XLOC_044765 (gene) - C. hemisphaerica

Overview
NameXLOC_044765
Unique NameXLOC_044765
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_70:180369..189607-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044765 ID=XLOC_044765|Name=XLOC_044765|organism=Clytia hemisphaerica|type=gene|length=9239bp|location=Sequence derived from alignment at scaffold_70:180369..189607- (Clytia hemisphaerica)
AGAACAGCATGGATTTCATCAGAAGCACATGGCCGACTTTAACTGGAGGA
AGGATTTGGTAGAAATTTCTTGATACAGATAGAACTGAGGATTAGTTAGT
AGTTACAGTCAAGTTGCTTGTCCATTTTTTTATTTACAATTATAAATATT
AAGATTTTTTTCTCTTTTATTTTTAGAAAAAACCTAGACCACAAAAATAA
TATCAAATGTCTTTTGCAAGAAGTTTATTCAGGTTTTCAAAGTCCTGTGG
GCAAGCTGTTGTTTGTTCAACCTCATCTAAGACTGTCATAAGAAAGCCAA
TACAAAATTTTGCACCCAATAATATATCCAGGTCTATTTTACAGTCAAGC
TGTAGATGTTTTCACACTGAAGGTAACAGAACAAAAAACCTTGCCTTGTA
GGGCCACATTTTTGCACCCAAAAAGGTGCGCATGCTACGTTCAAATCATT
GGGCTCCTCCTGAGAAAATCCAATATAATGGGGTGGACGACAGGAACTTT
AAGACTAAAAATGCACTTGGAACTCTAGCTAGTCAGATTTCTGTAATGCT
ATATATATACCTAAGTTCCGCTCCATTTTGTAGTCATATAACATATACTG
TACCAGACGTCCGCGCTCAATAGGATCGTTAAGTAATTCATCGATTACAT
ATCGATCCGTCATCAAGCCGTTCCGATGATCGACCCTATCGAGCGCGGAT
GTCTGGACTGTAACAAAATGTGTCAATTTTTTTTTTTTTTGAATTTCAAA
AAAATATTTCAATCTGCTGCCCCCTGTAATAGAAACTTTAACCCTAGGCT
GCATTTTTGTAAATCTTTGACAGTAGGAAGAAGGACCCTGCCGACGCACC
GGACTGTCCGGTGTATTTGTCCGGTGGCAAAAAGTATCCTTTCGCTACAC
CGGATGCAATAAGTCCAGTGTCAGAGTCCAGTGTCAGAGTCCGGTGTTGC
ATACAGGGAATTTTGGACGCCAGACATTTATGAAACAAAAAATTAAGAAA
CACCGGACCCACGCCGGACTTGTCATGTCCGGTGTTTTGATAGATTGTCC
GGTGGAAAAAAATATCCTTCTTCAACACCGGACATCTGACTTCTTTAAGT
CCGGTGTAGAGATTGTCCGGTGGTAAAAAAAATTCTCATTTTACACCGGA
CTTTCGCGTGTCCGGTGTTCGTTAAGTCCGGTGCGTCGGCAGGGTCCTTA
GGAAGACTATATGTATATGTAGACCTTTTCCAATGACAATGTCATGTTTA
AAAAAATTAATGAACACTAAAATAATCATGCATATCTTATCAAGTTATGA
CTTTTTTTAGGACTCAAAACTTTTTCATTAGAAAGAGAAACTGAGAGAAA
GGCTAAACTTAGATTTTGATGAGTCATTCGTTGAGTTTGGTCCGCAATAT
CAAAAGTCATGCTTGAATAAGAAAATCATTTCTATTATTAAATTCTTATT
GAACAGAGACAGTGAATTATTACCTTTCGCCCAAATAAAGTGTTTTATAA
ATTGCGACTAAAATTAGAAAATCTTGAAAATATCCAATTTATCCTGAAAT
TGGATCTAATTTTTGACCCCAAAATTTCGAGAGTGATGCTGATTGGGCTC
TTCCAGAAAAAAAATTGAATATGGGGAGTGGAAGATCTAACACTTTTTGG
AAATATACCTCCCCCCCCCCAGGACAAGCATAAATTGACCCCCGGGACAT
TCATAATTACCCTAATCAGAGCAATTTTGCCTGCTAAACAAGGCAAATTT
TGTAGATTTTTCACTAATTCTAACTTATTTCTTGCACACCTGGTATTGTT
AACCTGGCTTTAGGGTACTAAAATCTTTAGGCTTGAATTTAATTTGAGAG
ATTAAGATTATTCTAAACTTGTACTCAAAAAGTTTTTTGGTTTTGTTTTA
GGTGACGGAGACTTGGCAAACTTTTTAAAAGAAGAAATTGCTTATGAAGA
AGAAAATGTGACTGACGGGCCAGAATTGCATAATTTTACGGTATGATTAT
CGTACATTATTATCTGTAACAGTACTGTACGCACCTCTAAAAGTTTCCAG
AGTCTTACTTAAGTCTTATAGTTTGTGGTTTATACAATTAGGGTGAAGTT
TTCTTTTAGTCAACTTCCTGTAACCTCTATTGGGCTCTTCCAGAAAATGT
TCGTACATGAGGGGTGGAGGATATTTTGTCTGGGGGGTAGCAAAAAATCA
TCAAAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTCCGGGGGGGGGGGTAAATTTGCTCTGTCC
GGGGGTAATTTGGGTTGTCCGGGGGTCAACTGATGCTTGTCCGGGGACCA
AAAGTCACTTTGTTCAGGGGATAAATCACTGAAAATTGTTATATCCTCCA
CCCCCCATATTCTAGCTTTTTCTGGAAAAGCCCATTATGATTTTGCTTCT
AATTAAGAATTTGTCATGATAGACCGTTTGAAAAAAAAAATTTGAAATAG
ATCATTTTTCTTTTATACGTCATTTATAGACAATGAAATTGTATGACTTA
TATTTTTTAGGTGGATATCCAGGGTCCGAAAGTTAATTTGTCAAGAAACT
TCAATGGAGAAAGGTAAAAACTTCACCAAATTTTTATTTAATTCTTGAGA
AAGATAGAATGTGAGCTTAGCTATCTTAGCTATCTGGAGAAAGAATGTGG
TCTACATATCTGCATTACTTTGGTTATTGAATTTCCTAATAGAAAAGGTT
CACGAGTATATACACGTATTTTTTTTGTAAGAACATCCAAACATTTTGAA
ACCTCCAGATATTCTTAACTTTTTGAGTTTTTAAAGCCTAAAAATGTTTT
TATTTTCATCAATGAGTGAGTGTTTTTATCCATTCTCCTAAGAAATTGGG
TGTTTTAGGGTCAACAAAGCCTTAAATGTTCTTAACTTATTCTCAATATT
TTGACCATTGAAGTCTTATGTTCTTATATAGTTTGTTCTTATAAAAGAAG
AAACGTGTACCTTAACCCTTTCCGGACGCATGATTTCACGGTTATATGAC
GCAAACAAAAATTTGATTTTTGACTGGCTTCACTAAAATTGCAATAGAAA
GTGATCGATAAAAGATATCACGATAAGTAATACCTTGTTTTTTTCACATG
TAATAAGGGTTTTGAAATACCAAAAAAAAATTTTTAAATATGGCTGACAC
CTGGTCACGTGACCTAAAAATCGGCAGATTTTTTTTCGGAAAGGGAAGAT
TTTTGACTTTGAATAAAGAAATAGAGCTAAAGGCATTTACTTTACGCCTT
GAACTTTGAATATGATTTAGAGATTTGAATTACTGGCCGGGTAAAAAAAA
TTTCATGTCAAAAGCTTTCCAAGAATCTGAGTAAAGTGATTTTTTGTCCA
AATTTTTGAGCAATTTTTCCCTTACAGATTTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TGAGTAAATTTACAACAAACATTGAAAATTTATAATTCTAGTTGTAAACA
AGATATCGAAAAGCGGTTTTTTGCAGGTTACGGGAAATTTATGTCAAAAT
CATTATTCAAAACCATGTTATTGTATTTTGGCGCGAAAACTGTTAAAATC
TTTTACAAAGCTATCCCGTGCGTCATATAGGAACACGATTCATGGGCCAC
CCAGTGGCCCGTGCGTCCGGAAAGGGTTAAGGGAAGAAATTTTCGTGGAA
TTTAATTTTGTGGTTGAGAAGAATTTTTGTTTAAAAAATATGGCTCATTT
TGCCCCAAAAACACCAATCAATTCTATAGGTGATTTTTTAATCATGAGAA
TATTCTTGTTTCGCGGATTTGTCAAAAAACTGCGAAATTAAATTCCGCAA
AAATTTGTTCCCTTAAGGTACCTGTTTTTTTTAATTTCATGCAGAGTTGA
CGTCGTTTTCAATATCAATGAGAACGAGAATGTGGATGAAGGATTGAACA
TTGAAGAATCGGAATACAGTCAAGACCAAGATGATGTCTCTCTACCAGAG
GTATAATATAACTCAATTTGAGTCAAAAATGATATACTGCACGTAAGCAC
GAAATAATATATATAATATCCTACTCAGCGAGGAGGTAAAGCCATTTCAA
TCTTTTTCCAAGCAACTCTATTTTGCCAGATGTTGAACATGGCCGTCCAA
CTTTAGTGAAAGGTCCAAAAGAGGCTTAAAATTGACTCTTTTCAGTACAG
AAGAAATAAAACAAAGCTTTAAAAGCTAATTAGGGCGAAAGAAATTACCC
TTATGGTACATTTTTTGAAAATGTTATTTTAAGTTAAGAATGGCCAGAAA
TTTTGCCCAAAAAGATACGATGAATTACGATGATGTTTTCAAAATTTCGC
TACTACTTTTTACAGTCACTACATAACCCCCTAAATATAAGTCACACGTG
CCCTACTTTATTTTTCTGAATAAGGTACAACTGCTTTATCAATGCAGGCC
TTTACGAATTCATGTAAACTCATACTCATACTCATCAGAGACCCAAAAGA
CTTGGTTCTTCTAGAAATCAAGAATTGTTACATTTAAGTGAACTTATTTT
GGCTAATTTGGCAAGTTTAGTCAAAGTTGTCGTTAATTTTCTTTCTTTTT
TTTCGTTTTCCAAAATAACCCCTAAAATTCATCAAAAGGTCATTTCTCGC
CCAAATTGGGCTCTTCCAGAAAATGTTCGTACACCCCGGGTGGAGGATAT
ATTGTCCGGGGGGTAGCAAAAATTCGTCAAAATTTACCTTGTCCGGGGGG
TAATTTTGCTCTGTCCGGGGGTAATTTCGGGTGTCCAGGGGGTCAGCTGA
TGCTTGTCCGGGGGGTGAAACCCGTTGTCCAGGGGGTTAAAAGTCACTTT
GTCCGGGGGGTAAATTTGCTCTGTCCGGGGGTAATTTCGGGTGTCCAGGG
GGTCAGCTGATGCTTGTCCGGGGGGTGAAACCCGTTGTCCAGGGGGTTAA
AAGTCACTTTGTCCGGGGGGTAAATCACTGAAAATTGTTATATCCTCCAC
CCCCCGTATACAAGTTTTTTCTGGAAGAGCCCATTGAAAAGTTTAACCGT
TCGCCTAAATAAGTTCTCGCCAAAATTATCTCCCCTTCGTGTAACAACAT
TATTCATAAAAAAGTTTTAAATTCATGATATGCACCATTGCAATGTCTTC
CACGGACCCAACAGCTGATTGGTTGAAAGTGCAGTAGGTTGCCCCCCCCC
CCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNGCATTTGGTAATGAGTGAATCTATTCTGTTCTAAA
ATTATGTACTAATAATAACTTCTCCTAGTTTTCGCACATCAATTATATTC
AGATAATATTGATTCAGATTGATTTTGCTTGAAGATATTTGTTATGTATT
GTCTTGCAAAAGCAACGGATAATATTTACTTGATCCGTAAAAAATGTCGG
CCGTTCTTTTCAATTCTTTTTCGACATTTTTAACGTCGAAGCGTTCTCTA
TTGTTCTGCTTGGATGATTTGTTAAGATTCGTTTACTAGAATGTTACGTT
GAGATTCCCTCCAGATCGATACAATCCACACTTTTATGTTATCAATATCA
ATATGTCTTATACATACTCAACTTCCCAACCATTTATTGTGGTTTACTAC
CAAAATTGGGACTCCAGTGCAGTATTCTCTGAATTGGGTTAAACTTATTC
CCACAGTTAGACAAGTGAGAGTTAGACTTGCGTAACCTTTCTGCATCTTT
ACCAAATATTACCAAGACTACATACAGTACTATGAAAAGAAGTGAGATTT
GATGAAATTGCTAACGCATTAGGCTCTTCCAAAACATGTTCGTACATGGG
GGTGGGAGTGAGGATATATTGTCCGGTGGGTAGTGAATAAATTGTCCGGG
GGAGTAAATGCGCTCTGTATCGGAGTGATTTTGAATGTCCGGGGTTCGAC
TGATGCTAGTCCGGGCGGTTAGACTCAGTTGTCCAGGCAGGGGGGTAAAT
GTTACAACGCTAGGGGGTAAATTTTCTAAAATGTTATACCCTCCACCTCT
AATATTCTTTTTTTTCTGGAAGAGCCCATTAGGATCTCTAAAAGTTTGTT
TTTTTCATCGTCTTCAGGAACTGTACAGTATGTTAATGACGACATTACTG
GAGCGTGGAATTACCGGAGCTTTCGTGAACGACCTCCTGGATTTCAGTAC
GGCCTCAGAACACAAACAGTACGTCAAATTTCTTAAGGAATTACAGGTAT
TCGCAAAAGAAAAATGAAAATATCACATGGAAACTTTTCTATTTTTTATA
TATTTCTTATTCGCTTTGTAGATATAGAAGTTTATAGTAGTGCATCATAT
TTTTTCTTGGCAAATAAATAGTTAAATTTACAATTTACAATATTTTAGTG
CACTTATATAATATTTGTGTCTTAACCTCAATTTCGAAAATAACCCCTAA
ATTTTTACTGAAACGTTCATTTTTAGGCCATGTCATTCACAAAAACGTTT
GGTATCGTTAATGCGGAAATTTTTCCCTTAATTTGTGTTTAAAAATTCGT
CCAAGAAAGTGAAGAAGAAAATAATGAACTTCTTGTAGAATAGCGCTATA
ATTACCATTTTTACAAGAATGAAACTTCAATCTTAGATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00072078TCONS_00072078Clytia hemisphaericatranscript
TCONS_00072077TCONS_00072077Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00072077-proteinTCONS_00072077-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_70supercontigscaffold_70:180369..189607 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
118.3	113.08	38.29	26.51	28.95	24.84	31.39	37.26	24.79	29.76	15	13.47	17.45	17.13	21.31	23.12	50.2	46.52	2.04	6	31.54	32.47	70.76	65.28	15.77	18.28	21.82	14.27	42.12	43.14