XLOC_044534 (gene) - C. hemisphaerica

Overview
NameXLOC_044534
Unique NameXLOC_044534
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_63:1108080..1117389+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044534 ID=XLOC_044534|Name=XLOC_044534|organism=Clytia hemisphaerica|type=gene|length=9310bp|location=Sequence derived from alignment at scaffold_63:1108080..1117389+ (Clytia hemisphaerica)
GCTTTTAATACACATTCCCGTTTTCGGTTTATCGCCAGTTCCGGATCCGT TCCGTATGTATATTCGCCATATTTCCGGTCGAAAGTTGACTTGTGGGAAT CGATTATTACCCATCGGACTTTGCTGCGCCTCTCCTGTTCTCTCCTGTTG CTGTCAAACAGACAAACACCCCTTGGGTAAATCCATTTTAATACCAACAA AGATGCCACGAAAACTCATCTATGAACTGATAAAAAAGCATCCGGAAATA GGAGAACACTTTTTAGGTaagtatttttatttattattgttttttcaCAC CGCAATGAATGTTTTTGTTGGCTTACACATGtctatttttataagcacca tTACAGTACATCTTGGAGAAAGTATCCAGGCCCTTAGATAATACTGCCTT GAATGCATTTCAATTAGAGTAAAAGTACTACATTCCATTGATTAGGTTAT AGAAACAGACTTTCCTTAGGTTATGCCAAACAATTTAAGTCCTGATTTTT AAGGAATTTACAtgaccctggacaccgccgtacattgcgCTGTGCTGTCC GGTGGGTGTATGGTGGTATTTTAGGTAAGATCGAAAACACCATACAAAAT CCCTATGCACATGGAAAAGACCGCCGTACATTgccaggcggtgtcaatcg aacagttcgattatTGAACTATTCGAACTttatcgaaccaaatcgaacga taggtgttcgattaccgaacccaatcgaacacctatcgaacTGGGAAATT TTCGTCaagttcgatgactgttcgatgATAGTCCGATAAAGTTCGATTGA AGTTCGATGAATTTGATTAAGGTTTGATCAGTTCGATTAagatcgatgaa gttcgatttgGTTCAATTAGTTCAATTTATaccttttcttatttattttc taatggcgtattggcggctgGCGTCCGCCCAAAATGACCTTAGTTCCTGT CGTGATTTTGAGAGCGCTAGGTATCCTGGTATCGGCGCGGGTTACTCcat caaacatcaatcgaacttcatcgaacaaaAAAGGtcatcgaacttaatcg aactaatcaagaaatttttgtaaagttcgataggtgttcgattgggttcg gtaatcgaacacctatcgtttgattgtgttcgataaagttcgatGGTTCG ATTACAAAAATCGGTTCGATAGGGTCCGGTTGACAccgccagacgatctc aatcgaacggaatcgacgatcgaaccagtcaaaccaaatcaaacgcaatc gactgattgaaattcgattgtcgaacgcaatcgaatctcaatcgaacgtc agaATTCTGGGTAANatcaaacgcaatcgaccgattgaaattcgattgtc gaacgcaatcgaatctcaatcgaacatcaaaattctgggtaatattcgat tggttcgattgttgttcgattgcattcgattgtcATTCGACTGCATTCGG TGTATGTTTGGAAGAACATTTTTACATCGGTGGCTGCCAAATAAGGAAAA GTCCAATTAAACATATacgaacccaatcgaacacaTTCAAACAAAATCCG AATGCAGTCAAATCCTAATTTAATGCAATCGAATCCTAAtagaacgcaat cgaacatcaatcgaacatcaatcgaacgcaatcgaataccCCTTGCGCAC ATTGATTTTAGGGAAAATGCAAGCTTTTTAGACAGTATCAAAAAAAACCT TCTTTGGTTCTGTTGAATTTGCTTAAGTTTAGGGGAGCCGTCCacattca tttgacaacgcataatgtcaatttgacgttatgagggggtggggggtttt caaaagtttgttttgacgTTATCTGAAATCGaaggtatacctttttgtga aaattgcgAATATTCGTTACCATCAACCACACaatttttaaaaggtttta aaCTTTCAGAGGTTGGCAGGTCTGGGGCTAAATTTTTGGGACTTTtttcc tgggggggggggctgagaCCCCTGAGGACACTATGTGTTGTCataacata ttttttattgtttgcgTGATCAAGCAAACAACATCGCACAAGTGGGCAAA GAAGGTGGTGCACCTAATCACGGCACGGACCTAGCGCCGAGTGGAGCTTT TAATCTTCTTCTTaaaggtcattagttaaaagaacatACAAACAGTGCAC GCACGTGTACAACGAAGTAGGACGTTCAATTTGACGttatgcgttgtcaa atgaatatggacggctcccctTGAGAGTAGTTTCTATTTTTATTGGAGTA ATTTGGAAATCTTCCAAAATAggcaaaataattttctttcttttagaaCA AGACAAAGATGACAATTTTATTCTCGGACTATCCTACCGAGAATACAAGG CGTTTTTGTCAGATTTTCCATCGTTGGAAAGATTTAATGCATGGACTGTC GTTGAGGTAATTTATTCATTCGTTTGTCTGTTGCTTTATCAACTCTCTAC TTTGCAACTTCATTCACTTGTTTGTCCATTGCTTTATAAGCTCACTACTT CGCTTTGTCTTACTTTGCTTTTCTAGAGAAATGAATTGAAAATACTAtcg cattttttttcaaacaacaccgcaaaatactaaaaatgctttgcaaaaag tgaaaaaattttcgcctgtGGCACTGCTTTTTTTACTTCGTTTCGCTCAG AAAAAATTGCAAAGCTCCTAAAATTTGCAATGCGAACCCTGTCcagaact ttctaaaaatcactggaagtatttcttgaatttctctaGCTGTACTTTTA TATTTTCTCATGAAATTTgaacactgatgcaaaatgacaatttctATCCG ACTTTTGAGAAAGGTTTTTTCCTGCCGGAAATCACCAGTTTTacaagatt ttcattggattttttccttacatTACATTGTTTTTCacataaaatatcaa catttattttggaaaagttACAGGAACAGCCGATTGATGTGAcagaaatg ttgaaaaaattgctaCCCTTTACTACTGACCCCTCTTTTAAGCTCTTAAG CTGCTTTGAAAACAATCCCAAAGTGACAgagaattagaaaaaattaaaga attatAGCCATGATGacttcctttttttaaacaGGACTGGATGGGAACAT GTGATACCCCGCCTCTAGCACTATCACCAAACCAGTCGCCACACTCAACT ATTCAGCAAAATCTTCAAACTATCCATGTTCCGCTTGAGACACAATCCTT CCAATTACCGAGATTAACTTCCCAACAACCCATTTGTGTCTCGCCAAAGA CACAATCTACCCAGTCACCATGCCCCAGAGAAGAGTCCTCCATCCGAAGA GAAGAGTCCTCCATCCAAAGAGAAGAGTCCTCCATCCGAAGAGAAGAGTC CTCCATCCGAAGAGAAGAGTCCTCCATCCGAAGAGAAGGGTCCTCCATCC GAAGAGAAGAGCAGATGTGTCCTCCATCTATCTTGAAATCAGACGGTGGA AAAATACTACTGTCCTCATTCTCGTGGATTGAGAAGGCAGCCGCATGTCA CCAGCCAGACATTTTGGTGATAAGTTCTCCAAGGTTTGTTGTCTACAAGG ATGCGAAACTCATGAATACTGAAAAAGCAGGTGGACTAAACAAAACGCAA GTTGATCAATTACTAAGAACCACGATAACTAACATGCAAACGGAACTGTC TCTCAGAAAGTATCCTAGAACTCCTTCAGATGAAGAACTGGAGGAGATGG CTAAAGCCTTAACAATTACCTATCCGTCCTTGATTGACGAGCTCAACAGT CATGTAAGTTGTGattcttttttaaaatgaaaatttgataatatgaatca aaaaagtgaaaaacgtGCAAGCCTTTAAGTAAAGGgacattgatttttaa tttgtgATAGTTGTGTACTATCCtttctaatttaaattcatttgtgtcag caaaaaaaattatcagttCTATAGTGCAGTAAGCACTTGCAACGGCAAAA GCAAGATTTACATCAACATTTGTGCCTattggcaataaccgaatgcaTAT GTGAATTAGAATGGCTGTGTATTATTGCTTTTTTGCTTTGTTATTTTAGG AAGACTGTTTATCTAAATTAACAAGGCGTGTTTACAACGATCCTAATTGT CGAGGTATGAAATGGTTTACTCTTttgttccttattttttggggtcattt tgtaatttttgaaattgaatctGGTAGATTTCAAGGTACTCCAATTACCT TAAAACCATTAATTATTTTCACAAGTGTGAAAAAGGCCTTTTTTCATGCC CTCAGCTAAGCAAAATAGGAATAACtttaatgtcagaaattttCGCAACC AGAAATTTCGTGAGTCAGGCCATTCACAAAATTTCGCTTAGTTTtatgga atttaattttgcgaatcagCAAcatctatttatttatttcatggaattaa ttttcgcaaaattggatTTTCCCAAACAACAAAAACGCTGAAGGTAAAAA AAGCCTGTTTTTATGTTCTATGAAGCAAAAAATGACCAAGCAAATCTGAA AACTATGTCCCTTGGGAATTAATTTTTCCGAATTAAGAGGTCAATCgcga aaattctgaaattttttaacataaaagttatctggAGGTGTAGAAACATC AATTTGGCTCTAGTTTTTTGCAAAACAACTTTGATTCAGGTTAGGTATAC TTTTGTGGTGTAAAACCTTGCTCCAGTGTACTAAACTTTGTTcgttattt ttatttgcttcCAACTGTTTCATGTTTCGTTTCAGCGGTAAGTGAGGCTG CAGGTGAAAGGAAACGccagaagagaaaaataaaattaccaCAGAGCAGC ACCCATAAAAAGAAGAAGCTTACCTTTGCAGCTGATAGAGGTATTTACCA ATATTATacacatgttttttttcttcaagcaATTGTCTGCTCAAGTACGT TGATTCTATTACCAAATTCAGGCTTCTTCAAATTTGACTTGTTTGGTTAT CCAATGTGATAGTGTTCGTTGAGTGAAAAAGGTAGAAATTTTGGCCGAaa gaaaaatttggcaaatttgtcTGAAATCCGCCTCCccccaaatttaattt tttcattttatgtctgatttttcacaatttacccCCAAAAGAATGAATAA TCAATGTATTCCCCAAATTTTAGCTTTAATAATCTGTCACCCggcaaatt aaattcccgcaaaaatttactttttcccTGATTTGCCAAATTGAATTCcc tatgaaaaaactttttcagtcATCCTCCAAATTAAAATCCCACCATAATT TCCTTACAGATATTTTAAGTGTCAGAAGCCTTGAATGGAATTGAAGGTCT TTCAGGAATCTCTCAATGACTTTTAATTTGTTTTCCCATTTATCTAGGGC ATGACACAGTGAAAAAAGCAGTAGACTCAGCCGGTGACATATCAGAAGTG GCAGATGGTGAAGTAGCAGAAGTTTCAGACGGTAAAGTAGCGGAATTTTT CCTAATTCGCCAAATTGAATTCCCTATGAAAAAACTTTCAGTTATCCTCC AAATTAAAATCCTGCCATCATTTCTTCCTTAAAGGTATTTTAAGTGTCAG AAGCCTTGAATGGAATTGAAGGTCTTTCAGGAATCTCCCAATGACTTTAA ATTTGTTTTCTCATTTATCTAGGGCATGACACAGTGAAAAGACCAAGTGA CACATCAGGAGACTCAGCCAGTGACATAACAGAAGTGACCGATGGTGAAA CAACAAAAGTGACCGATGGTGAAACAACAGAAGTTTTGGGTGCTGAAGCA GCAGAGGTTGACGTCCATAATGATCGGTTCATGATATTGCTCTCCAAAGA GAGCAATAAGAAGACAAAGAATTTAACAGCCATACATTTCTATCTGAATA AAACCTTCAATCATCGAAGATCCATTATGAAAACTTGTCCTACATCTgaa aagctggaaaaactgCTGAAAATCTTTCCAGCAATGAAAGATCCAATTGA ggtattttttccatcccacATTGTGCTTTAAATCAATTAATCTGTGATGA ATTTGTTATTGCTTTTGTTGTCTAATATTTCAAGTAAACCAACATCGAAT GATTATGGTATTTAACTTTTGAATATACtggaataaaataaaagaccaat ttgcccaaaattacAACCCCAAGGGAACTAATATTTTACCCCCTAACTGC GAAATTTAGTTTcgcaaaaattttttgattgtaAATTAAAGGTTCATAAA TTCACACAACGGTCAATTTTTTTAGGGAATTTAAACCTCAAATTCACGTA CTATAGAAATTAGTagaaattagtttttttatggaaaatctAAACGTAAA ATTgaatggaatttttttcttcagataaTCAACGAAGTTAGACGACTTAA AAACGAAGAAGAGGCGTTAACGTTTAATGCCTATCCAAACAAAAGGACAG CAAAGCTTGCGTCAAACCTAGACAATCTGATATATTATGCATTATCAAAG AAGGGCCTGGACCCACCAAAGTTACGCAAACCAGGTAAATACCTTTAGCT GAAAAAACATTTCAGTTAATTTGAAATAAGCATACCCAACCAGGGTATAA TTCCCTTTTATGGTTTTGTTAAAATACCCTCACTCGCAGTTAAATTTTTG CCCATATTCGACTCAATTGAAATATAATGTAATAAAATTAAGGCAGATTT TTGGCTGCTCATAGCTTAATAAGTAGTTTTGAATTTGTTTGCaaaattta ttgtattttttatctAGATGATGTCGACGGAAAGCTTCGATACGTCTTGG AAAATTTTGTCGATATCTTCCAGAAGAAAACAACTAAAAGAAAAGTTCAT GTCGAACTTCATGTAAGTTTTCATATACTTAAAATTTCACTTTCTAGGGA CGGACGGGAACAAGAACGTCTTAGGGGAAAATGGATCTTTATTTCTTCAC TGGTATATTTGTGAGACAGTGAAAAATAATTTGGTTGTGGGTGGAAGAAT TATTGTAAGGATTAATAGTTTGCAGAGGAGTAGTCGCCCCTAAGTTTATT TCATCCCCTATATACCCAAACCCCTTCTGTAATGAACTCGTACCCTCCCC TACAGAAAAAGGTGTGCAAACTAAGCTTTCaagattttttggccattttg aggaGGCCACTTTTAGGGCTGAGCCCTTTCTTGctataaaaatgtgtatt cgTAGGCCCGATTTTCCAGCTAAAATCTNGCCCTTTCTTGctataaaaat gtgtattcgTAAGCCCGATTTTCCAGctaaaatcttcatcttttctTCTT TGTCTACAGGATAATGATGATCCAGAAAAAGCGACCTCGAAATTGTCGGC AGCATACCCCATTTTGATCCTGGAAAGTTCCAAACATGCATCTTTGTTAT TGAAcaaaacaatcattttcagAGAATCCGACCTAGCATTATCGATAGTC GCCTTGATTGGAATGTATTATCTCTTGGACATGGATTATCCGTACGATTT GGAGATTGGGCTCACAATGCTCCAAGTCATCATATATGAAGACCTCACTG CGAGGAAGAAAATCCTAAAGGATTTAAACAAAGAAATTGCAGCCTTTCAG GACTTTGTTGAAGGAAAATAGACAATTCACTGGTTTTTTCATCATAACGG AGTTAGATTTTTGACACATACTTTGTTTAcattgttttcttttgaatatT GTTTTTTGTCACGTGGTTGCTTACAATGAAAATGCGTATCTTAAAAAATT GGGTGTTGTATAATTGTATCAAAAGTACCTTCATTGCACACTTCAGTGCC TCTTTTAGGTTAATTATTGGTTTCGGCATGCTTCAGGGCTAGGTTGATAA GTCAAGCTGCTTAATCTTTTAGCCATTGTAGCCTTAACAGCTCGGTTGCT CAACAAAAAATGTATACGCATATTAATGTTTTTAAACATCCCTATTTTTA ACCATACACACTTTTGACCGCAAGCTATGTACATATTTTTAACCATAGGG TCACATATTTTTAGCCATAGGATCATATTTTTAACCACAAGCTAATGTAC ATATTTTCAGGCATAGTATATATTTTTAACCACAAGCTTacattcatgat atacaccactggagagtctccCTACAATCTTTGAAGTATTCAACCCAATA AAAAAccctattgtttaagtgacgtatgagttgaatattttgaaaattct cgactctccagtggtgcatatcatgaataaatacttttctgtgcttaatt gtaggagGTTGAATAAGCAGAGGGGAAGGGTAGACACTCCagggaaaaaa aatcattaaatagGGGGTGATAATAATTAAGGGATATTGATTGGTGtgat ttttagtgattttcttttctgatttagttttttgacactttttggaCAAA TGTCATAAAGTGGGGGGTTACTATAGagtaattttggtgttaaataTGGA AAACGACCCTCTCTACAATTACAGTAAGCACAGAAGAGTACGTTTTTTTA TCATAGGATATATTTTTAACCACAAGCTATACTTATATTAACCAAAAAGC ATTTATTATGGTTTGTTGTAAATAGTCCGGCTTCAGCAGAAAAGAAAACA ACGACAAATGAAACATGACTTAAATTAAGTAATTcattacttgatttttt ctagTAAAATAATACTGAAAATAAGTAAATTATCCTAGATATACGGACAA AATCCATTAAGTAAAATATTACtagttacaattttttttttactgaaaac AAAACCGGATTTTTACAGTGTATGAATTAAAGCTTAATCTACCTACATCA ATCGCACCTGTAGAAAGCTCCAAGAAAGTCTAAATGCAAGCTTTCTGACT GAGAAATATTACCCGATGTCAAGTaccgaccgagcttgcgaggttgttac ATTGACcaagggcaatattttcagtacagcccgaaaaaacggttattatt gtatttgttaaccgtttccttcagcttcgattgatttttagcgctttata caggaaaaatagcgaaataaactaaaaaaaaaaacaagcgaaaagagata aaaaattgttataatttctgacgtcagaaataaaaaatgagataaATGAT GTCAAAcgcattttcctttgaaaaagtgacgtcacaatgaattttcctaa cgacgggcaactctgggcagtgtaggcccgtcgtcatgcgaaaagaacca attgcattgtgAAAAATCCGTGTAGCATCTGTGTCCCTCCTATACACACC ACAAAAAATACAAGGTCTGAGTGCCTACGTCGAAACTCTGTATAAGAGTA CTTCTATCGTTTCCCTATTATTGATAtatctcaaaaaatacaaaatgaaa tAGGAAAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071691TCONS_00071691Clytia hemisphaericatranscript
TCONS_00071692TCONS_00071692Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071691-proteinTCONS_00071691-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_63supercontigscaffold_63:1108080..1117389 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.15 0.18 0.61 0.81 55.81 41.52 19.42 22.54 8.34 12.91 7.39 8.55 9.28 6.07 0.17 0.15 0.16 0.14 0.61 0.7 0.24 0.18 0.1 0.11 5.76 7.35 0.41 0.32 0.49 0.37