTCGGCTTCGTGAGATTGGATAAAGTATGAATATATGAATATT GCCCTCAGTTATTTGAAGAGATATATAGCGGAATCTCGCTAGTTCTTCTG ATATTAGAAAGAATCTTTCTATAGCTCGAGCTAATCTTAGTCAAGACGAA ACCATTGCAAAAAAACCCTTTCTTTGAATCAAATCTCACTATTGAACAAA TCAGACTTCCCCAGGCCCGTTGGAAGCGGAGAGACAGGGGGGACTCACTT CAGCCTCCCCACTTTTGAGAAAATAAATGCGGTTTTTTTTCTCGAATTCT TAGGGAATTTTATCTCATTTTGAGCCTTCAGCCTACCCACTTTTACGGTT GCTCCGCCGCGCCTGTTTCCCGTTCGGTTTCAATTTAACGAAAGTCAAAT ATAGTCACGAGCCTCTGCAAACCTCTTAAATTTGATCAAAAACTTAATTC TTTAGGGCATGATTATTATGGAAGATCGAATGCACCAAATTCTCTACTTA TTTGGACTTACAATATGAAACAACTTGAATTTCACGACACTTTTAAACCT GAAGGTTGTAGTGATACAGAGAGTTATGGAGCAGTAACCACGGGTGCGGG GTTGACATGGATGGATGTTTATGCAGAAGCAACACCGAGAAATTTGGTAA ATCCCCTTGATACTGTTTAATCTTATTCCTAAGATTGCTTGTTTTTCCAA GTTCGATTTTTTAGGTATACCGCAACCAGATTTTAATTTTCAATNCAAGA CTGAAATTGCTTGTTTTTTCAATACAAAAATTAGACACAGTAGAAAGAGA TTTTTGAGTTTTCAAAGAATATATCAACCTCTGAAGACCAATAATAAAAA TTCTATCGTGCATGTGTCAATCTAATCACAGTAGAAAGAATCAAAGATGA AGAGTAAATAATACCATATTAATGTCTAGCTAACCTGATAACAGCTGTTC ATAATTTTCTTACGTGCACGGTAAACCTCTGAAGGCACTTGAAAATTATA CATCTGAGGAAAATAGTCCTCCCGCGGNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNAAGTCAAAAACTGATACGGCGCCCTATTCA TAAACACAATCACGCAACTTTGTTGTCATCCCCAGTCCTTTTAGACGAAC GCGATCCTTACGATTTCGAGATTGCATTTTCGTCAGATTGTTATGTTTTC ACCCATCCCTTTAGAGCTTCAGCGTGGTGGGCAGAAAACAACCACAATCT GATCTCAGGTTATGTCTAGCAGACTGTATTAGTATGCAGTTTACTATTTA CGAATTCCCCAGAAACCTCCAAGTGTAATAGCATACCGTCGCGAATCTAA ACATAGACATTGATTTTTATGTTTGACTGAAATTCAATCCCATCACCCTT TGCGTTTATTACGCTTGCACGCATATTACACTCAGTTACAATGAAAAAGT AATAACTTTCACGACTTTTGAATTAAGACGAAAAGGATTGTGGGATTGAA TTTCGGTCAAATGAGAGAAGTAATAATCATGACGTTTATACGACGAAGCG CTATTGAAATGAGTTTATTTCGAAAGAAATCTTTTATATGATGGTATAAT AGTAATTACTAAACTTTTAATTATTAAATGTTACTTTAATTGAATCGAAA TAATAGACAGACTTTATGTTATGAAGTCTATCACTGACTCTTTTTAAAAA GCATTGATCACATTTCTGAGTTTTGTTTTCAACGACGGGAATAAAAATAT CAACTTTGAGCTCAATCCAAGATCTTGGATTGTCGTCATGGTTACTTTTC TCTGCTTTGATTGTGTGCTGAATAGAATCTGGATTGGTCGGCACAGGTCG ATATATGATTTGGGCCTGTGCTTTTTCACGGTACCAATACATAAGGTTCT ATTTCTATGAATGATGCAACACCCCTGTATCACATATAACTTTGAATCTC CTTGACGATCATTGCTCCAGTATTGGTCCAAACTCCCCCTCCTCGCTTGG CTGCTCCTTAGCGCCTTTTGCTAAACTTTTTAGACCTTGGGACAATTTTT TTGGATTCTTCAACCAAAAAAGAGTATCTTATAATTCCGGTTTTTATAAA ACAATTAACATACGAGGAAATGATGTATAAAAGGGCATCGAGTGAGACTT ATAAAGGTAGAATAACATGAACTTTCGAAATGGTTGGTTGCAATGACATA TTTGAAAATACAAGTCATTTGAGATAGCCTCGATTTGATGTTCAATTTTG ATTGATATATTCTTTTGTTTCATAGTATGTTCAAGGAGGTGGCTGTACAA GTGTTGGTGTTGTTGGATTTACCATAGGAGGTGGTTATGGTAGCTTCTCA AAGATGTATGGAATGGCTGCCTCCAATCTTCTTCAAGCTACAGTTATCAC TGCTGATGGTAAAAAAGTAATAGCATCAAAATGTCAGAATTCAGATTTGT TTTATGCGTTACGTGGTGGTGGTTTTGGATTTGGTGTGGTGTCTTCATTG ACTTTTCGTACTTTTCCACTGCCTAAATCGTTTATTTCGACAGGTGAAAG TTATGTCTTGATAAAGGAATCGAGGTATCTGCCAGATTTCTTCTATCTTT TCTTCACCTTTTACGACTTAGACTTCAGTGGCTCAAAATGGGGAGACCAG TTGAGAATCCTTCCAACCCCATCTGCACTCTACCCAGATGCCTGGACGGT TCAGTTTAGAATGATGGCAACTAATCTAACACTCAATGAGGCCGAAGCAT CTTGGGATAGAATAAAAATTAATCTAGAAGGCTGGAAACGTCGAGCTTAT CCCGAGTGGAATATTAAACTTGAAGAAATCCCTGCCAAAGACTATTGGAC TTTAAACAATCCTGCTACTGTTCAATCGCCTTATAACTCAAAAGAACCTA ACCGTACATTTTATTGGGACGGAGATCATCGGGAAGTGTCCGAATATTGG CTGTTTGCTTTAAATAGTAGGTATCTTCGATTTGACCAGATTTCCACTCG TGACGATGCTAGACGATTGGCCAATTTCCTTGTCGAATTACCAAAGCTCC CTTCTTCCATCCCAGTTGCAATTCCTCTCAATAAAGGTCAATACAAAGCA AGCCAACATGCTCTTGACCAACTCAAAGATATGCCTTTCGCTTCAAATGT CAAAGAATCTATCGGATTAATTCTGGTTTCTTTTGGAGTTAGGTACTACA ACCCGAACATACCAAACAAGTTCCAGTATAACACATCTGATCTCAACTTA GTGAAGTCCTTATGTGGTACTGAGGATCTTCAGAACTGCAGTTCAATGGA AAGATTTAAAGAGGCGATGAATAATTTGCGCAAAGCAACACCGGGTGCTG GTTCATATTTCAATCAAGCTGATTACTTTGAGCCTGATTTCCAAACCAAT TTTTGGGGTAAAGAAGAATATACAAAGCTGTTAAAAATTAAGGAGAAATG GGATCCTAACGGTCTTTATTATTGTCATCATTGTGTTGGTAGTGAGCCAT GGAATGGAACGTGCTACAAAAAGCCCAAAAAAAATGTCGAGAGTGGAAGT GTCCCAAATAGCTTTGCAAGTGTCACCAAACTCATTATACTGATGCATTT GGTATTAGTCTATTTTTTTATGTGAGAAGTATTGACTAAACTATACTTAA GACCCATATTATAATCTTAGCATCTTTGATGGAAATTCAGGAAAAAAGGG GAGCACTAGATTAATCCTTCAGCAGTGTCTGATCAACACTGCTCTTCTAT TTTTCCATACTCTATTTTTCTGGTAAAGATGACAGGTGACTCATGGGTAG CAGGAAGTGCTAACTCTTTGGTACCATACCTGACTTCAGGCTCTGTCTTC ATCTTGCCGCAATTTTGATTGGATTTGTCGTTTTCTGTTTTCTTTTATTC ATTTTGATTGATTTTACTGGATATGTCTTTTAAAATGTTTTTATTTTTTA TTTTACGTTCTTTTAGATTATCATTTTTTCTCGAAATAGGTCTTTGATGT TCATTAGGTATTGACGCTATAGCAAGTCAATTTCAGTGACATTGACTTTC TTACATTTCCTATTGCCTCCGATCAGGGTAGGGAAAATAGAGTTGGTGGA TAAGGGTATGTGCGGACGGGACCTCCGAAAATTGACCCTTATTAGAGAGA CCGGAAATGTTTGGTGAAAAAATGCCCCTTATAGCTAGAGAAACTGTTTT GAAAAATTTTCTTCGATTTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072201TCONS_00072201Clytia hemisphaericatranscript
TCONS_00072200TCONS_00072200Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072201-proteinTCONS_00072201-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_71supercontigscaffold_71:943370..951991 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.02 0.12 0.25 0.12 0.05 0.09 0.08 0.25 0.25 0.12 0.2 9.32 7.6 29.51 42.09 4.61 4.1 12.2 9.39 0.27 0.29 0.07 0.14 0.04 0.1 0.05 0.1 0.02 0.03