XLOC_044225 (gene) - C. hemisphaerica

Overview
NameXLOC_044225
Unique NameXLOC_044225
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_6:185222..193183+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044225 ID=XLOC_044225|Name=XLOC_044225|organism=Clytia hemisphaerica|type=gene|length=7962bp|location=Sequence derived from alignment at scaffold_6:185222..193183+ (Clytia hemisphaerica)
ttgcaaacaaaattatggaAAATTGTATTGACAAAGTAAGAAGACCTACA GCAAAATCATAACCATGGGAGAATCCAAAGAAGACAGTGACAACATGGAC GAATATCATTTTAAAAGAAGGATTTTACGTATCAAGAACGTCCCGATGAG CTTCGCTAATGtaagatttatttttttgttatagGGAAAGTTTTATTTCT AGTGTGGAAACTTAGTTGCCGTTACAGGCTGTTTAAATCTAAACTGATTC CTCATTTCCAGTGAAGACGGCTTTCTACGTAATACAAATGGAGGGAACAT TGAATCAACTCGAGGAGGGTTCAACATTTTTGACGGAGAATCTTTACATT TCCTTATAAGGGGTATGGCTAAAAGAAATACTCTACAGGCCCTCTTACAC GGAGCAATAATGAATTAAGATAAGATTTAAAATAATCACGAAACGATAAT ATTATCTTATTGTGTCGTGTATCAAAGTTTAAAATGATAAAAGCACTATC TTGATGACGTCGAAAATCCCATTGTTCCGATTATTGTAGAGAAGTCGATT ATAATCAAACTAGTTTGATTATAATCGACGAGCTTAcgatattcaaaaca aaagaaaggaagaaaattctaTTGATTTGGCtatgtaaacaaaaatattc caTTCATTTGATCATTCAGCTAGTGTGTTTTGtgttgtatttttttgtga aattattaaaaagtgaTAGAAGACACAAGTTCATTTCTCGAACTTGGCTA GCTACGGTTATACGCGTTGTTTTTGTCTCCTCTATTTCGTTGCAATTCGA GGAAAGCCAAGTCAGCTAAATTTTGCTCACGCTATGCTCCTTTCGGTTAC TTAACCGGTTTCTTCGTTGACTTCGTCGATAAAGCCCTCTGGTGTATAAG AGTCGGTCCCGGGGggagtgggtttaccaactgacggtatgtgcggcgaa aaaattggcttttagaatcgcacccttacagtgcagaaaaaaatcgcaat ttgcaatttttcccagatttgctgaaatttccacccttacagtgcatttg tcaaaagtccacccttacagtgcatttctgatattttgaaaaacataccc ttaaccgccgcacatacccgtcggtcaatttgtctgactgcccccccccc ccggggggccGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCGGGGA GTCGGTTGAGATTTCCCTAAGCATATTATGAATAACAAGTGAAGCTAGTG TGATCGTTACAGCCTTGCCAGGGTCAGGTGGGATTTTGGTAAAAAGGATT CGAAATCTACTTGCCAAAATGCCAAATGCATTTTCAGTAACTCTCCGGAA ACGAGGTAAACGATAGTTGAACACGCGAATTCTAAGTGTAAGGCCTTGTT GACTGTAAGGTTTGAGACAGTGAATACCCAAAGGAAAAGCTTCATCTCCA ACAAATACATAGGGAACAGGGACTGATTCATGATTGATGTAATTGGGATC GTTAGAACTTGGCAGTAATCTTGGCTCGGGAATAACTAGATTGCCGCTTT CTAATGCCTTGTAGAAGGAACAATTTCGATTAAAGCCCCCGTCACTAATA CGCCCTTGAcagccatctttttctcttttcttcacttttcttttcaaaag ttcAGCACTACAAACGATCACAAGAGCTGCAAAAGCAGCAGCACAAACCT TCTCCTGCTTATCCATCCCATCCATTATTGTATTGGAGGATTATTGCTCT GtgtatcaaatcaaaaacatttagaaaGTATAATACAGAAAGATATTGAT TATTGTTATCTTTACGtgtatgaaaatgtaaaaataataaattcttaTCT TATCTTAATTCATTATTGCTCCGTGTAAGAGGGCCTTAcgtcataaattt tgaacccCTCTTAAATTCGCCACTGCAACTGGGCGTCATTAGGTGACTAT TTGAACAGTAATTGAGTTGTGCTAATATGTGAAATTTTTATCAACACCAT AGGTTTTGGCGAGCAAACTTATTCATCTCAAAGCAACACAACTACGTCAT AAAGACGAACAACGTAAGTAAAAATCATGTCTGGATTTTGGGATGCTAAG AATTTAAAAGAATTGATATAGCCTCATCTCACTGACCTGGAGAGAATCTG GAAAGTTGCTAGGATTTTCACACGATTTTTGGGATATCCTAGcaacgaaa aaataaatgatatcATCGGCGAGTGCATTTTAATGTGGGAATGTGCCACC TGGTGAGCTGATACTTTATGCAAAGCAAGCTAAGTGCTGGAGTGAAATAA GACAACAAGAATTTCTTGGGTTTTCAAAAGAACCTACCTATTCAATAGCT AGTTTCGAGGATACTAAAATAACATTCCTGTACTccaaaaaacaaccaaa ttCCTATCCTTTAGTATTGATCGAAGTGGTTGGAAATTCTACATTAACCG ATGATTCTATTTTGCGAACATTGAACATTATGAATCACTACAAACAGAGA AATGAGACTTACCGCAAAGATGAGATCGATATCAAATCACCCGTGGTTCT CTTCACCAATCTTCCCAGTGATACGGATGAAGATATGATGCAAATGGCCG TTCAAAAATTTGGTATCACCCTTAATACGGTAAGAAAAAGATCCCAAGCA TAGTCCCTAGTCTCTTTATTCAAGCTTTGAAAAACTCTGGACTCAAACAA ACCCAGATTTCGAAAATAATCCCAAGTTTAGTCTCTAAATGTTCTGTGTT TTTCATCTTAGAGCTTTTGTAACACCCCGTATTAGCCCCCCTCCCGTATA TACAGACCTAGTATAGTTATATTTCAGTTATATAAGCCATTCAAACAAGT GGATCCTATTTACCTCCTTCATTGTATACCTACTGGATAAAGAGTTCTCA CAGAGTCATTGAAACAGGGGCGTTGTCTGTTGAGAATAATAACCATCGAG AACTCACTGATCTAAACGTTTGTCAAgagggccattccattttatatcca tataGGGGGTGGCAGGGGGTAACTCGTGCAGAATTTCCATGGGgtctaaa aaagattttaagagattttttttttcattttccagggaTAATAATATTAA AATTTCAGGGGGTAAAGGGTAAAAggctgattttagttcgtccaccatca ctttaaagatatgaaaataaattttccatgggttttcttttttaaatctt gccATTTTTCCAGAGGGTAGccacacatttccaagaaacattttatggct taaaaaggttcgtccacctcCCTGTATagaaatttaatggaatggcCTAA TTCCTTCGAAATTTCAGAGGGGATATAAGTATAACTAGGTTGTCAGAATT ACAAGAGAGTAGATTCTCAAACAAGGCTTGTATTTTACCTAGTCCATAAG AAAATAGGGATGAAATATGAAATCTGTcaatagactttttcataaattac gtcacgagcaacgtGTAAGATGTTTACTCACTTGTAAAGATAACACTTGA AGACTCGTGGGATTCAATCACCTTGATAGTTTCCAAACGAGGCAGACGTT GcgctcattgagtttaaagtccgaagggctagagcaGAATCTCTAACcat tcccaggcaagaaaaagtgctTATTTCTCATCCAAAATCCCTCAAACGCG TCATAATCACCGCCACACGAGGACGTTCTGGATGGGatataagtggcttc atttccagGAGTCTCCAGTCTGGTCCTTCAAGCTTGGAGGTCAATGGTTG CGCTCagaataatttatgaaaatgtctatATGGAAATACTAAGAGAATTC TTCATTCTATTTACAGTTTACATTTATCAAATGGAAATCAGTGACATTCT CCAGATATGGTTATGTTCATTATGCTGAATTAGAATCTGCTGAGAACTGC ATCAAACATTATCATACAAACCAGTTAAATTGTTCAAGATTATATTGTTG TTCCTTACCTATATGCATCACGTCACTTGAAGTGCTCAAAAAGTGCACAC GCTTCGTACAGGTGGATGATATCTCTCGGATaacgaaaaagaaaacgaag aatATTTTGAAGAATGCGTGCCCACATATTGATGAAGAAATTGAACGATA TATAGTAAGTCTTCCTTagcttgaaaactaaaaaaacaccTCATGATAAA TTTCAGCAGTGCCGAAGGAAgcatttttttttgggggggggctcGAGTGA GTTACAGTACGTCCAATTTTGTGTTGGAATCATTGGGTGTATGAATGAGT ACCCCAATATGAGCACTATTGGGTTGCATTGAAGCTGGACACGCCAATTC GCCCGAGAGGCTTCTGCATTGCTTGAAAATACACCAAAATCAATGAATTT AAGCAAActtaactttaattttttgaatgGTCGTCTTTAACAAgccatct ttgaaaaaattatttgtggGAGGGCACCATTGTCCCACCCCGGTCGCTAC GTCACTGTTTAAAAAGGAGGAACATAGCATAAGTAAATTGCGACTGTATT TATTTGCACTAGTTAAGCAAACATTCATATGAATATAATGCGAATTGGat tattatttcatttttcaatagaGTAAACGTTGGGAGATAACTGAAGACCA AAAATCTTGTTCTCTGATGATTCAATGGCCAACTAGTGCTCATGCTCTTA CTTGTTTCAACCAAttcgaaaattacaaaaacaacCATAAAGATATATCA TTGACAGTACCTCAGGATGTGGATCTACAAGAAGACTTTGATTTCTGTCT TGCATTACCGCAACCGAAAATTATCCAATACTTTGTGAAGGAATTAGAAC ACAGGATGATCAACATTGACGAAGAAAAGACTCATTGCAATATTATATTA CCAATGGCATCAAACAACTCTAGGTAAATCACATTAATGTCAAACATGGA CCCAGTCTCCtagttcacttttttacaactcgggtacactgacctttata tatccctggaccaagctatatccgccatctttgatcgaagtcttttgaaa gttggtactcgcaaagaagctattgtagtgTTTAAAACTTTGTctaacga caaacggcgctacattaTTAGGGTACAAGTAAAGCAAGATCTAACGCTCT CTCCGCGGATACCAATTTCAAagaaactccgatcaaagattttgcttggc cggcattgagaaaattggtccagggatatataaaggtcagtgtccAGGTA GTGCTTTTGAAAGAGTTGCATTATATCCATGGGTGAAATCAAAAAGTTAT GCAAGTAGGTACGAGATTATTATATAGTTGGCCCACTTGGCAATTTGGCA TTGCTTCAATGATAGACACAATTATTGTTGATAGAGATTGAAAACTTATA AGATAGATTTTATGTTCTTTCAACATTTAAGACCACGCGCATTAACTAAC AGAATGGTTCATTTCGTtttggagcgaaacggaaccgtagcgtAAGAACG TGGCCTTGTAGAGCCATAGAGAATtagcaaatagagcaggattacTGATT AAtcgaaataatttatttttcagacagCCATATCCCCAACAAATACCGCA AATTTCTCCAATCTATACCCTACCTTCAAACCATGGCATTATTCGTCCAC AGCCAGCATCCAGACCTCTCCTTCGAGGTCCTTTCTATTGCACGGTTAAC CCTGCACAGGAGCCAACACCCATCTATGTCCAGCATCCAGAACCAGCAAT CACCCAAACAATGATGATGGCTAGACAACAACATCTTCAGCATCTCCATC AACAGCAACAAGCTCAAAAAATGTCTCAAGGTTTATTGGGTTCTCCTTTA ACCAGACATGCATTTCCTGGTCAACCGCAGTTTAGACAGCTTCCTCCTGG TCTTGTGCACCATAGACCTCCAGTTTCTGGTCAAGCGCTACCAAGACAGC AATCACCAGGACAAACCCGGCCAAAACCTCCACTTCTTGGATCAAATCAT ATACCAGTCACTGGCCAAATGCATCCGAATCATTTCAACTTGGTTAGATT ATCAAACTTCCAGCAACAAGGTCATCCTGGTCCAATCAACCAACCATTAG CTGGTCAAAGACCCCCAAATTCCGGTCAAGCTGGACCTATCCCACATCAG CACCACGTCAGTGCTAAATTTTGGACACACAATAACCACCAACACGGGCC AAACAACCACCAACCGACTCAAGCCCAAAGCCCTACCTCCCCTATCCGGC AATTGGTTCGCCAACATCATCAGCAAGCAAATGCAGCTACCAAAGCCTCT CCTGAAAAGTCTTTACCTCCAAGGTCACAACTTATTGATGATGAATCTCC GGTATCTCCTAATCGACCAATCGATAATATGATTAGCAAAATGTATCAGA ATGCAAATGCAATAATGACAGGTACACCGCCAGATGTCCAATCGACGGCT TCAGATGGCTGGGGTAGCGGTAAATCAAGTAAACGTTACAGCGTTATGAA GAAATCTGCAACGAAAGCGACGATGAATCTCAAAATAGATAGTGCAGATG GCAAAGAACCATTAGAAATTCCTCAATACAAGCTGGCAACCAATGGGTTA CGGCAATCTGGATCTCCGAATATCTCTCAGGAAGACAACAAATGTCCTCC TAAGAGATTACAAGATGAACGATCGAATCCATCTCAAAATATGAGGGTAA AAACAAATCAGCAATTTGTAAATATTTATCCTGGACACTCTAGAAGATTG CCAACACAAGGAAAACATCAAACAGAAGGGATTCTCCCTTCGCCAAAATC GCAACTACCTCAGCAAGGTATAAAACAATCTTCCGAAGCGAAtcataacg ttatatggacgttcgGTCAACAACAATATGATAAACCTTTGTTTCAATAT TGTCCTGTACCAAAGATGAGGTCCTTGGACCAGCAAATGGAGCCTGAAAG GGACGAGGAAGGGAGCCGTTTCCTTACGCACATTATGACGGAACATAGAA GAGTTGAGAAAGAAAAGATCGATTGTGGTGGAGTTGATTCTGACGAAAAA CAAGACCAGACGGGTCAGCAAATTAAGGAAGAAAGGAATAATTCTGAAAA AAGACAAATTGTCTCGTCAGAAACGCCGTTCAAATGGTCAAACGCGACAA AACAGATGTTTGGCcggttgttttgatttgtttgacTTTAAAAAGTTGTA TACAGTGCGAGTTTTGTCTAGCAGCGGGAATATTTGTTTTTGAAGGATTT GATTTTCATTACTAGTTTAATGGTTGGGAGTTTTGTCTAGTAGTGGTAAT GTGTTTTTGAATATATGTTTAGTTCCATTTTTTTGTCCAGCATCTAGCAC TTGAGGAGTTTTGTCTGGCATTGTTCCAAAGTGTTTTTAATAATTCTTCT TAGCCCTTGCATGTTTAGGTGCTGGTTTGCTTGAGTGAGTAACTTGcgct aatttttttaaatctgttgTTTAAATTGTAATGGTTGTATTTTGTGTTAC GAATTTTAGTTACATAATGTTGATTAATTGTGTGATACATTTTATTATAT CAGGTATTGGgcctttcaagaaaaaaaaatgaatatgggggtggaggatt taacttttttttggatatttacccccggacatagTGAATCATGACCCCCG GACAACAGATCTTACCCCCCGGAAAAGCATCAATTGACCCAAtcgacatt caaaattacccctaaacagagcaaatttgccccaaaaacaaagcaaactt TGCAGATTTTTAACTACCctcggacaaaatatccaatatatcctccaccc ccacatacaaaaattttctggaagagcccattcaaACACTTAGGTGAAGT TTGCTATTTAGTTTATTTGTACTTAGGACTCATACTATACGTAATATACG GATACATGGTAACTATTCCACTTACATCCACACTAACCTGGTACTCTGTC ACTGTATGGAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00071147TCONS_00071147Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00071147-proteinTCONS_00071147-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:185222..193183 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.07 0.04 0.03 0 0.07 0.05 0.09 0.12 0.04 0.12 0.08 0.05 0.02 0 0.03 0.03 0 0.02 0.01 0.02 0.02 0.11 0.01 0.03 83.69 28.28 0.03 0.03 0.11 0.04