XLOC_044656 (gene) - C. hemisphaerica

Overview
NameXLOC_044656
Unique NameXLOC_044656
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_65:93684..98886+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044656 ID=XLOC_044656|Name=XLOC_044656|organism=Clytia hemisphaerica|type=gene|length=5203bp|location=Sequence derived from alignment at scaffold_65:93684..98886+ (Clytia hemisphaerica)
tCTAGATGAAAGAAAATGTAGAAATaataaaaacgaagaaaaacgAAAGA GCATTAAACTTGTCTTCTGCGAACAGATGGTatcttaaatcaaaacaaaa tgaaaagaataacAAAGATAGAAAACCGTGGAGGAAGAACAGTCCAAAGC CACAACCTATAGTCTTTCATCAACAGAATCTATTGAAGAATGCACAAAAC GAAGGTATGTACCTTGCTTAATAGCTAGAACATCATCGATGATTtgaaat accttattacacgaatattactagtcattttattaacacgaattgaaaaa tttcgtgttaataaaaacccccttaattaaaaccagccgttgTATCCttg aaaaaacaaataaaattcgtgttaattttttccgtgttaatttcaaggcc gttgaatacttgcctagtaatattcgtaactcaattttcgaaaaattgaa atacggCTTTCTTGCTTTTATAAGGGTATGCATATcctcaaatttaaatt ttgcagGTTATTTACACGATTTGACGGAAGAAGTTCTCCTTGAGAACTCA GAAAATGTCCACAACAAACGTTCAACCTACCCTGGTGACGTTGTCTATCT CTCAGCTGCTTCACAACACCTGCAACAGGTTTCCTTACTGGATTTATGCG AACAATTGGAGATTTGTGATCTGAGTAATAATTTCATTGATGACATCGGA GCGTTGAGGTGGTGTCACAATCTGTTCTTTCTAGATGTACATTCAAATCA GGTAATCAGGTTGCGTAGATGTTTTAACGTTTAGTATGTTTTGTACAACA ACTTAGCAAAATTGTCCCTGACGAGCCCTGTTGAAAGGCCTATACATGAC GCTTCCATTTTGTGCTCTTCCAAATTGTTGTTATCGAAGAAAGCTTcaat ttgtaaattttaatttttcagtttttcaaaaatcgttatCATGAATTTTC AGATATCGCTATAAATGTCGTAGAAATTAGATTTGAAGGGACCATATTGT TGTCAAtggtggtaaaacattttcctaGTCGCTAGATTTTAGTATTAATA ATGAAATATTTAGTTATCATACTTCAACATATTCAAAGCTTCTTGTCTGT TTTCAGCTGTCAAGTTTGCCAGGTAAAAAGTTCTGGTCCTCTTTACCCAA ACTATCATTGGTTTACCTTCACGACAATGCTTTTTCACGTTTGGAGGAGA TCAAATATCTTTCTCATTCTCCATCGCTGAGTTCTTTGACACTTTACGAT TCANTTCCATTTTGTGCTCTTCCAAATTGTTGTTATCGAAGAAAGCTTca atttgtaaattttaatttttcagtttttcaaaaatcgttatCATGAATTT TCAGATATCGCTACATAGACATATGATAGTCTATCATATGTCTATGATCG CTATAAATGTTGTAGAAATTAGATTTGAAGGGACCATATTGTAGTCAATT AtagtggtaaaacattttcctaGTCGCTAGATTTTAGTATTAATAATGAA ATATTTAGTTATCATACTTCAACATATTCAAAGCTTCTTGTCTGTTTTCA GCTGTCAAGTTTGCCAGGTAAAAAGTTCTGGTCCTCTTTACCCAAACTAT CATTGGTTTACCTTCACGACAATGCTTTTTCACGTTTGGAGGAGATCAAA TATCTTTCTCATTCTCCATCGCTGAGTTCTTTGACACTTTACGATTCACC AGTCAGTTTGAAGAAGAATTACCGCCACTGTGTGGTAAATGCAGTATGGA CGTTGAAGGCTTTGGATGGTCATGTTGTCTCTGATGAAGAGATTATCGAA GATGCAGACTTCACTGAGAATTTCAAACCACTCAAAAAACAATTTCGTTA CCAATCTCCTTTCTGTTCGAAGGTATGTCTCAGGTTTTGTAtttattaga ctttttcttaGATGCGACACGAGAAAGGACTTTTAGTATCGTATTTCCTC TAGTTAAGATTTTGAATCAACAAtctgaaagattttttaaatgatctCTG CGGCACTTATTTAAGGAAATATTAATTGTCAAAGGCATTGAAAATCTCag acaaaatgttttttggacctacctggaggtcctataaatttaccttcgtt cgttcgttcgttcgttcgttcgtccgttcgtctgttcgttttTTCCTAAA TTTGCACAGAGATGCAAAGTTTTTTTCCGGCCCAAAAtactggaaatatg ccggaaatcgccgtttttgcagatttttgttggattttttcctaatcttt ctttgttttttttttcacttacatttttgataacaatgcccaccatcaag catgattcagtTGTCTGATTTTGGAAGCtggaaatttctaaaaatcgccg gaacagctgAGAATCGccgaaaaaacggtttttcttggatttttcgaact gcattttatatttttcatgaatttttgcaCACAAATGTGTTAACAATGAT AATGCCCGATGACATTTAgcgtttttgattttcaattgaaCTAATTATTC TAGTATCTAGTAAACCGTTCGCTTGTTCGTTCTTTTTTCACGATCTTTTC CATTATCGCTTTAAACTACAGTCGACTTTCATAACTGGAGCCTTCTCAAC TCGATTATATCTCCAACTGGAACGATTTTTCTGGTCCCTAGAGGAAATTC TTAGGCTATTctacctctataactcgaatttccGTAACTCAAACGATTAC TGATTATCTCCTCGGCGTTCCGGCACTCGACTATATTACACTTCCCTACT TGCTCTAACTTTAATCATTAGGTAGTTCTAATTAGCGTTCCGGCTTGTTT GGGATGGAAACTATCGCGTACTTTAGCAGCTTCAGAGAACATGACAACTT TGAACCACTTTTAAACATGCAACATTCTTGTTCATtcctttctttttcat tcaagAAACCAAAGGAGAGAAGGCGGCCAACACACAACGAGTTCAAACTT TTGATCAAAGAAGAACTGAGCAAAATCAATACAATTCAATCGAAGTACTG TCCAGTTTTGATCCTTCAGAGGTGTATCAGAGGTTTCTTAGTAAGACTCA AGTACAATTACATCAAGGATACAAGACTGtggtatgtttttcttttcaat aaaatttcctGTAATGTTTTATGAATCAGTTAGTTGTTCACCTCAAATAT GACCTTCTACTTGTAGGGATAGAGAAGGTATTCAATGATGAGCAACATGG GTTTGAGGAAATTGGAGAGCaagctttgattttttctttctctttttctc ttttttgggtTTGACCTCAATTTCGTACTGAGTTCGATTTTGATTAGAAA AATTGTTGTAATGTAATTACCTTTTTAAAACGGAATTCTCTATTTCGTAA AGGGCTGCTGTTTCTATACAACGTTTTTATCGAGATCGCAAAGGTTATCC GCGACCACCGCCAACCTCTCCCAACCTTCAATTCCAAGACCATTTGTATC AAAGTTTCTCCTCTATGCGACTGGACTATGAAACCTACCTTCGTCTGCGG CGCTCAAAACACGCCAAAAGTAGCGCCTCTTTCAAGTCCTTGCATTATCG ATTACCGCATGCTGAAAGCCATGATGCCCGGGTGCATGGCACCTGCTTAC GCTCCGGACTACCGCGTCCCATTCATCGACATATCAGTGTGGATTTACAG AAGCTTGAAGGACAAACGACTCAGATCTTAAATAGAGCATCAAAGCTTTC TGGTTCCAAACATAATCACCGAATCACAGTATCGGACCGTTTGCAAGACT CAGTCATCACTCGCCAAACAGGACAAATACCAACTGCTAGTCGTGCTCAG AGATCTGCTCATCTACCAAGGAAAACACCGGATAATTTGGAACAAATTGC TGAAGATTTAGGTGTGTCCACCCTCCTTTCTCATAAACAGCCGAAATCTG CTCCTCCTACCACCATAGGGAAATATCAAACGCAATATGCTTTCCTTGGC AAAATCGAAACTCCTAACCGCATTCAGAATGATAACGATGAAGAAACTCA ATTCCGATTATCCATCCGAAAACCTGACGtcattacccatgatccattag AAGAACTCATTATGCGGACCGTANCCATCCGAAAACCTGACGtcattacc catgatccattggAAGAACTCATTATGCGGACCGTAGAGGGAGCAGATGA CATTCGAACAGCGACTCGAGATATCGATCgaaagatgaagatgaagagtG CGATTGTCCCATCAATCAAGAAGACCTACCAAAGTAGTCATTTACAACGA GCTTTCATGAAAACACAAACTGGAATGAATTTCTCAGCTTTCAAGGCCGT CGAGAAAGCATACAACGACCGCGATAAAGCTGAAGTGCTCCTTCGTAAAA CACACGTGGTCAAGAAAGTCAAACATCAAGAGAAAATGACTCGAAATAAA GTCAAACGAAGTCAAAAGGCACATAAAAAGAACGCATGCGCAAACAAGGA TTCTGATCGTATCAAAATTCTTGAAGGGCTCCGAGTTCATCGTCAACGTG AGCTAGATCTGCAAGACGTGACAGCCCAATTCAGAGAACAGCGTGCGAAA GAAAGCGAGCGTGCGCGACGGAGTTACCAGTTTGCCTTGAACTTCCGCTC GCAAAACGCATCCGTAGGTAAAGCCTTGACCGACCACGATCATGTAAAAC GTAGACACGAGGCTAGTCAAAAGAAAGTGAAACGAGTAGAGGAACTCCGT GTGGAAAATGATGAGAAGAAAGAATTAATGAGAGATTATCAAGAACAGAA AGTGATGTTGAAACGAGCGGACATAGCGGCCGCGCGGGACGCCATCGAAC TACAACTGGTGAAGAATTCAACCAAACGTGAATGTGATTTACAAGATCAT ttgagaaaatataaaaataaacataCTCTAATTCTACGGTCGCCGAACAT TTTAGCAGTTTCTGACCTTCATTTACAAGATGCAATACCTCTAACGCCGT CCCTGGTTTGATAAGACGGAAttatttttcacctttttggaaattttgac agGTCAATAGTGTTTTTGGTTAACTTAGAAGAAGTCTCTCAATCTTTTCC TTTGTCTATTAGGTCGAttaattttgattaattttgattaatttatcGAA TTACAACCATTCTACTACACTTTTCAAATTACGTTCGCTACGGTCGGTCT TATCGAATCTTAGCCCTTTACTTGGctcaaagatatttattttttgttaa tat
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071919TCONS_00071919Clytia hemisphaericatranscript
TCONS_00071920TCONS_00071920Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071920-proteinTCONS_00071920-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_65supercontigscaffold_65:93684..98886 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.31 22.91 18.78 14.93 30.96 25.49 30.09 31.61 22.83 28.28 23.9 20.01 5.94 5.58 6.02 7.19 9.55 8.99 5.68 7.38 10.16 9.65 12.68 12.1 24.84 22.3 6.82 5.39 5.93 5.84