XLOC_044670 (gene) - C. hemisphaerica

Overview
NameXLOC_044670
Unique NameXLOC_044670
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_65:176209..186367-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044670 ID=XLOC_044670|Name=XLOC_044670|organism=Clytia hemisphaerica|type=gene|length=10159bp|location=Sequence derived from alignment at scaffold_65:176209..186367- (Clytia hemisphaerica)
GGAAAAGAAGAATTCGGCTTATTCCTGAAAATATTACGAGCTTGAAGAAG
GAAAGTTTGACGTAAGTAGTTTCTTTTCCAAACATGTGTGAAATGGAGGG
AGACGTCCCTGACACCCTGGTTGAAAAAATTTATTTTTGTTCCAAATGTA
CTTGAAAATGTAAGTAAATTGAAAAACCAAATTCGAGAGCTCGAGGCTAA
ACTGTACGTTTATTCAATGTTCGTTCATTAATCCTTAGCTTAATTTAAAG
TGGCTGTAAAAATGAGAGCCATTATTTTTTAGTAAAAAAAGTTTCCCTAC
AAGACCAAATTCTATTATCCTAACTAATTGAAGCAATTATCTTTTCATCC
TTTCATTAACATTGGGCATAAAATTTCCCATTCTCGTTACAAAATCTAAA
AACTTCAAAAATCAATATAATATGCAGCAAAAGTAGAATATACCACAAAA
GACATGACAAAGTGTTGGAATAAAATTAATATAAGATAAGGAAAATCTGA
CCTTTTTACTGACTTCCTGACAGTTCCAGACTTTCTAAATTTTTTGAGTC
AGTTAGGCGGTCATCGAATAAATGCTCTGTTCCCGTCGCAACGGGTGTAA
AAAATGCAAACGGGCGGACGGCTGGTCAAAAACATTCCTGGGTTTTTTTA
ATCACGCCAGTAACTCAGGGGCGGGTGGTAATGCGAGCAAAACAATTTTT
CGATGGTCGTCAGAGCAATAGAGAAAAAAGATATACTTTAAAAGAACAAA
TTGCTTTTCCCAGATTTTTTTCCCCATCTTCGCACTGGAAAATCAGCGGA
AAATTTGATGCGGGCGGGTGACGTGAATAGAACAATTTTTCAATGACCGC
CTTAGGTAACCCGAAAGGAAAATATTTGTGATTGCCGCCTGAAAAACAAG
TACACAACTAAAGAATAAGACTTAATGTTCCAATTGAACCAGATTGAACT
TAATCTGCCTTACAAACTCTAAAATTAGCAACCTTACAATTTCAAAAGAT
TAAAACAAATGATTTCTATCTACCTAAGTAAGGCCACAATCACAAATAAC
TTGTGTTCGCATCGTTTTTGGGTAAAGTCAAATCAAATCTATCAGAAATT
TGGAATAAACGGCCCGTATTACTGTGTTTATATGTACTGGTGGTTTGCGA
CTTCCCAACTCAAAATAATCAGAAAATTAAAAAAATTCATCAGTCGGTCA
GACGACGCGAACACAAGTTATTTGCGATTGTGGACTAAAGGAAAAATAAA
TAAAAATTTATGGCAAGTTACACGCAGAATTATTTCTTAAGCTTTGTCTA
TATTTTTTAAGTTTGTTTGTAATTGCTCTTTCAACGTGTCGTTGTAGGGG
TTCTGAAATGTTAAATCTTTCAAATGTTGCTTGGAGGATGGCTTTCATTT
TAGAGGTTTCAAACTTTTGGTAACCTTGTCTGCCGTTTATGTTGCACCTC
ATAATCTCGCCGGTGTTAAACANCATTTATTTTTGTTTAGATTTTGATTT
TCATTTTGTATTTACTTTTTAGTTTTGAATCATCTTTGATTACAAATATG
TGCTGCGATAAAGGAAAAGTGTGACTCATTTATTGGTGGACACCCTTCTG
TTATATTCAAAACAGTAACCATTCAAAGGTTCAACACTGGCATTCAAAAC
AGTGGACACACTCAAACCAAAAAAGATGTCAATCATCATTGAGGAAATAG
TGTAAACTACAACAAATCAATCAAAGAAATCAAANATCATGTTGTTGGTC
GTGGTCAATTTGCTCAAAATTCAAGGGTGGTATCCAATCATTGTTGTTGT
CATTTAAGATAGGGTCGTATTGGTTGTTGTTGTTAACTTGATTGTTGGTG
AGTTGGTTGTTGTCGTTGAGTTGGCTATTGTTGTTGAGTTGGTTATTGCT
GTTGAATTGGTTGTTGTGGCAGAGTTGGTTGTTGACTTGNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAACTA
AAAATCATATTCCCTCAAGCCTACGAAGAACAATTTTCAAATCAATACCA
TCAAACTCTGTTAGCTTTCAAGAAGTTTGAAGAACGCTTAGCATCTAGAC
TAGTAGTACTGGGCAAGAAAGAACAACAACAACAAGAAAGAGCTGAACTA
CTAATGAGATTCAGGCGCAAAAGAGATCTAACTGAATCAACCGACAACTT
CCATACACCAACCGACAACTTCCAAACTTCAACCGACATTTTCCAGACTT
CAACCGACATTTTCCAAACTTCAACCGACAACTTCCAAACTTCAACCGAC
AACTTCCAAACTTCAACCGACAACTTCCAAACTTCAACCGACAACTTCCA
AACTTCAAATGACAACTTCCAAACTTCAACCGACAACTTCCAAACTTCAA
CCGACAACTTCCAAACTTCAACTGACAACTTCCAAACTTCAACTGACAAC
CTCCAAACTTCAACCGACAACCTCCAAACTTCAACCGACAACTTCCAAAC
CTCAACTGACAACTTCCAAACTTCAACCGACAACTTCCAAACTTCAACCG
ACAACTTCCAAACTTCAAATGACAACTTCCAAACTTCAACCGACAACTTC
CAAACTTCAACCGACAACTTCCAAACTTCAACCGACAACTTCCAAACTTC
AACCGACAACTTCCAAACCTCAACTGACAACCTCCAAACTTCAACCGACA
ACTTCCAAACTTCAACTGGCAACTTCCAAATCTCAACCAAGTACCTACAA
AATTCAACCATTAATTCTCATATCTCAAATGCCAACAACATCAGATTCTT
GTTTGTCAATCTCAAAAAGCAATTCCACTTACTGGAAACATCTCATCCAA
TCGAAATACTCAAAACACCTCAACCTATCGAAATACTTGAAACATCTCAA
CAAATCAACTTGCTCAAAGCACCTCATTTAATCGACTTGATCGAATCACC
TCAATCAATCGAATCGTTTGAATTGTCTCACTCGTTCGAATCGTCTCACT
CAATCGAATCGTTCGAATCGTCTCACTCAATCGAATCGCTTGAATCGTCT
CACTCAATCGAATTGCTTGAATCGTCTCACTCAATCGAATTGTTCGAATC
GTCTCACTCAATCGAATCGTCCGAATCGTCTCACTCAATCGAATCGTCCG
AATCGTCTCACTCAATCGAATCGTTTGAATCATCTCACTCAATCGAATTG
TTCGAATCGTTTCACTCAATCGAATCGTCCGAATCGTCTCACTCAATCGA
ATCGTCCGAATCGTCTCACTCAGTCGAATCGCTCGAATCGTCTCACTCAA
TAGAATCGCTCGAATCGTCTCACTCAATAGAATTGCTCGAATCGTCTCAC
TCAATAGAATCGCTCGAATCGTCTCACTCAATCGAATTGTTCGAATCGTC
TCACTCAATCGAATTGTTCGAATCGTCTCACTCAATCGAATCGTTCGAAT
CGTCTCACTCAATCGAATCGTCCGAATCATCTCACTCAATCGAATCGTTT
GACTCGTCTCACTCAATCGAATCTTTTGACTCGTCTCACTCAANCTCACT
CAATCGAATTGTTTGAGTCGTCTCACTCAATCAAATCGTTCGAATCGTCT
CACTCAATCGAAACGCTCAAATCGCTCGAATCGTCTCACTCAATTGAATC
ACTCAAATTGTTTCAATCAAGAGTTGACTTGCTTGCATTGTATCAATCAA
ATGGCTTGTTTGCATCTTATCAGTCAAATGGCTTGTTAGAGATTGTTTGT
TTTATTTCAGTCTGTTGCTCTTTGGTTCTTGTTGTTATTGAAAGATTATT
GCTTTTCAAATTATTATTTATTCGCCTTATATGGGAAAGGTGGAAATTTA
TTCATTCAAAACTTAGCTTTGGCACAAGCTAGAACGTTTTAACTCATTCA
AAACAATTGAAATTTTGCATCTGCTGTCTGTGCAGTGTTGCATGAGCAAA
ATTGACTCTCAAGACTACAAAATTTCNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
AAATTAAAAAAATTCATCAGTCGGTCAGACGACGCGAACACAAGTTATTT
GCGATTGTGGACTAAAGGAAAAATAAATAAAAATTTATGGCAAGTTACAC
GCAGAATTATTTCTTAAGCTTTGTCTATATTTTTTAAGTTTGTTTGTAAT
TGCTCTTTCAACGTGTTTTTGTAGGGGTTTTGAAATGTTAAATCTTTCAA
ATGTTGCTTGGAGGATGGCTTTCATTTTAGAGGTTTCAAACTTTTGGTAA
CCTTGTCTGCCGTTTATGTTGCACCTCATAATCTCGCCGGTGTTAAACAA
CCGCTTAATTTCTTCCAAACCATACTCTGCTGCAAGCTTAATTCGTCTTT
CATCTGAATCTAACGAGTTTATTGAGTTTGAAAGTTGGTGAGCGATGATT
TGAATGTGCTGCTGTTCTTGGATCTCAACATCATGTTGTTGGTCGTGGTC
AATTTGCTCAAAATTCAAGGGTGGTATCCAATCATTGTTGTTGTCATTTA
AGATAGGGTCGTATTGGTTGTTGTTGTTAACTTGATTGTTGGTGAGTTGG
TTGTTGTCGTTGAGTTGGCTATTGTTGTTAAGTTGGTTATTGCTGTTGAA
TTGGTTGTTGTGGCGGAGTTGGTTGTTGACTTGGCTATTAAGGAGTGATA
AGTTTTGGTCTATGAGATGGAGTTTCTTATTAAATCTCATCAAAGCAGCC
TTTCATCCAATCTTTCAAAATAGTCATAGAACAATTACAAATTGGACTAG
TATTTTGTAATGCTGTCCGTGTGGCTACCTGCTGACCTGAAAGGTTAGGT
GTTGACATTGCATCAAATGCTGGCACTTCAATCGCTCCTGGCAAGGACCA
ATTATGCTCAATCGAAGTATTTGATTGTTGTATCTTATGGAGCCTACTAT
TTGATGAATTAAAACCTGGCGGGGGTGTTAAAATTGTCTCTGTTGGGTGT
CTGGTGGGTTCTGGAGTTGGTGGCTTGATGGGTTCTGGAGTCGGTGGCTT
GATGGGTTCTGGAGTCGATGGCTTGGTGGGCTCTGGAGTTGGTGGCTTGA
TGGGCTCTGGAGTTGGCGGCTTGAAGGGCTCTGGAGTTGGTGGCTTGGTG
GGCTCTGGAGTTGGCGGCTTGGTGGGCTCTGGAGTTGGCGGCTTGGTGGG
TTCTGGAGTTGGTGGCTTGATGGGTTCTGGAGTTGGTGGCTTGATGGGTT
CTGGAGTTGGTGGCTTGGTGGGCTCTGGAGTTGGTGGCTTGGTGGGCTCT
GGAGTTGATGGCTTGGTGGGCTCTGGAGTTGGTGGTTTGTTGGGCTCCGG
AGTTGGTGGCTTGGTGGGCTCTGGAGTTGGTGGCTTGGTGGGATCCGGAG
TTGGTGGTTTGGTGGGATCCGGAGTTGGTGGCTTGGTGGGCTCTGGAGTT
GGTGCTTTTTCGGTAGGCATTACGGCTATTTGCTTGGTTGATGGTTGTTC
AGCTGATTGAGTTTGATATGCTTGCTGTTCTTGACGAGAAGGTGGTTTCT
TCAAAAAGTTTCAGGGTTCCAAGCAATCGTTCTTTTTGAGTGCATGTAGT
TGACTCGTTTGATCAAGAACCCATTAACTTCTTTCATCTTTGCCTCTTTC
CGTTGCTCAAACTGTCTGATTGACTCTTTTTCACTTGAGCCCATTTCACG
AGACTAAAATTGAAAATTATGTAAAATAGATTATTTTTGATTGCTTAAAT
CGTAGAAGTTTAAAAAAAAACGCGCCGAATTGACAGATCGCGTCGAATTG
ACAGATCGCGCGAAATTTTTCGAAAAGCTGATTCACTAAAATAAATCCAG
TATGTTTTTTCTTTCACTTTTTATCATTTTGTTATCATTTTCATAATTTT
TTCAAAAACTAGTAATGGGGGCGTAAATTTCCATGTTATTCTGTTCTTAG
TCAAGAATTGTGTTACAAACATGTGACTAAATTGATTTTTGTATTAAAAA
ACATTATTTTTTTCTTCAAAATGATTGCCCTCGCTAAAATTAATCCACGC
GAAATTTTTGTCAGATGAGTATTGGCCAAAAACCTTCATTTTCCTAGGCC
AAAAGCACTTAATTATGATCCCCCCCCCATTTTGTTGATTTTTACCTGGA
ATACCCACGTCCCCCGACCCACCTCTACAATTAAACACAAATTTTTTTAT
TCTCTTTCAATCGAAAAAATAATTTTTCTTCTTGTTTTTCTATTTTTAGG
TAAATTGGAAAGTCTACAAACATGTTTGAAATCAAAACGCTTGCAGAAAA
TAATCAACTACTACGTTTCTATCACATTTGAATTAAAAGACAAGTGTCGT
AAGTCCTTATTTACCTTAAGGAATTATCTTACCTTGCGGTTAGGGGCATT
TTTGGTCCGAATTATATAGTAGGGGGAAATTTGTAAAATCGCTTGATTTT
TTTAGTCAAAGCACTCGTTATACATTTTTGGAAAGCTAAGGGTTAGGGGA
ATCAAAATAACTTGGGTGCCAATTTTTTTTCGGACCATTTGGTGTGATTT
TCGGACAAATACAACGGTCTCAGCCAAAAATCATAGGGTGAAAACAAAAC
TGCTGTTTCTGGCTGAAAAACACTGTTTTAAGGATTAATATCTCGAGATA
GGTAAAGAAATCACCTATGCTCGCAATATATCACTACCTTAAGGGAAGAA
ATTAAGTTCCCGCGAAATTAAGTTCCTGCGAAATTTTACAAAATCGTCAA
ACCGCAAAATTTAATTTATTTCACGCATTCCCCCAAATTCATTTCAAGCC
TTAAAAGCAGGTTTTTTGCTTATTTAATAACGCTTTTGGCCAAAAATATC
TTGCAACCGCAAAATTAAATTCCCGCGAATTTTTCGAAAATCGATGAGCC
GGCGAAATTAAATTCCCGCGANACCGCAAAATTAAATTCCCGCGAATTTT
TCGAAAATCGATGAGCCGGCGAAATTGAATTCCCGCGAAAAAAATAATTT
GACCAACCGCGAAATTGAATTCCCCCGAAAATTTCTTCCCTTAAGGTAAT
CTTAATTTTTTGAGAGCTTTCCAAATATATATAACAGATCTCCGTTTTCT
CAAGCTAAAATTCTCATTAATTTTTCGACCTATGATTTTTGCCTGAGACC
GTCGTATTTGTCCGAAAATCACACCAAAGTGTCCGAAAAAAAATTGCCAC
CCAAGTTATTTTGATTCCCCTACCCCTTAGCTTTCCAAAAATGTATAACA
GGTGCTTTGACTAAAAAAATCGAGCGACCTAAAAAACGAACAAATTTCCC
CCTACTGATAGGCTCATATCGCCTTAATAAAGTGTCCTTTAAATTCATAG
CTCACCCCCAAATCAAACTTTTGTGGGACTCTATACTACTATTGTAGTCA
CCTGCCAAATCAAATTTCTGCCAAAATTTAAATATTTCTTGGTCTTGTTT
TTTCCTTTGAGCTGTATCCCTGGTAATTTTTAGTGAGATTACANTCTTGT
TTTTTCCTTTGAGCTGTTTCCCTGGTAATTTTTAGTGAGATTACATTTTG
TATTAATTATTTGTTGTTTTAATCATTTCAGGTTAATCCACGAGAAAATG
TCTATGTTCAATGAATCAAAATTTTGGTAATGGATTTAATAGTAAGTAGT
TTTACCGGTTCTGGTCCACTGCTATCTTTTTGGGAATCTTTCGACCTGGC
TGATTTTGCTTTCTTGAGCTTTCCAGCAGTGTTGGTGTTTTCTGTGATTG
TGGTTTTTGACTTTTTAGCTGATTTCCGAGGCTGAGAAGATTTTGATTGG
GTTTTTGACTTTGAGATTGTTGATGATTTTTCGGTTGTCGGTTTTTGGCT
TGTTGGTGGTTTTTCGGTTGTTGTTTTCAAGGTTGTTGGTGGTTTTTCAG
ATGTCGCTTTCAAGGTTGTTGGTGGTTTTTCAGATGTCGCTTTCAAGGTT
GTTGGTGGTTTTTCAGATATTGGTTTCGGGCTTGCTGGTGGTTTTCCGCT
CTTTGACTTTGTTTCCTCGACATACGTTTTACGCTTTTGTTGAGTCTAAA
AAGAAAATTTATAATTCTTGCTACATGTTTTTATAAGCATAGGGTAAATT
TTAAGGAGTTTGTAAACGGAGGCTCGGTATGCTTAAAAGCTTCATTCTGT
ATGCTTATAAAAAATGTGTCAATTAATTGTTTGGTGAACAATTTGATACG
TAAAGTGCTCAATGCCAGAGAAAATAAAAAAAAATCGTATAAAAAACGTG
TAAGCCGTAAGCAGGGGGGGGGGTCGGTAGTAAAATCTCAGACATAATGA
CGTTTACTACGGTGGTGGTGTGACGAAAGATTGAGAAGAATAATTTACTA
CCCAGGGTAGTTAAAACTGGTAAAATTTGCAAATTTTAGCTATTTTTGTA
ATTCTTTTAATTTTTTGGATGACTTTTCTGAAAAAATCTGAAAATTTTTA
TAACTTGAAAAAATATTCTGTTGGAAAGTTGTTTGCTGCAAACAAAAATT
TCTGAAGTTAGGTGACGGAATTTATATTGCTTTTTCAGGCACATCAACGC
AAGTGAAGATTAAAATGGACTCCGATTGTCTCGTCCAACGCAAAGAAGTT
TGAGTGGAAGTAAATTCAAATCAGATTTGTTATATCAAGTCCATCCAACC
ACCACAAGAACATTTAAACACTATTTTGAAATATATACCTTTGCTGCGTC
TGTATTCTCCCATTTTCTTTCAAAATCGTCCAATTCTTTTTTCGTGGCTA
AAAAGAAAAAGAAAAAGAAAAATGTTAAATTTCAAATACCCTCATTCGTA
ATAAAATTTTCTTAAAATTGTATTTGGGGGTGGAGGAAAATAACAATTTT
CAATGATTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071950TCONS_00071950Clytia hemisphaericatranscript
TCONS_00071949TCONS_00071949Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_65supercontigscaffold_65:176209..186367 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.66	0.66	0.65	1.27	1.94	2.86	4.81	4.62	4.85	4.3	5.93	6.19	5.99	5.1	23.7	25.3	22.53	26.19	33.09	19.31	29.48	27.13	12.09	8.6	0	0.22	14.2	12.49	10.75	9.11