XLOC_044460 (gene) - C. hemisphaerica

Overview
NameXLOC_044460
Unique NameXLOC_044460
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_61:21693..26390-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044460 ID=XLOC_044460|Name=XLOC_044460|organism=Clytia hemisphaerica|type=gene|length=4698bp|location=Sequence derived from alignment at scaffold_61:21693..26390- (Clytia hemisphaerica)
AATATGGAAAACGAAAACGATATTATCTGCCAACTAAAAGGTAAGTAACT TCTTTCCTTAAATTGAGCAAGCAGGTGACACTGTAAAGTCGCAGAAAAGA TTAGTTGTTATTATAACGAGGAACAAGAAGTAACATCTTTTTTTTCCCTT CAAAGTTTTAGCTTAAAAATTTATCAATTTATCATTTTATTACAATTGCA AGCAACAATATTACAAATGTTACAAATGAACAAGATCCCATTAACCAATT GAGAGTAAGTAACTTCTTTCCTTAAATTGACATGGCGAGTGAACACCATG ACACCAGGACTCCAAAAGGCAGCAAAAAACAAATAAACGCTCAACAAAGG AGACAACTCGAACAAATGGTGAGTGAACAACAGGACACCATAATGATTTT GTCTTAAGATTTTACTTTCTTGTCTATGGTGGTCGAGGCGAGCTAATTTA ACAGCAAACAAGTGTGTTTTTATTAGCCCAAACACATGCAAAGTGAAAGA GTTTTTACCGATGTAACCGATTTCCTTGTCTTGACTTAGACAATTTTATT CCGACGAAAAATTAAATTTTCGCTATCTGAAAAGCTACACATTATTTAAA ATAAACAAAACTCATTTCACAAAATTGGTTTTTTAGTCCAAAAATTAAAA TGCTAATAAGTAGGCATCCTTTTTCCCTCGTAACATGACTATGGGTTGCT TCAATCGTGGAATTAGTGGAATAATTTGCGATAAAAGTTTTGTTAAACGG ACTTTTCCCGTTCCGGTCGACTTCCGTTCCACATCAAATGTAAGTTTTTC TTTAAATTAATTAAAATGCTGATAAAAATGCATCCTTTTTCCCTCGTAAC TTGTCTATAGGTTGCTTTAATCTCAAAGAATTGGAAAAGTAATAAATAGT GGAATAATTTGTGGTGAAAATCTTGTTAAACAGACTTATAACCTTATTTT ATTCCTGCCTGAAAACCAAGCCGCAATCCTCGAGGAGGCGGAATTGGAAT AGCAGGTCAGTGATTTGCTAAATGGATTTTTTACAAAAATTTGCTTTCAA ATATAAGGACTCTTTCCCTACATAGTGCTCACAAACAAAACCTTTGTCCG CTAGTTTTGATTTTCCTTTTAAATTTTTTGATTTATTTTCTTTTATAACA AATACCCCTTGGAATTACAAAAAAAAAGCTCTTATACAAACTACTTGGGA AGGAAACTATTGCTTTTAAAAGCAAACATGTACCCGATTCGCCTATTTTA GTAAAAATTAGAAGTCCTTCTTTGTTGTTTATTATAAGTAAACTTTTCAA TCAAACTCCCTGTTTTTTAACTTTAGATTTTTCTCATTATTTTATAGGTT GGTGACGTTGACTTTGAAATTATAAGTTAATTTGATATAGTCTGTAAAAT AGGTCTGTTTTAAGTCACATAAGTTAGTGACTTTGCTAGGAATCCATTCA ACAATCCATTGTGGATGATGTAAAAGTGCGCTGGCCTTGTTCCCCATGGA TTAATGCACTAGTTCGAAAAATTACGTGTTACTGTCTCGCAAGCTGACCG CAGTCTAAACCTACGCTTACACAATTCCAGTGAGACGACTCCTAGACTTC TCAATACGGAACGGGGAATCCTCTGTTAAGACATTTATAAAGCAGTGTAA TTTTGACTTTGATTAAAATGAAAAATGTAAAGAATATTGAAAACCATATT TATTTTCATAGTTTCAAGGAGCAGAAGGAGCAGAAGAAGCAGTAAGAACA GGAGAGAAGGAGCAGGAGAAGCAGTAGGAGCAAGAGAGGAGGCGGAAGAA GCAGTAGGAGCAGGAGAGGAGGCGGAAGAAGAACCGGTTGGAGCAGGAGA GGAGGCGGAAGAAGAACCGGTTGGAGCAGGAGAGGAGGCGGAAAAGGAAC CGGTTGGAGCAGGAGAGGAGGCGGAAAAGGAACCGGTAGGAGCAGGAGAG CAGGTCGGAGAAGAACCGGTAGGAGCAGGAGAGGAGGCGGAAAAGGAACC GGTTGGAGTAGGAGAGGAGGTGTTACCAGCTATAGCTCTTCCCACAAGGG GCCGCCCAAGACAGATTTAAAACGAGAAGAGAAAAAGAGGTCAAGGAAAG GCTCGTCAAATTGGAAAAAGAACGAAGACCCACAAAAGTCCGGCCAATGA TAGGCACTTACCCTTGACCAAGGGACGGCAAGGGATGGATCAAAGAAATG AAAGTGGTGGAGTTGAGGGAAGAGCTGCGTAGAAGGAACCTACCGATGAC TGGGCTTGAGTTGGTCATCATCGAAAGGTTGCTGACCTACTGGATAGAGA ACGAGATGGAGGAGGAGGAACATGAAGACAGTAAGAGGAAGAAAAAAGAT TATTATGATGATAATGATAATGATAGTGGTGGCTCCGGGCCCAGTGGTAC GTCCGTTTAATTTAATTCTTATTATTTTTTGTTTGATATTTTTTCAAATT ACAAAAAGTAAGTCTCAACCGTGTCCATGGTTCAAAGTTTAAATCAAAGT TTAATGAAGGCAATGTAGAAACAAAAAAATAGGAAAAACTAATGAACAGA TTTTTAACAGTCCAAAATTCTTTCGAAAAATGAGACTAATCATATTTAGC AAACTGTAATTCTAAGTCTTTGTACAAAAAAAATAGGAAAACTAAGGAAC AAATTTTTAACAAAGTCCAAAAAACCCTATTTTTGGGCATTTTAAGGCCC TAATTAGCTCAATTTTTTCTTTCGAAAATGGGCCTCCATCACATTTTTCT AATCACCATTTTGCACCTTTGTACCGAAAATCACAAAACTCCTATGATTC AATCCTGAGAAAAGTTGGTAACAGATGAACAGACGGACGAACACAGGCTA ATTTATAGGACCTCCAGGTAGGTCCAAAAATGAAATAAAGTATAAAAGTG TTACCCATTCAAAGAAATAATTTACAAATGCTTTGCTAAACTTAACACAT TAAACCCACTGACAGAAAAGTTTTTTTCGAAACCGTTTGGGCAGCGACAA TACGAGTATCCAGAATAGCAAACTTCCACAATGCTCCTCCGCTTAAACAA ATAAACGAAAGGGAAAATCTCTCGGAATTTTGTGAGTCTGGAAGCCAACT TGGATTACAATAACAAACCAGAAAGCGTGATGCGAAATCCATAAAAAAGA CTACTTTCTGAGATCTTTTAAAACCCAAGAAATTGAGTCACAGTTTAAGA AAAACGATTAAAATTTTGGGTAAGGAAAAATGAAGTCTTCTATTCTCTGT AGGTTCAGTAGTGAAGTATCTCAATCTTGGTAACCATCTGATAACCCCTT TAAGATATATGCTAAGGAGTTTTAGTTAAAACAAATAAAAGGGTGCTTGC TTGTTGTGGACAGAATTAGTAGAATTTTTGGCAACTAAAAAAATCATTAC ATTATCACATCACTTAAGATCAATTATCACATCACGTAAGATCAATAATC ATCAAGAATTTTGTTTCGGTTTAGGGTGAAAACCTTGCCCAAATCCTCGA GGAGGCAGAAGCTGAGGTCAACAGTGAGCAGGTTAGTATTCTTACTTTAA GTACTACATCGTCAGTGAATCATTTATAAAGCAGTGTAATTTTAACTTTA ATTGAATTGAGAAATGTAAAGAATATTGACAACCATATTTATTTTCATAG CAAAGCAGAAGAAGCAGGAGAGGAGGTTGGAGAAGAACCTGTAGGAGCAG GAGAGGAGATCGGAGAAGAACCGGTAGGAGCAGGAGAGGAGGTGTTACCA GCTATAGCTCTTCCCACAAGGGGCCGCCCAAGATGGTTATAAAATGAGAA GAGAAAAATAGTTCAAGGAAAGGCTCGTCATATTGGAAAAAGAACGAAGA CTCACGAAAGTCTGGCCAATGATAGGCACTTACCCTTGACCAAGGGACGG ATCAAAGAAATGAAAGTGGTGGAGTTGAGGGAAGAGCTGCGAAGAAGGAA TCTACCGATGACTGGGCTTAAGTTGGTCATCATTGAAAGGTTGCTGACCT ACTGGAGAGAGAGCGAGATGGAGGAGGAGGAACACGAAGAAAGTAAAAGG GAGAAGAGATTTTAATGATAAAGATGGTGGAGGTGAAGGAGAGCTCAGAA GAATACATTTGAGAAGCAGTGGGCTGAAAGCGCAGCTAATCGAATTATTG CTGGCCTATAAGTCTTGTTTGCTCACTTGTTTGGGATCGTACTTATAAAT CTTTCAAAAATAGTTAGGATTAGTTAATTTTCAATTCATTTATTTTTTGT GTCCTAAGTTCCTTTTCAATTTTGAGTTTGATTTTTCAATGCTATTTATT TATTTCAAATTTCTAAAATTCATTTTGGTATGTTTAAAATCGGAATATCG AAAAGGTTTTGTTCTTACAACAACAGAGGATATTTTGGTTTGAATGTTTT TGAGAAAGGAAGTTTTCAAGCATTATAATTTACCATTTTAATTTAAGCAT TTGAAACAAAAAAGCCTGAACTCTTAATCGAAATTGAACTAAAATGCTCT TTTGTAATTGTTGAAAGTCATTTTTGAGTGGAACACTTTCTTAATAAAGT TCACGTTTTCTTAAAAAAAAGATCATGAAAATGAAAGATGAAGAAAAAAT CACATTCTGGTAGAATTGTTTACCTCGTTGGAACTAATTTTTGCGGGTTT TAATTTTAGCGTTTATCGCGGTTTTTCGTCAAAACCGCAAAAATTAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071562TCONS_00071562Clytia hemisphaericatranscript
TCONS_00071561TCONS_00071561Clytia hemisphaericatranscript
TCONS_00071560TCONS_00071560Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_61supercontigscaffold_61:21693..26390 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.4 0.29 0.71 0.77 0.76 0.33 0.22 0.52 0.13 0.23 0.34 0.19 0.22 0.11 0.25 0.21 0.29 0.16 0.25 0.22 0.12 0.17 0.1 0.16 0.55 0.43 0.37 0.06 0.13 0.18