XLOC_044271 (gene) - C. hemisphaerica

Overview
NameXLOC_044271
Unique NameXLOC_044271
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_60:46718..54353+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044271 ID=XLOC_044271|Name=XLOC_044271|organism=Clytia hemisphaerica|type=gene|length=7636bp|location=Sequence derived from alignment at scaffold_60:46718..54353+ (Clytia hemisphaerica)
tcaggataatctaaaaacaaaatactGAAATATATAAAGAAAAATGGTGG AAATAATGGAAAACATAGACGAAGTCCATCTTTCTTCAGATTCTGAAGAT GAGGTTTGTTCCATTtaaatttaacaattttttcatagtgcaaattgaat ttcttttgagGTTCTTTTGAGTATAAATTTTCACCCCTCCTGCAAGGTTA ATCAAAGGGATGTTTCTAATATTCTGCAAAAGCTGTTCATATTAGTCGCA TTTCTCGTGACCACTCCGGTCGTGTGTTGACTTTATTACCTTTTTAGGTG CTTGCTTTATATCTGAGTCGGGAATATTTACTTAGTTTAGTTAAACTTTA ACGCCATGATGGGGCATATTCGGGTTAATCTGGCGCTTTAGTttcctcag cgcgggtatgacaatttgaatcacaaaacctttcaataccgcccgccgat tgaacctttaatggcttacttaatgatcGCTATATGAATAATAATTCTTT ATTACTGTGATATGTCGTTCTTTTCTGAAACTCTAACTACCTTCTAAACC TTTAGGTTGTTgataaaaagacaaagaagaaaCAACATAAAAAGTTGATG AAAGATATCGAGACTTTATCAGGGGCTACCAAGAAAAGGTTTGAAACTTC TCTCTGAATTTGATTTGTGTAACCATAGCTTTGATCTAGATTAGAAAGTA TTGTCAGCTATCGACTCATCGCCCGACCCGAATCGGAGAGAGAGAGATTG TCTTTTACACGCCTACCTGTTTCAGATCAGGGTGAACCTCAAACTTTCCA GGTGAAGTTAACTTCACCGCCAGCTTTTGAAAGGTTTACATCGAGTAATC CTAagcttttatttcatttttttatttaaaactttCAGATCGAAGAAGAC GAAAAGAACTGAGCCCACTCCGGAGATATCTGAACATGCGTGGACGACTG GCCAAGGTTTGTCAACAATCCGCATTCTTGGTTTAGTTTCTCATTGATAA AATAAAAGGAATGATCCATCCAGTAATTCAATTTCTTCTTATGCTGACAC AAACTTTCAACAGCTTAAGATTTATCTTTATTGATCTTCAGACTTGGAGG TTTTatttcccgtttcatatcagacacatatttcatatcaggatagTGTC TGccatattgttatattgtgctgatcttgacaaaaaattttttcttttcc tctttttgaccaatcttaaTCCAattccgtgtcaatccaatgttaaaaag ctattaaaattgatgagtaagcaaactgaaaataaaacctttaagaataA AAAAACAGTTCAATACAAAAACTCCCAACTTCTACATCATCACccacaac actcattaaaataaCCCGTGCGTAATATGAAAGTCTTGAAAGTGTCAAAA CTTTGTATCAAGGAATGCAATTCATAACAAACAATGATATTGCagcaaaa tataaacaaaaaatataaaacttttatTTCTTCTAGACAGAACAAACAAA GTGAATCTAAGCGACTTGGTTGGTTGCTTGAAAACTGATACAAAAAAGAT TGCTTCAATGAAGAATCAATTGGTAAGAATGTAAACCacattgacatatt ttgagaaagatcTAAGCTGGATCATTGGACACCTCTTTCATTACCATTTT CATTGATCCATTGCTCAAAAATTGCAATAAACCAGAGACCGGCGCTACAG ACAAACTgtgatgaaaaaatgaattatttCGCATCAATCCACAACACTAT CCCTAGCGATTTTCATTCCTTCGAAGCATATTTCAAGAACCACACAGTAT ACACCAATCAACCCTTAGGTGCGGTCAGCTTTTGAGAAAAACGGCAATGA ATTAACAACGAAATTGATTGTATCGAAAACAAAAGTTTAGGAGCGCTCTT GTGAAAAATGCAAGTCAATTTCTTAAAGCTATTCGAATGCGCCGAGGgaa attttccttgaaattcATTACCAGGCTCCTCAAAAGCAGACCGCGCCGCT AAGAGTTGAGAGGTGTATTTCACTGGTCTACTAAAACATGAAGATTTTAA CCTCTAGCTTTTATCCTTTTTTACCATAGAGGACGATGGAAAAAAGTAAG CAAGTACTGGAAAAACCACTGCACAAACCAGAGCAACAAAGGGTGAGGAA TATTTTCGAATTCATCAATTCGTCTCGAAAAACTGTTCTTCGTTGGAAAG CTCGTCTATAGTAAGCGTACAGTAAATAAATGTGCAGGGTCGAAAGTTTA TATACCTATGAGGAATGCTTTTGTCGAACAGATAAAATCCCAAAAGTCAA AGATAGATACTTTAGCATCAGAAACCAAAGTGGTTAGTTGAAATTGAGGA CCTTTTTTGATCATTTAGTGACCCGAGAGTAAGTATTAGGAAAAGTAAGC TTGTTCCCATTAGCTGAATAGAATTACCATAGTTATTTATCGGTTTTTAT CATGAAACAATTTCATTTATTCCATTTCTCGTTTCTTCTTCACAGGTCGA AAGACGAGTTGCGTATGATGAGACGAAAAAAGACATCAGTAAATGGGACG AGACTGTTCGCAAAAATCGAGACGTAAGCTCGTCATGTCATTCTTGATAA AATCGCTCTTCTGGATAATCAGCGTTTATTAAAAGGAGCGCACAACATTC CCTACCCCATCCGATCATATTTGTTTTTGAtgtgtaccttaagggaagaa aatttggcgggaatttaattttgcggatgggtgaaaagttttttcagagg ggaTTTAAATTGGCGGATTGCTCGAAAAATTAAGTtcggcgggaatttaa tttgacggatgAAGAATATGTTTGGCCAAAAAACGGtattaaaaattaga aaaaacctgtttcaaGGCCTGAAAGCACAAACTTGGGGAATGAATACAAT TATTTtaatttgacgggaatttaatttggtggattgtGGCCAAaaccgcc aaattttcttctcaccaaaatttcttcccttaaggtatatcaCTGGTATA AAACTTTCTAAGATTTATAAATGTTCTCACATTTTAGGCAGAGACGTTAA ATTTTCCGCTGCAGTCTTATCAAGCTCCAAAGCAGACGATAAGCACCATA TCTACTAATTTCAAGGTAAGCTATTTTTATCATGTATagtatgaaaaatt taattttttctctaaacctaaaaattacaaaaggtttccgaaaatttatt ctttcataaAGAAAAACGATGCTATAGTGAGAAGGTCACAGTCTCTCTCT AGGTCCTTCTGTCTTTACCATGCCATCATGAAAGATAAACTTTATCATCC ATTCTCATCAAGCAATTTCAGATTTataaacaaaatgacataccctatcg gccctttttacgccggctctTATTGGCGTCATTTTGACCTGTGTCGGGAT TAAGCCGGCGGCATGATAAGGGTCGGGGTGATATAGAcaacaattttgaa ttttttaacttttgaagaaGATTAAATTGAAAAGGAAAGTACACGAAAAG CATCGATCTTCAATAAAATGAACATCAGTTTACCAATCAAAGTATGATAT TTATGCCAATTTTGAAGCctgtttaagtgattttctcaaGGTTTTGGTAA TATTTACGGTTTATCTAAGCTCAAATTTGAGCAATAGTTAGAGCCGGCGT TAACTTAGGGCGGGTGGTAATTTAGGATTTAGGGCTTTTATCAAAAGCCC TAACGTTCTTCTCATCGCGAATAAATTTGTCTATATTGGTTTCGCTTAAT TTTTTGATAGGCCGGCTAGTTCTTAGTGCTTCTCAGTGTATCTATTACCA AAGATTAAATTTTAGACCGAATAGATTCAATGTTTTGTGACTTGGGCTAC CTGTTTTTCACcaattatctttttaacttATTTAGCCTCAAAATGACTTA GAACGTGAGATTGCTGAAGTCTTAAAGGGCAGTCAACATCTTTTGGAGCG TAAAGACAAAGAACTCACAGAACACGAAGAAGAAGCTCTCAAAAATTTCG ACTTACAAGAAGCCCTGGAGCGGAGAAAAGAACTTCAAAAAATGCGAGCC TTGCAGTCATATTATGAAGCCAAGTGTCGAAGACagaagaaaatcaaaag taaaaagTATGTTTGTTCATCAAAATAATACATCAGAGGATGGGATAATG TTTTGATTCCTCGGATTCTGCCTTATTCATCAGACAGACGCTTTTCCCGT CAGCGGCCGAAACCTAGGCTAAGTCATATTCCTTCGCTTCAagtgtaaaa ctcctactcCTTCTCAAGAAGTAAGGTCAGGCTTTTGAAGCTGTCGATAG TGTAGACTACCGATACCTGTTTATCTGTATAAACAAAATGACACATCCGA GGGTGGGATAATCTTTCGAATGCTTATTCCTCGGGTTCTACCTTATGCAT TAGACGCTTTTCCCGCAAGCGGCTGAAacgtaggctacgtcatatatTCC TTCGTTTTGAATGTAAAACTCCTACTTCTTCTCAAGAGTAAGATCAGGCT GTTGGAGCTATCTATAGTGTAGACCACCGAAATCCTATTTATGGGTAGAA GCTAAACTCCATGGCCAGTACCGACTTTATGACTCATCACTGTATGACTT TTCCTCCCTTTCTTTAGATATCACCGAAtcttgaaaaaggaaaaacaaaa agcGTTGAGCAATGTTGATCTCGAAAAGCTTTCCAAAGACGACCcagaaa tgtttgaaaaacatttgGAAAAAGCTGAGAAAATGAGAGCTATGGTATGT AGGCTATGAATTGACGTCTCGGGTGAATGGATTAAAAAACGCTACGTTTA CATCTATTTCCATAGCTGGGTGAGACTTTCCTTACCTGGGGTAGATGGCT ATCGAATAAATCTGGGTTGCCCCTGACTGTGGTCGCAAGACTTAGCTTGC TACCAAAGATTTacaactgtttttttttcttaggaAAGAGCGAGTCTTCG TCATCGTAATTCTTCAAAATGGGCAAAGAATGTGATCACCaaaggaaaac aaaataaagaggTTGGTAAACGAGTGTCACCTTAACACTTCTACATTGCA TTCGATTCCCAAATAGCTCAGTATAATTTGCAGTTTCTTaacgaattttt caaaagagtcGGGAAGAAAGTCAAAGAAAGACGAGAGGAGTGGAAACTAG AAACCAAAGCGTTTCGGTATTATACGTTTTCATTTCTAATGTTCTTTTTC TGTCCTCGCTAGGATCAAGAGCGCATTCGTGAGCAGTTACGGATCAGTCG TGAACTGACCAATCACAAAACAGTATCAGATtccgaagatgaaaatgata ttGAAGAAGGCATGGACACACAAACACCTGACCAACAAGAAACCACATTG AAATTATTGACAGCCACTTCCACAGAGGAGGGAGGTAGCTCTAATCCATG GCTTTTAGGTGGAAGATCGAACAGCCAAGGACAAGATGGGGAAGGTATCA TTTTTGTTTATGTCATCATTATTTTAAACTGTTGTTtgccaaatcaaaac aatttctaAAACGCGAATTTATGCTGTCTTGAATTATATCTCACTGCATC ATACAcactaaaatctttttttactttcatcACTGACCTCTGTAAAGATC ATAATGACTCCAATTCTTTTTTGAAGAATTCCCTTGGAATTTCATTGCCA CTACCTATAACATACTTTTCTCAAATTCATCATTCACCAAATCAACCCCC TAATCTGCCTATCTTATGACACACAATCATCCCCACCAAAGTCTTCTTCT TCTTGCTTACAATACTATTCAGCCCCCTAATCTGTCTTTCCTATGACACA CAATCAACCCCATCAAAGTCTTGCTTTTTGCTTGCAACATCATCGTGTTC CCTAATCAGCCTTTCTTATGACACACAATCAACCCCCTTACTTAGAAATG ACTGAAGAAGATATGTTATTAAAACGTCCAAAAGCCATCGTCACGGACGA ATCGAAACAACTGAAAGTTCTTACTGGTGCAGATGACTTGGAGGACGAAA GAAGTTCTGGGGAGGAGTGGGATATTAAGGAGGAGTCGAGCACCGTGGAG GAGAAAAagacgaaaaagaaaaagaagaaagtacCCAAGAAGGAGAAGCA ACCTGCCGATATCATTACACAAATTAAAAATAGCGTCTATTTAAAAGAGA CTGAATCTACTACTGAGTATAAGAATGATAATTCATCAAAAGTGACGGAA ACGAAGAAATGGAATAAACAACAAcagcagaaaaaacaacaaacggCAAC AATGGAAAGTGACGGCATCAGATTTCTTAAGAGCGACTCGGACGCCGTCA CAATTGGCTCTTTTACCGGCAACGAAAACAACAGTGGATCTGATTCTGAc gaagatgacgtcatcaacgaACAACGAATGAACATTCGAGATGCTTTTgc caatgatgacgtcattgaagaTTTTGTTCAAGAAAAAGAAGCGGAAATTG AGAAAGCGAAACCGAAAGCGGTCGATAATGTTTTACCTGGCTGGGGAGAT TGGGGAGGTGCTGGATTGAAAGTCAACACTCGGAAGAGAAAGAGATTTAC CAAGGATCCGACGAAAGAGAAATCGAGATTAGATGACGGGAAAGCCAATG TAATCATCAATGAAACAAGAAACAGAAAATTTGCCAAGCATCAGGTATTT TGCTTACTAATTTCGTTCGTTTCCTTTGTCATATCTTTTGTAAAGCTTTA ATAAATCCCAGAATATCTTGTGTCCTTGCTGAGCGGGCCCTGTGTgggta ccgtattacttcgaataaacgcccccttcttttaaacgccccccctcgga taaacgcccctcctgaaaggaaaattatttaataaacgccccccctctca aataaacgccccctctagaggaggggcgtttattagaaacttttgacttt aatacttcaatacCAGTGTTGATTGAGTTTAAAAAGGAAGTCATTTCTTG TAtaaccagagcagttttcgatgcaattttagtcgttgaaccaaagagat cctgataaagaactaaaacaaagggtataTTTGCAATAAATATCCGActt tagactaaaataatttaataaacgcccccttcttttaaacaccccctgca ataaacgcccctcttaaaatcgaaaaaatttgaagtaatacggtatgtgT CTTTTTTTGCGGTTGTTGCTAGATCAAGGCCAGGGTTTAAAATAAAGTTG ACTTCTAAAGACAACAATATTTTAGTCCTGTTTTTAATCCGTTTTTAGAT TTTGGCTGctttttataaatctttcaatCTGTCGTGTACCTTGACATATT TTAATGTAACAGTGCTTGCTTTTCGTTCGTTTTCAGGTGTCAGACGTACC TTTCCCATACACGAATCGGACAGAATTTGAGCGAAGTATACGGCAACCGA TTGGCGAGCATTGGAACACACCTTCTTCATATGAAAAACTTATCCAACCT CGAATCACTACAAATTCAGGAACAATGATCGACCCTTTAAAAGCtaccaa gaaaattaagaaaaagaaTAAGACAATTAAAAACTAATgaataatttttc tcaaatttttaaagggaaaattttatatatttttatccatttaatgattt aaagaaaaagatGGGTCGCAAAGCCTTAGAAGTacg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071216TCONS_00071216Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071216-proteinTCONS_00071216-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_60supercontigscaffold_60:46718..54353 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
UTP14CU3 small nucleolar RNA-associated protein 14 homolog C Homo Sapiens
UTP14AU3 small nucleolar RNA-associated protein 14 homolog A isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
34.63 31.3 10.02 6.04 45.89 35.6 50.42 54.49 35.71 39.84 31.52 22.58 23.69 24.55 26.75 30.49 37.21 32.82 8.87 11.03 26.76 27.62 69.51 60.57 31.85 35.33 15.23 13.4 56.68 62.18