XLOC_044065 (gene) - C. hemisphaerica

Overview
NameXLOC_044065
Unique NameXLOC_044065
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_58:827295..836751+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044065 ID=XLOC_044065|Name=XLOC_044065|organism=Clytia hemisphaerica|type=gene|length=9457bp|location=Sequence derived from alignment at scaffold_58:827295..836751+ (Clytia hemisphaerica)
aaaagatttcaaggCAGCACTGATTACACACAATTAAAAAGATAGGCAaa gtatttttacaaaattatcTCTAACTCAATCTGTCAAAGTGCTTTACAGT ATTATACATTACATTGAATGGTAAAACGATTAGAATTTCATAATTCTCTG GTGAAAGTTCATTTGTTGCATGGGATGAGGTGGGACGATATCTGGGAAAG TAGCTAGTGACCACTGGCCTGTAGATTCATTTTAGACtatgtattgattt gattccaGGCATCATTCACTGAGGAAATGGAGTCACTTTAGCTTCTTTTC TATCAGTTCTTTTCTCTTGTTAGAGCTACATCTGGTTtggaatatttgaa aattattgaaattcaaatttttgcttaaaacaaaaaagaaaatagacaTT ATGGTCTGAAGGTGATATTATAGATacttttttgatactttttaaagGCT TCTTTGTTCATCTcaacaatcatccaatttgagaAATCCGATGATGGACC ATGACTTTGATGCTATTTGAAAGAGCTCTCATAAGAGGAAGGTAATTTGG CAGCAGTGGCTCGTCCGGTagtgaattgagaaaatggtccaattgatgtt taaaattacTTTTGGAGCAGTTTTTGAGGTTACAGATGGATTGTGGGAGG GCATTAAATAATCTGGGACCTTCTTCTGACAGGCAACAGGGAGTCTCCCC ATATGTTTTTTTTCCTTATGTTCaccttttttagattttctacCCAGTCC CTGGTTGTCGTCCTGCTTTCTTCCAAGAGATTTCCCAGCACCTCACAAAT AAGGAACCCTGGTTTGTGTCACGTATTTGATTTCTTGGATCTATGGCTAC TAAACCAACGGATGAAATTGAACCAGAAGGGGAACCAAATGAAGACGTAC AGATTTGGAAACAAATAGTAACAGAGCTATCACTTCAAGCACCGGATCCT CAGATCAAATCTTGTCTTCAATTGTACAATCCAGAGAAACCTACAAAATC TATTATCGCTAAACTgaccaaaagtttcaaaaaagacaCAATCAACAATT CACGACACACTTAACTTCCTGTCAAAACAGGAAGTTGAATCTGCTAACAA GAATGAACTTGTCCAAAAGCTTTGCCTCAaagtcaaaagcttttttccAG ATGTATGCCAGATCTGCAACATGTCCTATGTTATCAAACTCAATGATGAA CCCTCTCTCCAGTGTACGTGCACCATGTGGTCAAGAAGTACACCGAGAGT GCTACctgaatattttgaaagataTGAACCTAGTTGATCATAATGAGGCA ATACGTGAtagacttttcaaaattcaatgtcaATCCTGCCAAGAAAACAC TGTGTCTTTCACCCATGATAGTAACACACCAAATCCACCAAGATCAACTG AATCCCAGGAAAAATCTACTTGGAGTGTAGTAGATGAGGATTATGAGATC AATGCACCAATGACAGAAGACGATACTTCCAACACATTAAACCAAACAGC TCGCGGACCACCAAATGAAATCAACTTGAACAACAGCAACCAAGAGCAAC AACAATCACGCCCAATATCCTGGATCAAGATCTCAGACCAAATCAAAGAC AAATGATCAAATATGTCACataaaagaaaaatgtaaatatgAACTGAAAG GCCGAGACTGTCAATTTATCCATCCTAAAGCCTgaacaaaattgctcaaa tatgGCAACAAACAACCAAGAGGCTGCAACCTAGGTACCAAGTGCCAAAG CTTCCACCTGAGGATGTGCTCATCATCTATTACAAGAGGGGAATGCTTTA ATCTTGACTGCAAACTCACGCATGTTTTAAAGGGAACCAAACGACAtcag aaaaagcaaaacaatcgtAATGATGAACCTCAAGATTTTCTCACAATCCT GGACAACTTTCGCACAGGAATAATCTCTCTTGTGAACAATTGTTTCAGCA ACCAAAACCAACAAATACAATTCAGGAACCACAATTTGTCACATCAACCT CAACAAACATTCAATCATCAGCATCCCCTACATCATCTACCACCCAAGCA CCCAACAATGGAACCAACATTTCCAAGAAATCTACTGGGACAGTGACTGC CCTTACTGATGCTGACCCGACTACCAAAACTACTTCTAAACCTACACTGA ATATGTTTTCATTTGTCAATATACAAGGACCTTGCCCACAAACAAAACCT TCATCTGTACCCTACCTCAAAGATCTTACAAACAGCTCAAACCAactgtt tttaggcttttaacCGAAACCTGGTTAACGGACAATCTCAAAAAAGGAGA ACTTGAGAttgaaaattacaattttttaaagaaaaacagagACAGAGTAA AATCGAAATATGGCAGAGCAAGCAGAGGCGTTGCATTTTATGTGCATAAT GACATTGCACTATTCTTCGAGCCCATTTTGGAATTCTCGAACGGAGTAAA TGAAGCATtgatgcttttatcaaaaaaatttaatattcttCTGTGTTATC TACAGACAACCCCACAATCCACAAACCTGAAGCACCTGAATTACAAGAAC TCCTTTCTGCAATGATAGCAAAAATTGATAGTAttaccatgaaggtaata aagatacagatggagagaaaacgtctcggtaatgacctaaatggtcgttg aaatcttttataaatctattcaaagcggcctttctttgatgtaccatcat tggaagcaaaaaacatcaatttataactttaaaaGAACAGAAATAGGCCG GTacaatgattttgaaaaatttaattttgcgagaaatcttagttaaaatg cgattcgaaatagtttcaactgatttaaggataaaagaatatattaattt tataaggatatatttttgggctggcattttgtgaacattgagagtcgcat cacattatcattgaaagtttcttatcttgaaatcttcacgtctaagtgga cagcggttttcatactctgacaaaatgatcgatacaaggttcttaattgt aacacgtaattctttttcaaatctatcaatggctttatgggcagcttccc ctagaagtttagagtattgtgcttattatgtgaagtttttttcaattttt catgacaaggctattatatTTCAATATACTTGTTAAAAATGTAATGTCTT TTCATTCATCTTTAATATTCTCACGAGTATACcgaaaattaatcatctta ttcccaaagcaaccaaacagctgtttgcttccgatgataaatcagaatag aaaaaaggcattgactctccatctatctttattaccttcatggtatTACT GATTGTACACCTGACATATACATCCTTGGGGATTTTAACATACCACACGC GCCTCTTAATGACGAGACTTCAACCCCAACACGAAATTGCAATAAACAGC TTCTGGACGtttttttgtgatgacgtcattattttcatatataatttaag tgtcactttgtcaatatttggAGTCGATGATTTGTCcttgaaattttcta aatagcatgttttgtATACAACATTTCCTTATTGCaaataatattttatt aaaCGTTTTTATAAATTGCATGTAACAGTTACAGTTACAGTACAGTTTTG ACCTGTGTCAATAGCCTGTGACCTGTCGACTCGAATTAGCCGACTTTTTT TGCAGAGGTAAATGTCTTTTCAAATTCTTGAAAGGGTCAAATGCTtagaa aaattcttgaaatactttaggtgtacaaactttcgcaatCAGAAACTTTT GCTAggttcaaaaatatttactttcatgaatttgaggaaaaaatattttt cgcaagCACAAACTTTTTcgaatcgttggataaaaatgagaaattttcaa caaaattgttCCTTGAATccgataaaaaattttctttgagttTGAAAAGG TGTTGAATACTAAGTTTATCCAATTCAAGAAGTATGTTTGTCCCTCTGTC TAAGGCGGTTTGTGCGcaaatcttttttattatatattgatttgcaaaag tttatgttctcaataaagatttttttgtcaaatttgcaAAAAGTAAGTGT TGTAAATTTCGCATTTTTTGTATTGCAAAGTGCAAATTTGCACGCCTACA GTCTAATATTtacatattttcttttctttgtgcTACTGATGTCAGGCCAG TTCTCATCTCTCTGTGCATATTCATTTATCAGCCATTCTACCTTAAAATT TATCTGTAGatatttttgcaatattttcaaaaaatgattcaatttttgcA GGACTTATTTTTGCAGGCACAGGAACTTGTAAGTTTCCCAGGGGTAAAAT TTAAGGAATCAGCCGCTTTTATTGGCCATTCTATTATAGAATTTACGAGG CAGACATCAAAGTTTCTAGTGTCTGGAAAATATATCTAGCATAACAGTGT GGGgttacatttttattaaggtGTCCAAGAATGCTTTAACTTTATATTTC CTAAAtcttattattttcaatttcttctaaAAATTTGTGTCTTTGTGTCT TATCTTTagataaataaatcaaaacagaaTGGCTTTAGAAATCAAGAAAG TTTTAATCAGTGATAAAGTGGATTCTAGTTGTCAAACAGTGCTTGAAGAA AACAGCATTGAAGTGGATTACAAACCTGGCCTGTCAAAAGATGAACTCAA AGCTATCATCAAGGTGCCACATTCATTTCCTGGACAATCCAATGATTGAT GAAAATCTTTATGATGGCCTTCTTGAATACCAATACTTGGATTTCTGCAA CTATCCACAAAAAGATAGATGATAGATAAAGATGTgagatttttctaatt ttggaaAACAATTCAGAGGATAATATTAtggttttaatattttattttta ggattACGACGGTCTTATAGTCAGATCAGCCACCAAAGTGACGCAAGATG TTTATGATTGTGCTGAAAGGTTGAAGATTATTGGCAGAGCTGGTACTGGT GTGGATAATATTGACCAAATTTCTGCGTCAGCAAAAGGAGTTCTTGTCAT GAAGTAAGAAGCTGTAAAGATTTCTTAATCAATTACTTGCATGGTCTTTT AGAAAAGggattttatttaaattttagatttattagtttggagtgaagaa aaaaagcaaaattgattttaaataaCAAACGGTTTTCTTTTTTCAGCACA CCGGGTGGAAATACACTGAGTGCAGCAGAACACACCTGCGCCATGATCTC TGCTCTTGCAAGGTATACCTTATTTGTCAAATATTTTAGCTCATTTTGTT TAACTgaccaaaaaacgaaaaaaacgaAAGCAGCATGGAGCACAGAGAAA GTCTAAGTCTGATCCATACATACCATACCTACCTGCCTACACATTACGAA GTTGACTGACCAGGTATGAACGATAGAAAAATAAGATCATTTCCTTTTTA CATTATCTTTTTTACATTAATTACCTTGAGTTTAAATCATTGAGAGGGAT TAACTAAAGTCTTTACATCTGTTGAGAAGGCTgtttttcgaattcaaatc ctACTGAGAAAGTCACGACCTGATCGCAACACTGTTCTAGAGAGAAACTC AATAATCGTGCTTATCGCTATCTCTTATCTTCTTTCAGACACATTGGTCA AGGTTATGCTTCAATGTTGGAAGGAAAATGGGAGAGATCTAAGGTAATCT ATACAGAAGCGTGAAAATTAGTATATGTTATCACATGATAATGAGTGAAA TTCGGGAATAATTGTACGAGTGATTGCACGagggatttttttgtttttaa ttttctgagtccttttcttatattgttgttcatagtttttctttctcaca aaaaaaACGTTCGCGGcatcgaagagtgtgattaacggttaattgctctc tttgaaggcacgccaaatgagaaaaaatacaGTCGGTAGTCCATCGTGCG ATTATACATGATAAACATCGACAACGACACTTTAGGATTTACGCTCGCGT TTACTTTGGCTGAATGACGTCAAATTTCGCGAAGGTAACCCGGAACCCCT TTCAAGGAGCTTTAAGGACAAGGGCTTTATTGTACACCATCCTATTTTTG TAGAATTCATATACCAGCTCTTTTAATCGTTATTTTGATAGTTTATGGGA TGTGAACTCGGTGGAAAAACACTGGCTATTATCGGGCTTGGTCGGATCGG ACGTGAAGTGGCTTCAAGAATGCAATCTTACGGAATGAAGGTCAAAATTA TGAATTAAACTCTCGCTAATTCCAACTCGAACAGgattataaagtttttt actGGCTTTTCCCCATGACAGAAGTtgagaatgatagaatgatttgaata aaagaagttcgaattagcgagggTCAACTGTATCGTGCATTCTGTATCAA ATTTCCCATAATGCTTAACCTTAATAATGTTTTAGTGAAATAGTTACCTT TTTAACTAAATGAACTGTCCCTTTCCTGTCCTTTGAACGGACATTCTTTT TCTTACAAATCTAAAGCAGCATCTCTTATCTTTTCTCCAAACCTAAAACC ATCGAATTTATTTCAACCTTTCTCGATTTGGTCGTTCACAGACGGTGGGT TACGATCCTTTGGTTTCACCAGAAGAAGCTGCTACATTTGGTGTGGAGta tttacaattaaaaaatatttggcCCATCGCTGACTTTGTCACAGTTCATG TACCTCTCATCAAGCCAACACGTGGTATGTTCAACTTCCTTCCAATGAAA GGTTTCCTTCTTGTTGCCTGCATCTGTGTGAGTGATATCGTtggagattt tcaaaaaatctgaatttttagATCTTGCTTTTAGTTAAACAAAATGCTAG GGGACTACAAAATGGTAGTGACGTTTATCTCTGAATGTACAGTTGATTct caataactcgaacctcttaatctcgaatgtctccttaactcgaacaagtt ttatagtcccttcagttaacaatgtcaTTTAAACTTTATTCGAAAAGATT TGCGTTCCCTGTTTGTGTTTCAGCTATGGAGACtccaatttcaatttcat ctttttctttCCATTTGAAGGGATGATCAACGCATCGGTGTTCGAAGTTT GCAAACCCTCCATGAAAGTGATCAATGTTGCACGTGGTGGAATCATTGAT GAAAAGGATCTCCTCAACGCATTGAATGCTGGGAAATGTGGGGGAGCAGC ACTTGATGTCTTCGAAACNTCAACGCATTGAATGCTGGCAAATGTGGGGG AGCAGCACTTGATGTCTTCGAAACTGAACCACCTAAAGGTTGATTTAAAT TCCTGATCATTGTTATGTGCGGTGAAGATCTTCTACAAAGAAATCTACAC AATTTAGAAAGTGCTCATTTAAGTCACTCCTCAAATTCGGCTATATATCA ATAGAGTttcaatatgaaattttttacCATCTTGTTTTCCATTTGGAAGA TTAACCTAGGATCAAAGAAGGAATCTTCTGGCtgagtttcatttttcatt tgtttgtcCCCTAATGACATTCGtcgaaatttagtttttttaactttttc tcttCGCAGAGGGCAGTGTCAGCATGGAGTTAGTGAAACATCCTAAGACC CTATGCACACCACATTTGGGAGCGAGTACGACAGAAGCACAGTTGCGCGT TGCTAAGGAGATTGCAGAACAATTTGTGGATGCGGTCAATGGGAAACCCA TGGTCGGCTTGGTGAGTGCTTCTTACTCGACTCTTTTCAGGAACGATTTC TTTGGTAGGTCCCGAGTAATCTAGGACTTGTTTTAATGGGCTCCGCGTCC TACTCGGCCATATAAAAGTGAAGATggttagtctgaatcgcagacctcta tagatatacttcctataagaaacttttatcgctagaggatgagcagaagc ttAGAAGATGGTCATCCCTAGTACTATAGCCTATATAGAAGACTGCTTCT GAAGGCCTTAgaatattgattgatttaaaGAACGagcatttgtttcattt gaacCTCGTTGACTTTATTGCCATCATGATTCCCACGAATACTGTTCATT TTAATCGAATAGCAAAGAACCAATGACATCGATCTCTCGAAAGAATTTGA AACTCGCGTTTCTACAGGTTTAACCCCCTTGTTTATCATTGACAAAAACC GCAATTCTACAATTTCAAAATACCCATTACACCAATCCGTTTATTTCAAG GTCAACGCACCAGCTTTATCGCAATTGGCCAACCCTTTGTACGCACCTTG GGTGGAACTAGCTCAGAAACTCGGCTCCCTAGCCTCCAATCTCAGTGATT CAGCAAATTTGACTTTGCATTTGGATGGTGATGAATTGAAACCAGCCACC AGGCTATTGAACACTGCGCTTTGTTTTGGACTTGCTAAAGCTAAAGGATT GGACTGCAATATGATCAGTGCTGTCAGTCTTCTCAAAGAGAAAAACATAG TGGTAAGTCTATACTACATTCACTATGTCTGCGATTTGTCACTTGACAAG AATTATCTACCGCGgtacggcaaaaaaaaaacgtcACCAATTTTAATTGT AGCGCTGCCAGATTATCGAAATGACCGGGAAAAACTATTAAAGCATATTC AAAAGTTTCCTGGAAGTTTTGACTTAAAAGAGCTATTTTTCTAAAAGATA TGcctttatatatattttaggAATCGAGTACGGAATGTTTTATCTCAGAC AAAATTATGCCAAAATATCCCTCGTAGAATGTCTAAATAATACCCGATTA CTAAAAGATTTTAGACAACACTACGATAAAGTTTGTCAATAAAAATCTAG CTTTTGCTTTATTGATcaatgtaaaatttgaaaatgctcTTGGCCTGAAC CATAAAGCTCACCTCAAAAACAGGGGTCGTGATCATACCCTTCGTAAATG TGACCTTGATGATCATTTCAACATCTTCTTCACTTTAGGTTGTCAACTCA CCAACACCCAAAGATCTCGCTTACTCTGCTCTCTCTGTTTCAACAAGCGA AAACTCATGGCTCGTCACCGGCTTTCTGAGCAGAGGAAGACCCTGCATTG GAACTCTCCAAAATACTGAGCTCGCTAACCCAGTCGTTTTAGAGAGCGGT TTGGTCTATGCAGTTTCCGACTCATCAGAGAAAGAACTTCTGCTGACTTC AGCAGAAATGGGCGTTTCTTCAGTGAGTCTATCACGGAATGGAAACCGGG TGGTTTTTGTCGCAAGTGTCGCAGAGAAACCGGCCAACGAACTATTCAAA TTCATACAATTCTAGggagtatttttgaaattttaggttagataggaaat atttttcaaaagatatggCGCATATGTCTGAAGTATAGGGAGCTTCTTcg tcatttcaaatttttgtggtttgtaaattttctttacatatttgaatttt tttattttattctgtcAACTAGGATTTTTCCCGATATTTATAAAACTGTA GCTCATAACCGAATCAAAAATTACGATATTAATATTCAAGTATTCCTTTG TTCCTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070842TCONS_00070842Clytia hemisphaericatranscript
TCONS_00070843TCONS_00070843Clytia hemisphaericatranscript
TCONS_00070844TCONS_00070844Clytia hemisphaericatranscript
TCONS_00070845TCONS_00070845Clytia hemisphaericatranscript
TCONS_00070846TCONS_00070846Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070842-proteinTCONS_00070842-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:827295..836751 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PHGDHPREDICTED: D-3-phosphoglycerate dehydrogenase isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
61.3 63.44 70.88 67.91 209.22 163.68 165.1 203.03 50.73 138.06 26.44 13.55 5.18 2.78 6.05 8.46 16.11 12.58 0.78 1.39 10.11 13.58 13.25 13.76 9.75 10.39 124.5 68.12 30.12 13.41