XLOC_044312 (gene) - C. hemisphaerica

Overview
NameXLOC_044312
Unique NameXLOC_044312
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_60:1403644..1410297+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044312 ID=XLOC_044312|Name=XLOC_044312|organism=Clytia hemisphaerica|type=gene|length=6654bp|location=Sequence derived from alignment at scaffold_60:1403644..1410297+ (Clytia hemisphaerica)
ATAAAACGTAACAACTTTTTTGTTAATAACATAACAAACTGCTAGTTAGA ATTTGTGAGAAAATTAACAAGTCAAATTTCGATTGAGAGTAGAGTTCAtg tgatatttttttgtaaagttCTCTGTGATAATTTTGGTGTTCAAAGATGA CTTCGATGTTAGATAGTTATAAAGAAGATATCTTCGAAAGCTCCTACGAC AAAAATGACGGTAGGCAATGTCTTATTACTTTTTAACAAACGTAAACAAG GGTCGAGGCCTTTAACATTTATGAATATAGAAGATGAACAAGCCGGAACG CTGATTGGATCTACCTGATGATTAAAGTTAGAGCAAGTGGGGAAGTGTAA TATAGTCGAGTGCTGGAACGCCAAGGGTATAATCAGTAATTGTTCGAGCT ACtgaaattcgagttatagaggcaGAATAGCCTAAGAATCAAGAGACCGG AAATTCGTTCGAGTTTATGAAGATAATCGAGTTgaggaggttcgagttat gaaaagtcgactgtagtttaaggcgatAATGGAAAGGATcgtgaaaaaac aacgatcagttttattgacaattgaatcatgcttgatgatgGGCATTGTT TGAATAATATATTTatgagaaaaaacaaagaaatactaggaaaaagtcca aaggaaatctgcaaaaacggcgttTTCCGGCACACTTctaaaatcaggct ccgtcacattttagatatTGCTACTTTAcaccagtgtgcaaaatttcata aaaatataaaaagtacatctactcgagaaattcaagtgaaaccgtttttc cggcgattcTAGACTGTTCctgcgatttttagaaagttctggcttcaaaa atcagttttattgacaattgaatcatgcttgatggtgggcattgctataa ATAAGGTTTTGAACAAAGAAATattaggaaaaagtctaatgaaaatcagc aaaaacggcgatttccggcaaaacgaacgaacgaacgaacgaactaattt ataggacctccatgTAGGTCCAAAAGTAAAAGAATCCAATTCTTGGAAAC ACGCTTTAAGTTATAGAAAGTCATCGctgttaaaattttaaacatttgtc TTGGTTTTTGTTAAACGTCTTTAAGATTATCTTATAAAGTGACCTGTATT AAAAGTTACAGCTACTGTCTGTCTCCGATACTTATTATTTTGAGCCACAT TTTTAATTAGCCTTACACATACGGAATCAGTATTACATGCCAATAAAGGA GAGatgaattcaaaaagtcaaaaagttttgaaaattacaacCAGTGGAAA GTTGCATGAATTTGAGTCCTTTTCTATTCCCTAGAAGTTACTCGAAGTTA ACTTATTTGTGAGCAGCGTTTGAGCGCATGGAAGAAGCACGTTATATCTC TATAGAAACACTAATGAGCttataaaattcaataaatcctCATCATGGTA TTCTTCAGACGTGTTGATAAAGATATCAGATTCATAATCTTTCActcttg tttttaaagaaaattcatgCGTGCGTGCTACTTTGCTAAAATTGTAAGAA AAAGAATTTAAGGCTGCCAAAGTGTCAAAATTACTTAGGAATATTATTTT GTAGTAAAGAAACTGAATTTCATAATTATCAGGGGTGATACTTTACAAAC AAgatattaaaaacttttaacaagAAGCATAAATTTTGATAATAGTTTTG CTGGTTCTGTGAGTACCCTATTTTGGACTTCCCGCCTTGCGCTTTCGATG TATAAACTCACGACGAAACTTCTAGTGGAAAGACTGAGGAGGAGGAGGCT TTACACTTTCAAGCAGCTAATATTATCTGAAGATTGATATATAATACTCT TTTCAGAGAATTCAACTCTATGGTTATCTAGATAGggcctttaaaatttt gatgcaCCTGACATTGCACCTCAGGCTTTACTCAAGAGTGCAGAATTGGT AAACAAAAGGGAGCTCgaatttatatatttatatatttgaaggaaaattg aattttttagcTAAGTGGAAAATAAATACAGCTAGATGAAGATTAAATAT TGAGAACAAAGTGTAAAATCTCTAtcaagaatacacgtttttttaaagca cattcaaaatttctgagaccttcagatgttcttaacgtattgtattttaa gcataaatatgttcttaaaatgttcttattttcacctttttctgagtatt tttgcccaATACCTTACAAGCAATAGGGTGGTTTCAGTCCGCAACGCctg ttaaaatgttcttaatttgttcttaatattttgcccaccgaagccttatg ttctcatatagtttgttctcataaaaaaacgtgtaacactTATGAAAAAC GGTGGAATTTTTCactcaattttcaaattatcaTATAACACGAGACCAAA AAGATGATCAGCTTTATAAAACATCGGTTAgaccaatattttatataatt tttttcataaaacgtTTCTCATTCATTTGGCTCTCGTGAATTTAATCTGT CTAATATGTTTGAGCGGTTTTAaagtgatttatttttgatttattataaC GACTTTTAGGTCACACAAAtcttaaaagaaagttttgagaCAAAATAAGG aaggattttcttttcaacttaACAGACACAGAGCTTCTTAGACCTCGTGT GTCGAGCAGAGATTTAAAATTCATGTTATATCAGGTTTTCACTTGATATC TGGTATTCTGATATTATCGGCGTTAGATGGACGACTTTGTTTTGACGTCT TTTGTCCAGAATCATTTTATAATTATGAGCTTCAGGGTTCAGATTAAAGG GAGGGGATAAGTAAATGGCGGAGGCGGGTCTTTAATAATGTATGGTTCAG CATAGATGTTATGCAATGAATATGTATATATTATGAATATTCGTCGTTGG ATTAGAATtattgttttaaagaaattCACGCGAGACACTCTGAAgatctt tctttaaaaaaagaacttttgcGATAAGCAGTGTAACTATTTTTTCGACT AGATTCGATTACCTCGAGATTTAATTGGTTCGATTCGATCGAACATCGat taaattcaatcaaaataatAGAATAAGTTGGATCGAGTTCCTTTTAATCG ATTCTTTTCGATTATTACTGAGTCGATTGACATTAAAGTTCGATCGCTTC GCTCGACATTTCCTGGTACAGTACTAAATGTGTACGGTTGTTATAAATAT AGAAAGTTTATCACCAGATATGGAGAATTGTCACctgcacccgactgtct gttggaagcattacgtaatggttTTTTTCCAAACCTTTATTACACTTAGa atttcatttgacttttaGAAATGACAACAAGTTCATTGGAGCCAACGAAC GGTGGGCCGCTAAATAACACGTCATACAATTCTTATGTTGACTTGTTCTC ATGTGCAAGCTTAAGAATAGCTGAGGATGATTGGAATAGCCTGGTCAATT CAGGTAAATCAATACTTatagtctttttgattttttttatcttttcagac taaaaattttttccaaaaaaagtcaaaaacctGATTAAATAGCGTTTTAT GATTTCAAGTTTCAGATGAGATGAAGTTTTTATATAATActttttaataa ttggtcatttgaagtaataaaaatgacgcgttctttagaaaaagtaacaa aattcttttattactggttaacgaccaaccaaatcaaataagagcttgta aaaactccatctcgtccctgAAGTTTAGAAGGTGCAACATTCTCCTTCCC CTCACTTTAAACGGTCACCGGGACCCATCCCATCCCCATCCCGACTCAGA AGGGTGTACAGAGGTCATTTGAATTTTGACagaaaagcaaaataaaagga CAACTCATGCCCAAAATACTGTGTATAATAAAGTCAAAGCTTTCAAAAAT CTCGCCGCCCGTAAAATCGTTGTCATCGATGAAGATTTCTCtgtcagtct gtgccactaacctgcactaactcgatcgggaagattcttccgaaatggga aaattcttccgaaatgggaagaaccttcccgaacgggaaattaacttGAC ACCCAAATGGGTAAGAGTTAAAAAACGGACTTCCAGATCAGGAAGAAGcg ggaaaataaggaaaactcGATCGGGTTGGAACTACCCGTTTGGGAAGCTT ACGcagtttttttcacaatttaacaagatttccacggtaaagtttatttt tcttttggtgaaaatccttaaaatttgatgctatttcacctccaaaaagt ttcaactttcgccggtcatcgtacagcttcgccgaagattcagtcaattt tcaacttcccaaaGAAGAAGAATCTTCCCAAACGGGTAGAAAAAAATAGA GTAAGTTCTTCCCGTTTGGGAaagttcttcccatttcggaagaatcttcc cgatcgagttagtggcacagtaATCTCTGTAATGTAAGGAAATATCACTA CACTGCCTATAAAATGACTTATTTGCTTGCTTTACAGACGTCAAACTTGC GGTACAAGTTGGACTTTTATTGCTGAGGaacaacaaagaattggaaacag tTTTAGAAGTCACAGAGAAACAGTTTGAAGAACAGAAATTGAGAGCTGAT GTAAGAAATATGCTTTATTGTTAAATCTTTTGGTTAAATCTAGTGACAGT GAGTCCTTTCATTGAAACAATGACTTTATAACTCACATAAGTACAGTATA TACAGCCGATAATACGACACGgctaaaatcctcaaaattatttacttatt tatgaCGTATTAAAAAAGGGAGCTACGTAAAAATATAAATCTGATTTCCA AATTCTGATTCCCGTATTCACGTATTCGGGACTTGAGTCAAGTAAGTAAG TCTGCGACCGCAGTCGGAGGCGACCCGAAGGCTCCTCTTTCGATAGCTAT CCACCCGaaggtaggggagggcgccactctttctccctggatttctccac ttacccttgatccttctcttagttgctgagcatcaagcagagaggcataa agtaccattttgggaatctttggtatgacccggctgggggttgaacccac aaccttgcgaaccgtagccggatgctccaCCATTGTACTACGGTCGCTTG AGTCAAACTcgaactcgaacccagtcctttTGTAcgctttttcatgattt tgatagcGCTCACAAAAGGTTGTATCACGTCCAttagtaaaatcaaaaat ggcTCTGGGTGAAACCAAAATGTGGTGCAAGtagctctgggtacgagatt ggaCTTTAATGATATAATTTCTGTTCTAAAGACAAATATCAGAATCCCCt gtcaacaaatattttataagTATCAACATACCTGGTGATCTTTAGTATTT GGGTGCAACCAACTTTTATTTCAAACCCAACAAAAGCTTGCTCTGTAGTT CCTTTCTTTTCATCCCAAATGATAATGGATCATCAGATATCAAttcaata attttatttttattttaacaaatttttattAGTTAGAGcactgaaaaata gaaaataaaatgataagattttAACATTTAACTCCTTTTCAGCATTATGA GAACCAAGTCAAGAATTTGAACGAGTTATTGAATCAACAAACAGACGTAT ATTCATCCCTAGAGACACAAATTCTAGACCTCTCAAATAAATATAAACAG TTACTGGATGATTGTGGGATTTACAAGAAAAAGAATATCACCCTGTGGAG GAGAGTGGAGTGGCTTGAAAAAGAGTGCGAAGAATATTTAGAAGAAATTT CATTCCTGAAAAAGGAAGACACAAACTCCATCGCGGAGGAGAGCTTAGAG TGTCTCGATGACCGCACTCCTCCTTCGTTTGAAAACTCAGATAAAGTAGA TACTAAACTGCTAAATCGCTTTGAATCGATTCTTGAAGAAAACGACTTAT TAAAAGAACGAATTTTGGATTTGGAGCATGATAATTCAATATTAGAGGAG GCGATACAAAGGTTCGATAAAAATTCATCTGAGACAGGAGAAACAAAATT ATCGAGTGTAGAAACTTTTTATTATGCATCGCCTGAAAAGAATTTAGCTG TAGAAATAAATTCACAGTCTGGTGTGAAAGCGACACCAACTTTACAGCAT TATCATGAACTTTTTGCTGAGATTTTCCAGAAAATCAAAATGACACGAGA TGGTACATGATCAAGTCTTGAtggtttttttaaatattactAACAATCAA AATAACAGTTCTGTTCAATAAGGTAAGATTAcagtgtgtcccgaaaaaag tatcgagtcatACCATTTCTATAGAAAggaagttcttgtgtgtgttccAT TAAATtggcaatgtttatcaaagtttctctttgTGTCATATTAATTATCA TGAGACATATTTTATgaataatttttacaaaaaacaattctcaataactt taacgtcctgaaaattgtaaagaaagttaattctttttaatcataatgac tgttaaacaattattgtgttggtatatGTTTTCTTGCACGGAACTCGAGC TCGAtcctttttttcgggacactttaaactttaaacttttttgttttcat tcaaaatgaccggttgccaattggagaattagagaacaccCGTGtgttcg caaaaaaaaaaacacaagagaatttataaaaattatcCTCACACTTGAAA TTGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071305TCONS_00071305Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071305-proteinTCONS_00071305-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:1403644..1410297 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.94 1.5 1.89 1.47 1.66 1.15 1.84 1.1 1.06 1.06 0.32 0.64 3.04 2.25 3.74 2.55 2.97 4.35 2.27 3.28 3.46 3.74 10.92 10.47 1.57 2.55 0.68 1.11 3.4 5.35