XLOC_044624 (gene) - C. hemisphaerica

Overview
NameXLOC_044624
Unique NameXLOC_044624
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_64:293729..303113-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044624 ID=XLOC_044624|Name=XLOC_044624|organism=Clytia hemisphaerica|type=gene|length=9385bp|location=Sequence derived from alignment at scaffold_64:293729..303113- (Clytia hemisphaerica)
CCATGAGTTAGTAAATTGTACTTAATTGATTTTAAATAATGAGAATGTAC
AATTAAAATAAATTTACAATGAATATAAATTTACAATAAATAAATTTTGA
AACCACCAAGAATTTATTAAGACCACCAAAATTTATTAGGACCAGCAAGA
ATTTTTGAAATTAATGAATAAATAATAATCTAAATTATTGCTTCCAAATG
TAACAAAAGTTTGTATGTGGGATGTTGTAAATATGGCAGTATTTGAGGTG
GTTGCGGAAAAAATGTTGGGTGTGGTGCTTGTGAAAAAAGTGTTGGGTGC
GGAGCTGCTTGCGGGAAAAATGTTGGTGCAGTGGTTGTGCGGTGGAAAAA
GTGCTGGTGTCTGATAAATCTTTATTGGTAGTTGTGCATACCGAGGTTGT
GGTTGGGGTCGTGGTAGTATTTGTGGTGGTGGTAAAGCGCTAGGTTGTTT
CTGGTGTTGATTTTGCTGGTGTTGATTTTAGTGGCAAGGATTTTGGTGGC
CAGGATTTTGGTGGTGTGGATTTATTTTGGTGACATATGATGAACCCAGC
TGACCGAAAGTACAATTACATAAATTATCATGGAAGTGAGCGCATAAAAG
ATGAATGTTTGGGAAATCAAAAGGACAACTTTTGTAAGGATGTTTTAAAT
TTTTTAAATATCAACGTTTGTGAATGACTCTTTAAATAAAGTCCCTTTCC
CCCAAAGCTTTCAACCTTGATGGGTGAATTGAATCAAATTGAATTGAATT
GAATATATTTTTCGCTGCAGTGCAGCAGAGGATAACCCAAAAAATACAAA
AAATTAGATCAAGAGCAGCCAGCGGCTAGAAATTACAGATTACCGTCAAC
TGCTCCAACTTGGAACGAGTGGTCGCAACATGAGACTTGTTGATATCTGG
TCTGTATTTTCACTTACTGTTAAATCTCTTTGACAACAAATTTTTTTGAT
TTGGTGATAACGCCACCAAGTTTATCAGTCATACTTTCTATCATAGCATG
TCACGATAACTTAAGGAAATCAATTTTCATAAGAGATTTTCATTTTTGCT
GACTTTAGTCAGTTCCAAGTCACATTTGTAAACATAAGTATTATTATATT
TTAAAGTAATATCGCGTTGGAAAGATAATTTTGAACAGATTGATTTGAGT
TCGCTAGGTTCGTTGCAATTATTTCTAGCTATTTAAATTAACAGTATCAC
TAAGACTTGCCTTATTATTCCACTCAAAATTATCTATTGGACGAATTTTT
ACTTGTATTATGACATGTTTCTATGTTCAAAAACTAGAAAATGCCTTTTC
TGAATTAGTTGGAACAGACGTTACATTAAGTTGATAAAAGAGCCAGTCAA
CACACTATTTTTCCCCAAAAGGATTGTTGACAGTCTATGTTTGTAAATCG
TGTATTTTGAAGCTAGATTATTTAGATTACTCTTACGCTGTTAAACTGTA
TATGCGAATTCTTATGTGATTATATTCTGAAAATATATCAAATAAAGTAA
TGAAAAATGTGATGCTTCCTCTTTTTTCTTGCGGTATTTTAACCAAACAA
TTTCGAGTATATGTTTCGCAAAAACCACTGATATTTAAACCTGATTTACC
CGAGTTTGAACTGTAAAGAGGCTGACGTGAGCAAACGGGTAAATCAGGTA
AACCCGAGAACCCTAGTTTCTATTTTTGGAATTTTTCCACCCGAAATACT
AGAGTAAATTGCTCATCTGGATTTTCGGGTATACCTCACGTCAATTACTT
GTGTTTAACCCTAGTATTACCCGAGTTAGTTTACCAGGGATATGGCCCCC
AAAACGGAGACGGCCCCCAAAACGGAGACGGCCCCCAAAACGGAGGTTTT
CATTAAAATGATTCTGACTTGTAGATTTATCAGAATTAAACGATTTTTGT
TTATTTTGAAAGAATGATGGTTATACTTAAAAATGAGCATGTTTTGCTGG
TTTGAGACGGATTCAAAATAACATATTTGCGTCTCAAGGAAATATTTTAA
CACCAAAATTAGATAAAAATTGCATATAACTCANGCCATTAGAAAAAAGC
TACCTATCTTTAATTAAGCGATTGAAAAATATTGTTGATATTGAAAATTT
TGAAAGAGAACTTCCAGGAAATAAAGTAGAGATGTTAAAGATTTCATGCA
GCAAAAATTTTTGTAAAATCTTTTTTCGTCTAGATTTGACAGAAATTTCA
AATTTGATCGCCGTTTTGGGGGCCACATACTGTATGTATTGTCTAGATAT
TTTGAATTTAACATCAATATCCGAATCAAGCCATGAATACTGTATCCTAA
CTAATAAATATTCAGGCTATCCCTGTGCTATCAAGTACTATCCCTGTCCG
TCTNCCCTAGAGTCAGCATTGACAAAACCGATAATTCTAAATATGAGAAA
AAGCAAAAAATCTTGGAATTCTATTCCTATCACCTTGAGTTAATAGTTTA
TAACAAAAAATTAACATTATATATNGATCACACAAATTTAGTGGACTATA
TGCTTGACTTGCCCTCCCTTGGATGGTTGAGTCTCAGGCAAAATTCCAAG
CACTTTTCCCACTGGCCGTTTTTTGATCTAGAAATTGAGTTTCAGCCATG
CCATTGCTATTATCTGAGACCCCCCCCCCCTAACGGACTCCTAGTTAAGA
GTTTATTAATGATATCAAGAATTAAAATGCAACAAAAATAANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
TAGTGACTATAATAGAATACACTTTAACCATGCATGGATAGGGGCCGCGG
CTCCACTTTGAAAGTGGTAGGTGTTAGGGTGATAGGGCCGTAGTTTAGTG
TCCCTTAATTAGTGTCTAAGGAGGCGCCAGGATGGTTGGCGCCGACGGGA
GAAAATTTTAGAGAATTAGCCCTTCTAGACTGGTTAAAACAGGTCTTTTT
TAAAGCTTATGGCCCCTGATGGAAAGAAATGCTTGAAGAACAAAAGAAAT
GCTTCAAGAACAAAAGAAACAAAGCTTTATTTATTAAAGTAAGATTTCAA
AATAAAAAAGGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAT
ATTTCTAGCGGCCTTCTTAGTAAATCAATAAAACGGTTAATAATTCTACT
CTACAATAGAATAAAAAAATAAAACTGTAGGTAACAATAAAAAGAATGGC
CCTGAAAAAACAAATGTTTTGATATTTTTCTAATGAGCCTTCGATTCGAA
TGTTTTGATGTTGATTTCGTCAAAAGAATTGCAAGAGAGAAAAACACACA
AAGAGAGAAGAAAAAATATTATATTGTTGAAAGATATAAAGAATGCGAGA
GAAATTGAGCTTACCTTTGATTATAGAGTAAATAACTTTGACTATTGTTT
ACTAAGGCAATTACTTTTTTATTTTCTGGTTTACGGAATCGCCGACGTTT
TTTTTGCAAAAATAAAATAAAAATAAAATCAAAATTCATAGAAATTTTAT
TCATTTTTGCACTTCCGATTCTGTTTAATCTGCCATGAAATGGATTTTTT
TAGAAAACTTCATTTTATAAGAGCAGGAAAGGAAGATAAAAGGGTGTAAA
AACAGATCTCTTTTTCCCAATATGCTTCCTCCAATGGCGCTCAACACAAT
TTTCCAGCTGAAAAACTTTCTTTGATTTTCTGCTGTGTATGTAAGTTTCC
TCAAAACACATTTTATTTTCTCCAATATTAAAGTTTGAAAACAACAATTT
TATTTTTATTTTTTTCCATCCTCCGCTCCAAAAGATCATCTCCAAATGAC
TGTAAACCAGAAAATAAAAAAGTACTTGCCTAAGGTTTACTGTCTATATT
TTTCCGAATTTTCATGACTCAAAAAAAATTTTTTCTTCAAATATTGAGTT
TCAAAACTCAATTTAAAATTGAGTTTTCTGGCCGTATAACGGCCACAGAA
AAGTGCTTGGAATTTTCACTGAGTCTGACTTCCCGTTTACCGTTTGGGTG
GGCAATTTCAAAAGGAATTTGATAATTGATTAGGCAAGACTAGGAAGGTA
CTGGCTAAACAATAAGGAACCTAAAACTTCAAAAATTATAGATTTGCGAA
AATTTAGACGATGTTATCGTCCTATACAGTGATTGATAGTAAAGGCGGGG
AAATATGGCCGTTTGGCGTTAAGGCGATGCACGGAGAAAAAAAATCGGCG
GGAGAGTTTCGAAAAAAGATTACCAAACTCTACCGACTGTAAACTCTTTT
TGGCAAAAAAACTTGACTTGCAAATTTTCTTTGGCTTTGGGCTTATTTCT
TAGAATTTAGATAATTATTTGTCTTAGACTATAGCATAGTCTAGCGAAAA
TTGCGATTACCACCAAAATTGATTACCGCCAAAATTAGGAGCAGTATCTT
TGCTTGTAAAATACTGTCTCGTTTTAATGCCTTTGAAAAGCTTCACATAG
ATCTTCTGATGTTGAATGAATGAAATTGATTAAAACAATCACCTCTGAAC
AAAAGCAAAACTTTATTTTACACCAAAGATCATTTGATTAGATAAAATGA
AGAGTTTATAGTTTATAAGGTACAATTAGTAGTTCTATATATAGTACTTT
TCTTGCCAGTGAGCTATAAAGACGACATAATATCGAATCAACCGTGATAA
ATACCAGGTACCAATCAACAAAAGAATATTGTATTTTGTTTAAAAAAAAG
GGTTTAATTCCTTTTACTCGTGTCTAATTCCAGCAAAATCAAGTCAAAAA
AGTAACAGGACAGTATACCGGACACTAACCCAACGATTTTCAATAAAATT
TTATCGACTAGATCGTCCATTTCTTCTCCTAAGTTAAAGCTACGTTTTGA
TACTTGACATCATGCTCATCGCTCGATCTTCTAATCAACATGTATTCCAC
ACAGCTTAACAAACCTACCAAAAGAATGTAACCATAAGCTAAACCAGCAT
AAATCAAAGGTGATCCAATCGATTCTTTCAACTCGCTGTTAATAGCCATT
TCCATGACTGCAGGAATACCAATGGCTGTAACTTGTTGGTAGTTTCCCAT
TATCTGATTGATTAGTGCCATGTTAATCATTCCACTTGGACTCACACCTC
CACTACGACCCATTGTGGAATCGGTTGTATAATGACCACTATATCCTGGG
CTTCCATCGTCTCGACGTCGTCTTGAGTTTCCTCCGTCTATTCCGCCCGT
ACCGCCCATATCTCCTCCAACGAAACCACCCATAATGTTTGGATCACCTC
CGCCCGATTGGCGATATTTGAGAAAGCTTTTGACTTGATTGTAACTACTT
TTGAATTGGAATTTATTGTGTACAACATCGAGAGCGCATATGATAAAAAC
ACCTGAAGAAAAATAGAGATATTCTTGTCCACATAGGGTACTTTCACGTA
TCTTCTAGATCATTAAACTGTAGTATGTCAAAGAATTGACATATGATATC
ACGGCGAACCTCATATATTGAGTGAATTTTTGTCATGTTAAAGATTTAAA
TTTTTATTCTCAAAGCAATATTTTGTGACGAACATTCTTATTTCTGACCA
ATAAATTTTCTTACTAAGACCACTCTAAAATGAAAGCTTTCACCTATCTC
GTAACCAGACTTTTTTGGAACAGTATGAAATATACTTACTTGCGATGGTG
CAGCAAATTAAACTTCCAAAGATGAATTTTGTTGGATATTTGAAGGCTTT
CAAAAGAACAAAGATTAAGCCAATAACAACAAATAGTAATGCCAATGCCA
TACAGATATAAGCAGTTTTTAATGCTGAAAAGAAGTAAAGAATTTATCAA
TTCTGAGTAATCAGTACTAAGACAGACTAAGAAAATGCTTTGATTAACAG
CTTAAAATTTAGATTTTGAATAGTAATTATTCTAGACGAAATGTATTGGA
GACTTCTTTTTTTAACAAGGACTAAAGGCAGACAAACATTATATTTGGTC
TGTGATAATGCAGAATTGACGTTATATTACTCTCGTAGCTTAAAAGTTTT
ATTTTTATGCCTCAAATATTTTACAATTCATTCAACCTGATAGAATTGAA
AAACATCGACTGATTTTACTGACCTGAAGCTTCATCTTCAAGCATTTGTA
GAACCTCCACAAACGGCTTCACAGTGACACCATATTCCCATGGTTCGCCA
AAAATGTCGTTCTTAACACACCATGTCATCTCTGGGACAACCAGTTGGAC
TGGGTTTGACATTCCACTGGCAGTGATCGTCAAGCAGGTTTTTCGAAGAC
CGAAATGAGCCATTATATCGATCGTTGAGTCTTCAGGAAGCATACTAAAT
AGGTCCTGATTCTTAGTTACCGATGCTATTTTACCAGTGATGTTGGATGC
CATATCAAATAATGGACTCAAATGACCCATTTTCATTTTAAGTTCTTCAC
GCATCCAATCTTGTCTTGACACAGACATTGTGATGAGAACTCCAGTACTC
ACCAATGATATCAAGATACCATATCGCAATAATGTGAATGTTACAATGTT
AGAAGAACCCATCTTTCTGTGCCTTGAATTGTTGTTCTTTTGCTACCTGC
TTTTTCCTTTTTTCTCTGGTTTGGAGGAGAAAAAATAAAAAAACTACCTT
ATGGAGATTAATTTTCACGGGAACTTATTTTCGCGAGACAATTTTTTCGC
GAAATAATTTAATTTTCGCGGGAGTTATTTTCGCGAGCACAGAAAATGAA
AATTTTCGCAAGGATAAAATTTTGCAAAGCAGCCCTTTTTTGTCCGAATT
TCTTTATTTTTCCTAGGGGTTCAGGCAAAAACATGATTTTAAATTTTTCG
CAAGGATTATATTTTGCGAATTTCGCGAATACTAAGGTTTTTAAATTTTT
CGCGAGGATTAATTTTCGCGGAAATTCGCGAAATATGATCCCTCGCGAAA
ATTAATCCCCTTAAGGTATTATACCCAATTGATAGAAAAATTCTTTCATG
TTCATATCTTACCCCTCGATGGCCGAAAGCTTCCAACTTTATAAACACTG
TCTAGCAGAATATTTTGAAGTACTTTTTCTCAATACGAGGCCTCTACCTT
GCACCAGAGAACCATAGATTTGTCTCTGCTTGATCGACGTCAACTCATAT
TTCTTTTCTACAGATCATACTGCTCAGATTTAATATAGAGATAATATATA
TAGCGTACAAAACCACTGTACAAATACATTAACAATAAACTTTAAAAAAA
AAAATTCTTGTCTTACAGTACACGTTTTTTTATAAGAACAAACTATATAA
GAACATTAGGCTTCGATGGCCAAAATATTAAGAACAAGTTAAGAGCATTT
TAACTCCAGGGGAATAAGGCGGGTTCGTGGAGGTCAAAATTCTTGCAACG
TTACAAATCATTTTCAGAAGCTCGTTTTGGGCTCAAACGAAGCGTATAAC
TAATTAGAATAAGATTCAGTCTAGGCAGATGTTTTTTCATTTTGAAATTT
TGCGTAATTCGCAAAAACCCTCAATTTTGCGCTATTTTGATGACGTCATA
AAAATTGAAATTCAAATAACTTTTGATAGAAACATCAAAACAATTTCAAA
CTTTCACCAAAGATGCATATTATCAATTAAGTACAATTTACTAACTCATG
TTGATAATTAGATTACTTCCTTTTCTTCAATCTGTTTCCATTTAGTTTTT
CGATCTATGTCTGTCTCATGAAGTTAGTATAACAAAAAACCCTGCCCGAG
GTGTTTATAATCATCTTAGCTACTTCACATGGTGCTCGGTTGAGAACAGA
ATTTTTAAGGTTAAAAATTAGAAAACTTTTCAGTTTTTCGTCTACTTTTT
TAGTCATTTTTGCCATTTGCTAAGGTGGAAATAGGAAAAAATTTCAAATT
TTTGTTCTGAAGGTCATGTTGAGGGTTTTGGTCGGAGCATGGTCGCAATC
CTTGGGAAATTCTTTTATAGCATAGCGGAAAATTGATTTGATCTCTCGTT
GATTATAATTGTGGTTGAAATGGTAAGGTATATTTCATCATTGACGTCAG
TAACACCTTTCTTAAGAAAGATTTTTTCGACATATTCACTTTGAATTATT
GGTGAAATTTCTGCTAATACAAAAATGCTCAGCTATCAAAATTTCAAGGA
ATTCCTTCTGGAGTTACTGTAAATGTCTTTCCTTTCGAATGGATTTAGTC
GGAGACTAAAGGAAGGTTGATACAATATGTTACAATTTGTATTTTGATGA
TAATGTCGGTGAATTCAATGTTAAATTTCTGATTTAATCTTTTGCTTAAT
TTAAAAATCTATTTTATAAGGCGAGACCAATTTAATTTGTTGTTCTACAG
GCCCGACCAACCCAGCATTTGCTAAAATCAAAAAAATTGTAATATTGAAT
TTCGACTACAATATATTTTACACACTAGTTATTTGTAAGAATTAAATTTG
AATAAAGCTGAAAATTAATTCAAGAAATTGAAAAATTTAGAAAAATCACA
CATTCCATACACTAAAATTTTATAATGATCTTCATTGAAGATAAAAAAAG
TGAATTCTTGATCCAGATATTTTTTGGAAAATATTTTCGGTACCTTACCA
ACCCTGATAAATGAAAAAATTTATTCTTATTTTACCGACCGACCGACCCA
TACTTTTCTAAAGATCTGCCCGTAGAATAATAAATTAAATTGGTCTCGCC
TAACTGGTAAAAATAAATCATATATTGATCTGATAAATCATTATTGGTAG
TTGTGCATACTGAGGTTGTGGTTGGGGTCGTGGCAGTATCAATCATATTT
GTGGTGGTGGTAAAGCGCTAGGTTGTTCCTGGTGTTGATTTTGATGGTGG
CCAGGATTTTGATGGTGGCCAGGATTTTGATGGCATGAATTTTGGTGACA
TATGATAGACCTTTTCGGCTTTCCATCCGCCATCTTGAATTGTATGCAAA
AATAGAGGAACAAAAAAGCCGTGCTTGGATTTAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071886TCONS_00071886Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_64supercontigscaffold_64:293729..303113 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.55	4.29	9.92	5.29	16.4	10.94	9.99	11.54	8.15	8.86	11.51	9.14	7.43	9.49	9	10.38	3.38	4	1.12	2.24	1.85	2.4	4.82	3.21	2.9	3.94	2.57	1.76	4.3	3.25