XLOC_044520 (gene) - C. hemisphaerica

Overview
NameXLOC_044520
Unique NameXLOC_044520
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_63:420430..424315+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044520 ID=XLOC_044520|Name=XLOC_044520|organism=Clytia hemisphaerica|type=gene|length=3886bp|location=Sequence derived from alignment at scaffold_63:420430..424315+ (Clytia hemisphaerica)
CCGAAGAactacaaaaatttacaaaacgcACCAAAATGGGATCTGGATCG AGTAAAAACGATCCACACAAAATGACGAAGAAAGATTTAAGACATTTCTT GAAGGAGATCAAGCCGCATGCAGCAGGGATAAATGATATGGCAATGACGC CTGATTGTTCAAAATTACTGACGGTAAGTGTATTTAGTGGGCCCTTAATG AAAAAGGGAACGCGCACATCTGAGAGTTTGTGATATTTTTAACTGTGTCA AAATCTCTGGAACAAGCTATGTtcaccaaattttttttataaggaactat aactttgctctgagccttgAGTTCCTGATTTTATCAGAgagtttcagcct caaagttccttatcgagctccttatttacatagctgttAAGTTGGGAttt gatatattttctttttgtcaCATTGAATGTCGTTTCAGCAGTATTTTTCG TCTCGAGTTCCTTGTAAACGTGCTccttatcacgcctctcctaaactatt cccttttttagtgatcttgtgtagacgataggatcgtctaggtATTGACC TGGATTAAGTGGTGATTCCATTAGGGTACAAAATTCAAACAACATATATC AAAGATCTTTGATTGCCAGGATTGTGGAGCTGTCTCCAGGGTTCAAAATT CAATCAACATATATCAAAGATCTTTGATTGCCAGGATTGTGGAGCTGTCT CCAGGATTCAAAATTCAATCAACATATATCAAAGATCTTTGATTGCCAGG ATTGTGGAGCTGTCTCCAGGGTTTTGATTAAACTCAGTGGTTTCCGAAAC AGTGGTCTTCGATCATCTTCAGTTTGATTATTCTTTTGAAACTGTGATGC TCGTCATGAAAAGGTTCTTTCCTATTCCACATCAATTTTATAAGTTGGAG AAGACACCAAGAGGCCGATTTTCACTTTGAGTTAAAGCTTTCAATCTTTG CTGATATCTTCTTCTTTCGAAACAACGATTATCCTCCGTAAATGATTTAT ATTTCCAAATCAATTTACAGGTTGGGGAAGACACAGATGCTCGTCTTATC GTTAGTGAAGGTCGAGATATTCACGAACTGGAAGGCCACGAAAAGTACAT CAACTGTGTAGTTTGTACCAATAAATTTGCTTTCACGGCTGCTATGGATG GAAGTATTCGTAAATGGTCACTAGATATTAGTTCTCCAGATCTTGGCAAA AGCTGCCTAGATCTTAAAGGCCATAACGGGTCTGTCAACAGACTACAGTT AGAGGGTAGTCTACTTTTCTCATCGTCATACGACCGTACGGCCAAATGCT GGAGCGCAGACACAGGAGAATGTTTACGTACGTTTAGCGGGCATCGAGGT AGCATCTATCCGCTTCTCTATATGCCAAAGTCTACGGAAGACACCGAGAC AGACCAGACAGACCTACAAAACAACCATGATTTTTTGGTAACTGGAAGCG CAGATTGCAATGCACGTCTATGGGCTTTGAGTAGCAAGAAAACGATCAGA ATATTTACCGGTCACGATGGTACTATTTTGACCCTGGGGTCGGATAGTGC GCATAAGACACTATATACGGGAAGTACAGATCACACTATCTGCGCTTACA ATATGCTGAATGgtgaaaaaatttgcaaattcaCAGGACATAAAGGGATC GTTGTTGAAATTAAAGTAAGGGCTCACTTTTCTAACAATACATTAAAGAT CGAGTTAGAGAAATAATCGACTGCACCACAAATCTTTGATTCTTTACATT ATTTCAGATCGTAAATCGATTGATGTTTTCATCAAGCGCTGACCATACTG TCAAATGTTGGTTGATTGGGGACGGTGAATTTCAGGGCCATCTGATGAGG ACATACGTCGGCCACACCCATACCATAAGTGCCTTGACCCTTTTTGATAA ATATCGTAAGTCAAATTCCTTTTACAATGACAGGTTTGTGCTGAGAAATT GAAGTGAAGATTTAGAAAGCTCTCTGATCTTTCAACAACTATTGACAGTT AAGATTTTTGTAACATCGCTTATTGGCCAGGATGGAGTCCTATAAGTTAG CAAGCTTTGACTCCCTTCGCTAAATATCGTAAGTCATATGTGAGggtttt gctttatttttgatAGGTCAGTGAATGATAAATTATGAATTAGCTTCAGA CGAACTCtaatttttcaacataaaagCTTCAGTAATGGCAACCAGTTGTT GTATTTGATCTGTAAAAAAGTTTCGATTTTCAATCTTAATAGGCCGGGAA GATCTGACAAgaatacagtgtgtcccaaaaaaagcggacaaatcTTGTTA ATTTATacgaaattttatgacttgtataCTTAACATTTCAATCAGCTTGG GAATTGAACATCTATTAACTGAAAAGAGAATTTTAATCGAatctctattt ttctttcttagtGATAACAGGCTCTGGAGATACAACAGTAAGAGTTTATG ATGCCAAAGACGGAAGGTGCAGAAAGGTATTAAAAGGACATACTGCAACC ATTAACAAAATTATTGTAAGTATTTTTCAATTGAAATCTTGAAGTTAAAC TCTGTGTATCTTGATAATACTCTAGAGTAAAGTTTTAacttaatttttca aagttttagcTTAAGGATAAACCACTGACACCGCAGGCTGAAGTCGTTTA TTACCAGATGATACGATAATTGTTGCGAGATAACACAAGTTTTTTAGACT ACgaaagaccttttcataaattacgttacgaatatcacttgcctcgtttt aaaATTATTGCTATGGTGACTCCCGGTGGGAGAAGACTacttctattcat aaaaaaaatcaattaataTTGGTAATAGGGTAcaatggtaattgtttgaa tacgaggctagcgatgttcgtgacgtaatttgtgaaaaggtctatttgcc CATTCTATTGCTTTTTGCTCATTTTTTACCTTGTTTGAATTAGTCGCTTA GGATGCTAGACTTCTGGGAAACGAAGAAAAGCGTCAAGATTAGGTGAAAA TTGCAGAGAGGTTATTTTGTCTCTTTTGTCTCTTTGGTTGACAAAAACTG AtaataacttttgtttttgctaGGTGAACGAGCTTGAGGAGAAATTATAC AGCGCATCAAATGATAGTACAGTCCGTGTATGGAATTGGAAAACAATTGT CGATGACATTACTAAATATTAAACCAAGccagcaaaaaacgttaaataTA TCTAGATTCCATGCCATTCCAATGTAGCTGAACGGGCCTTGCTTCGAAAA ATCCTCAGTAAAATCTGGTACACCAGCTTCTATGTAGTCCCTCTCGTAAA CACCTCTATCTCAAAGCCCCGCtgaaactttttcctacagTGGCGATAAA AATCTCGGGCCTTTCCTACAGTGGCGATAAAAATCTCGATTGAAATCACa attgggataaaaattccattgttccaaggttaaaaaatccagtggggctG GTTTTGGTtttctaaacaatgaatttcgaatggggatgaaatcagaGTCA ATTTTTCAGtcgggctgaaattctagggtatttttcccaccggggacgaa atttttgccaaattttgtgAGTCTGTGACATAGGGGTGTTCGTAAGAACG TGTTTATATTCAGCATTAGGTTTATAGTCGTATTTTAACGGTAGTAAAAC AGCTTGGTGTTTACAAACCTTTGCATTGAAACTTCTTGAAGAATTTTCAA GTCTGATTTTCGACCTACTAATTATCTCAAGTTTAATAAGGTTAATTTTG ACGATGAGCAAAAGTGGAAAGGTGATTCTTGCAGTAAAAAATCACATTGT TGACAATCGCCCAGCGAATTTTACCAAAACTCAATTTTTCACACTTCGTT GCGTTgagttttatcaaaattattagAAAAATTAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071653TCONS_00071653Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071653-proteinTCONS_00071653-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_63supercontigscaffold_63:420430..424315 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06 0 0.07 0.12 0.03 0 0.11 0.03 0.02 0.04 0 0.04 0.63 0.47 0.06 0.09 1.15 1.11 2.52 1.01 4.84 4.24 0.29 0.64 1.3 2.13 0.09 0.4 0.07 0