XLOC_044063 (gene) - C. hemisphaerica

Overview
NameXLOC_044063
Unique NameXLOC_044063
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_58:798927..809622+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_044063 ID=XLOC_044063|Name=XLOC_044063|organism=Clytia hemisphaerica|type=gene|length=10696bp|location=Sequence derived from alignment at scaffold_58:798927..809622+ (Clytia hemisphaerica)
ctgaaTTTGCTTCAACTTTTTTCTCTCTAGGAAAGTAACatgagaaatga aaataaagaagctGATGATGGAAGAGAATTTGTGAGATTTGTGGAGGAAA GTTGAAAGGGTCGTAAGAGATGGAATTACTACTTTCGTTTTTCATCTATT ACAGTGTTTGTGATTTGGGTAAGAGACTTTAACCCAACTGTTCTTCCTTA ACATTTTCCTATACAATGTAATCCTGGCTTTTCCATAATGGGTGAACAGT GGGTTTCTTAAATATTAATTTCACGTGACTTAGTTAGCTAGTTTAACATA CTCTCATCTACACTGATGCTGCAAAAAAGATTGGATTTGAAACGTCAATT GGCAGGCGTACTATTTCAGTCTGTAAATGAATCTCTCTTTCTCTCACTAG TGTCCACCACAAGCAGTAAATGCTTCAACAAGACGGGCCAATGCGATCAG ATCACGGTGCGCTGGCTCAACAAACCGCCTTACATCTACACAGATAACGA AGGAGAGATGGTGGGTATTTTGCCGAACATTTTGGAAGAACTGATTACGT CATGTTGTGGGGAATGTCAAGAGTGGAATTATTTGCAGGCACCTGTCAGG GATGAAACTGTCCTGCTTTCTGACAAAAGTAAGTGCTTACATTCCAATCA CTAAAGTTGTTGGCTTACCTTCAGATTAGAAGATGATTCTGTTTTCATTT GACGTTGAAAACGCAATATGATGAACTAACATTGGTATGACTTAACTGAA AACGAAATTACAGAAGTGAGAACGGCGGAGTCTCTTTATCTCGAATGTTT TCCTTGCTCGAAAATGTTTTATGGTCAAAACTttacttcataactcgaac aaatttgtgttccacgtgcgtgttcgagttatggagactccattgtGGTA CCCTCTACGCTACAATGTAACCGTTCATTTCATTGGTATGAATCTCTCTC GCTTTCAGTGAAAAGGGGATCTAATTTTTACAGtaagatttcaaataaaa tgacCCCTGCTAACTTATAACTACTAAAAAGtttctattttctatctctt tcAGTGAACGGATCGGTGTTCAATGTACCTGTGGTCAAAAGCATGGAAAC GAAAGAGATTGGTCGCTTCCCTTACTTCCCATTGGTGGAATCACCAGGCC TTCTCTACATcatccaatcaaagaaagaCCTCGATGTCACCGTCTCCAAC GCCATTCTAGAAGCTGTCAAAGAATCTTGGCCTGTCATGATTTTCGCTTA CTTGGCTGCTGCTGTGTCAGGCATCATCGTGTGGGCTCTTGTAAGTTTTT GTTGTTCAGCAAACATGCTTTTGTTTGTGAGGTCTGAGGAGAGGGATTGT GTGACGTCATGATCGCGCTTGAGTTTAAGTAATCTGAACATTGGAATTTA AGTTAAACAGGGGTTTTCTAAGCattttagttctttcatttcttaaaacc aaaaaaactttcttgattTCAGTAACAAGGAAAACAATTTTCATGGCTTT TCATGGCTATTGTTCCAAAACTGATTTTGATGTTGTTATTGTAATGGGAT AGTTTAATCTAAGATGTACGATCtaaataatttccaaattttccaaacaa ttttcttaaaatttaacAACATCAAAAGGAAGAACTTGCTTTATTAAGCT TTATTtacttttgaataaattttctacctacaaaatgaaaaaattcttta agtTAATAGAAGTATGTACAAATCTTTTAGCAGGGGttaatcaaaaatca cattGAACACCAAATCTTATGAAAAGATGAAATCACACCATCACAATGca ctttgatttttaaattcCACTGATAGCTCTTAGAGACATAAATGAGGGTC GTTGAGGTCTTTTCGCAACGATCTTAAGAAGCTCTTCAAACATAGCTCTT TAAGTATTGCAttgcactttttttataagaacaaaatatataggAACATA TATAGGCTTCCATGGCCGAAATatttagaacaagttaagaacattttaag gctttacagactctaaaacacccaatttcttaagaaaatggacaaaaaaa ctCAATAAATAACGAAAATAGGAAcgtcttaagaacatttttaggatgaa aactcaaaaagttaagaatatccgaaggcttccaaaattttggatgttct tataaaaaacgtgtactttgtAAGGGGGAAATAAATTTTACTGTTTTACT TTTGCTCTTTGTGTGTGTGTTCTTTCTAAGAAGTTTGTTAATAATGTTGT CATTACCCTCAATGACAAGACAAGAATATtagcatgaaaaaaataaagaa acttactaaaataaaatgaaaactaaaacgtttcaaacaaataaacgatt tataaaaattagtatctttttttttaaattatgtacagaaataaaatttg ttttgaattttagcttTATAGAATAAACTGCAAGCTataaaaaggtaaat aaaattttctttgcctaaaaatatatttatacagaaataaactaaaatgc taattttaaatttcatgaaaaatctgATTTGTACATTAATTTTTAGCTAC AATAACGCTTGCCACCTAAAATAATGCCTCGCTTTGTCCAGCATACTTCC AAGATGATATGTTAAAGATTATTTACTATAGAAATACTTAGTTTCAGAAA CGctaacaaaaagaaaatatctacAATCATCGACAAAATGtctgtagact tttcaaaaattcctcaATAGTGCCAAAAAAAACCACAAGTGGTTTTACAT TTGACTGAAGACACCTACATGCTTGCTAGCAGTCCTTGTGGCTTTAGTCC TTCAgatttttggacttccaaagtcttcaaatgactgaaaatgggtGATA AAACTTCAGCCACACAGGTGGTGGGTGCACCAGAGAGCTCTGaaaagttg tttattttttattaaatcaTCTTAAATATGGTCTAATTATATGTCTTCTC GAAAAAGCAAAACTCATTGAACCTTCAATCTTCAATCTCAGGCAAAAAAA GACCTGAAGACGCCTGAAGACTTTGCAAAAATTCATTTCCTCAATGTTGA GTGGATTTGGGTTCTGGAATTGTCAACCAAACTCTCtaaatccaataaaa acaacattggtcctggtaaaaatgggttttcagagcttattttgaaattt ttcatgcatttttgaaaagtttgcaACCTTTTAACCTTAATTGTAAACTT CAAACAAACTTCTCTGTGTTTGCTTCTTAAAAAGAGTGTAACGTCAAAAA TCCTTCATCTATCATCGCACCAGTAATTTTAGCAGTTTTTTTAGACTCAA TTTCTCCTTTTCCTATACATCCTCAACCATGCTTGTTTATGATAAAGTAC AAATTTAGAGTTCCATTCTGTAAAACGTTTCTTATCAACTGTTGGTTGTT TCAATAAAGTTTTACTGGAAGAGGGTCCGTCAACAACTTCCTGACCCACA TCCATTACAGGTTGGTCACGTGACATACCAAGCCAACGACAACAATATAA CAAAGCACCAAACAATACCATCATGGTAATAAAAATAACCAGCACAAGTG GGATGCTCACGTACTGTGGCAAATCCATTCTTCCttcataaaaagctttt caatttttattgtaGCATCTTTTGCTGATTTTGACGTtcattcatgtttt tatttctgtaaaaataaattacaattttacaattaaTACCTCACCCTTTT GGGACCTGGATAAAAAAAGCGTTATTTTATCCAGGGATGTAGAGTGATAT TTTCATGAAAGGACATTTTGAAATAGCTGAAAAAAAACATGACAACGGAC TGATCTATTTTCAATGTATAATTAATTTACTACATCCAACTTTCGTTATT AAAGATTCTGTACAAAGTCTCTACACTAAAATTGAAATAAGAAACACAGA ActtctttcaaaacaaatatgaaaataaaaacgaaagcaAACTCTCACTC ATAACAGAAAATCTACTTTAATaaaaaaccataaaaattttcaacaacaa caaaaacatctATTAATAAGAGCAATCATAAGCATATTAAGAGTATGAGG TCATATTGAATTTCCCTCAcaatatatcaaaataaaaagacaaaagtgaA GTGAAATCACTGGCCAACTTGTCGAGTCAAGCTTGATCTAAAATATCTTT ACGGACCTCACGTAcacatttcaaaacatttcctataatattcttgatat tcatgacgtaatgttttctacggaaatagaCCCGGTATtcgccagtagtg gcaaatgtTATACAACCATtattgtctagtttaaatttaccactactggc taaaaccggggtatttccgtagaaaaaattatgtcatgaatatcatgaat tgaagcTCCCTTCGAAAGCTAGGTTGCACCGCTTGTATTTTCTAGCTACC ACGCGCGCGTGGGCACACGGAACTCCTTTTTCGATcccttgcttgttttt attttctcccTTTGCGCCTCTCGAGTTTcgcttttcaacattttcacttt tcaacattttcactTTCTGTATTTTGACATCCTCTCTTTCTGTAACTTCA CAGGATTCGTACTGGAATCCTCATCAATTTCCCAGCAATTTCTTCAAAGG ATCATGGGATGGATTTTGGTGGGCTTGCGTTTCCATGACAACCGTAGGGT AAGCTTAATCATCACGAAGGACAAGCTAGAGGAACATGGCGGCATTCTCG ATTTTGAATTAAGTTAATTAGTGCCAAAGCACGTTTGACATGATAACAGA GAAACCATGATTACAGCTGATCTATAACTATATAATAGCTGATCGTTAGA AAATTATCTCTCCTTTGTTTTTCCTTCTTCAGTTATGGAGATCGAACACC GAAATCCTTTTCTGCCCGTTTATTCACGTTTGTTTGGGTTCTGGTCGGTT TGGTTGTCATAGCAATGTTCAACGCCAACATGACTACCACCCTCACTTCC ATTGTCATGACCGCCAACGCCCGGTTCTCCGGAGAGGAGGTTTGTATTCT TCTCATGGCAATTACTTGCTTGTCATATGTTCACCAGtgattttacaatt ttaaacAAACCTTATTGGATTTTATCCATTGCTAAAGGATTTGAAATAAC ATGGCTTATttcaaattcacttttttagATTGCTGTCACGAAGGAATCTC CAGAAAAGCGATATGCGTTGACCAGGAACGTCCAAATCAAAGGtctttct ttattatttttctttcgtgtaaaattcaattttcggGTTAGGGCTtaggt tgcttagcattcttgctcattttttgaaaaatttgttttgactaACCCGG ATATTTTACCATATTATATCTTATTGATTTAAGGGCCATCGTTTGTCATG ATCAGATTATCTAAAaacttttactttacgagataaTGAAAAAAATCGGC TAATTCGAACCCTTGTGCCTTAGCACCCTGGTTGTTTATAAAGAGAAAAT GTGTGTTTACTACCACCaacatttgatttgatttcagttttcccatgaaa aaaaaatgaactacTATTAGTTACACAGTCTTCTCGAGGTTGGATACGGA ATATACAGAGAGTATGGTATAGTATTGCGAGTCGcaatacggtttttact gacccctgtatatcccgtatcccacctccaGACGACCCGTGCAACGGATT TATCCCGTTGAAGTCCCTTTGCATGTTTTCCAAAAGCACGAAAACTTTCA GAACTCTCCAAGTAGATTCTCACATCAAAGAGCTACAAATTAAATTAAAC TGTGAAAGTGGGATCCGTGAAAGTGACATTTTATAACATCGCTATTAAAA GTCTTGCTGTAAGTATCCATATAAactcaagaaaagtaaaaaatcaaaat aacaaattttctgTTTGTTGACTTTCTCTATCCCGACCATttgattttcg atttcaagtctTTTCAACGAAACATAAAATTCGAATCTTGatcgaaacat tcgaaagcgcattcgtcaatatgcaatgtcttcttttttttctcaatcga acgCGAGGGAGACAGGATACGGTTtatatcccacctccacgtgatgtttt ttgaccaatgaaattgcTAGATAATCTTACTGATGCGGGGTAatattagt tacacggtcttctcgaggtttgtctgtacacaaacccaatatctacggct aatttaaaaattcattgccgtagagggtctgttgtcattgtcttttctgg tttgagatttttcaaaccaaccgctACGATGGAGTGCTGTTGGAGTTNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGGCGATAAGACAAAA TGGCCGTCAGAGTTGTCAGAAAGTATAGAAGTTTgtcgaaaaaaagtgtt ttcataacaaaactgacttctttattttttaacaattgGAATAAAAGATA Gctctaaatgaagacattccattgcaaaataactctttttgcacaaatcg aatgttttttgatTACATTTTGGATCTTTGAGTTCACGAACATGAGAGAG AAGTTGTTTGATTGGaatcttgtttttaaagtggttttaacttcagttct ttgcAAAAGAATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNAAGAATATACTCAGAGTATCTCT GCatgtttttatgttcaaattcagtattactTTTACGGCATTCGATCTAT GTAGAGTGGctatagtttgttttgttggcatcacttttgtaattaaaatg tttgtatttttctttggcGGACTACATGGATAAAATAGGGTAATTGGAAT ataattttctgttagacaattttgaatatgtcttcgttacttttcagctt ttagtttggctcaaaaacattaaaaaagcagccaaaACATGCTTAGAAAG TGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctca tcgcagaggtctccgtacggaaaaacttttatcaaacagacaatgcgcac agagtgaactacgctacgataatcgtgagatacactctggtacagagtat ctcgaggtgggatatgggatatacagggtcagtaaaaaccgtatttgtgg cgaggcttgccgagtcccaatacggtttttactgatccctgtatatcccg tatcccacctcgagacgaccggcaggtacaaaatgcataaaacataatgc atattgcataatgcataatagtattgtgtaatttacagaacgattttata ttctctgaaactctcctttgcagaggcaaaaccgcgaaaacctctttaga agagttccttgtaaacattccaatcagagggatttccccagacataataC TGAATacttacttttcgaatccgagcagatccgaacgaaagagaaaatat tcgaatcataacaacaaaaggttttccgtcagcataaataataagaagat gcaacagattagataaaaaaacaacataaacattcgaatgtaaaaagatt cgaaatctattttctttgatctagcttccggatgaagctctttaatttaa aTTGGCTGGATATCTAAcaaaaaagcattcacatggttaccCATGCTTCG TAAGAGagaaaacccgttgaaatttattagcaattattcgaaaagatctc tgagaaaacccagaaagatcttgctataaaatttacgttttcgagtcaGA AAAGTAacatacggaggagatattttcgtgttttttctacattatactac gttctgtaaaatacaactatgaaaatcaaaatggcgacaagcattttcaN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggatttt cttcatcatccaaaattcaaatttacagctttctaccctttattttctgg tagaaattggtatatttgttttgttgaaagtattatcttttaaattctcc ttattaaaggctctaaaattgacatttttcaaatattatgcattatgcat tatgcaatatgcattatgttttatgcattttggacctgccgtcGAGACGA CCGTGCAACGGATTTATCCCGTTGAAGTCCTTTTGCATGTGttccaaaag cacgaaaaattttcagaactCTCCAAGCAGATACTGTACTTACAATAAAG AGCAAACTGTAAAAGCGGGATATATGAAAGTGACATTTTATAGCATCGCA ATTGAAAGTCTTGCTCAATCCATATCAaccaaagaaaagtaaaaatcaaa ataacttaaaGATTTTCTGCATCCTTTTGACACAAACATTCTCAATCACT GTTTTcctcttattttattttttctgtcttttcaaaacaaaacattcgaa ttttgaccaaaacattcgaaagcgcattcgtcaatatgcaatgtcttctt ttttttctcgatcGAATGCGAGGAAGACAGATACGGTTtatatcccacct ccacgtgatgtctttcgaccaatggaatcgcgagaatcttactgatgcgg gaAAATCTTTCTTACATTCAGCTGTGAAAGACTTTGAGGCGATAACAACA TTACTGAAGAACACGGGAGAGAAAACCCGGGGTGCGTTGCTTGACGCGTA CGTTGCTGGGTACCACGCCGATGAGTTGGATCACAAAAAAGGATTCCGTG TGGCAGAAATCATCGAACATTACGAAGCATATGGTATCTATTGGACAAAT CACAACACCAATGATGACAAGAAATTACGCCAATGTATCATTCGATACTC CAGTCTCAACCAAATAAGAATTAATGAGATTGTCCAACGAAACTCAAAAA CACTCAAGGTGTGAAATTTATCTCTTTGAAAAGAATAATTAAGCTCTCCT GTACGCGTATATATTACCTCGATTTTCCGACAAAGATCGTCTAGGTCTTT TCATATTGTTGCTTGTATGTTATTAATTGTAATCAATGTATTTATCAAAT TCGAACCCAACtcctttgtttgcttttttatgattctgattgCATTCGGG GAGGGGTTGTATCACGATAACCAGTTAAATCGAAAAgtggtgcaagtggc tctggaTACGAGATTGTGTATTTGCAACCATAAGACCGTCGTACAGTAAC ATTTCTGTCTCTTTTGGATTTTAGCCAACATTCTTTAACACTCCTCTCAT ATATGTGTTTTTTCAGATGCCAGATAGGTCGATTTCATCAGAACGGAGCA CCAGTTTGATCGATGTTTCGTATCCGTGGTACATCGAGTCGGTGTGTGTG GCGAGTGGCTTCATTCTGCTTTTCCTTCTCTTTGGTGCGTTGAGAAGTCT TTGGAAGAAAAGAAAGTCTAACAAAGTTCACACTGAACGACAAATGAAGA AGGAGGAAGGTGAGGATTGTTTTAGGTGGCAAAGGTTGAAAAAACTTTCG AGAATTCAAACAACCCTGCCCCTTAACGAATAGACtgagaagatgaaaaa aatacaaagcgGGAGGGGAAAAAGGTCTTCCTGTATTCAGGAGTGTCTTT CGGGAAGAAATTGGATTGCTTTgtcttttgaaaagttttctgaTGCAGGG TTCtaataaagattttaatttGATTATAAGGGAACCTTGTTTATGATTCT GCATTTTGACCACTGCCTTCTTTGTAAATTTGTCTCTCAGACTTGGTGGA AGTACCAGCGGAGAGTTCAATGGAAGAACTTTTGGTTCGACAATGCAAAG AGATGGAGAAACTCATGGAATGGGAGGTTGACAACTTCATCCGAACTTGG agcaaaaaaaagaacgaaattcTCGACTTCACTTCAAACTACTCCAAAGT TAAAGATCCTTACGCCAAGTCTTGTGCGCTCTTTCAACAGAAGAAAGTAA CCGAAAAGAAACCAGCCGCTCAAAAGAATTGGTCTGTATTGAAGCAAAGA CAATCAGTGACAATCAACTCCTCTAATTGAGATCTTTTCATGTTGATGGA ATTGCTCAAATGTAAAATGATTGTTCAGCTGACTTCGAAATGGAAAACCA ACTTCTTTGCTTCTTTTCGTTGAGTTTTGGATAATCAAAATTGACTGGGG GAAAAATGTAACTATTAACTTTCTTCAAAGTTGCtacagaaattttaaaa atgaaaaaaatgatatcttgaaaattgtaaatttgaataaattgtaaatt tgaatGCACTACGGCTTGTATTGCATAAAAGCACCTGTTTGATTTGTCAG AGAGAAATGTACAAATAATTCTGGCATGCATTACTATATACGTAATGATT TCCTTCTTTGCTATTTCTCCTTCTTGGCTTGTCTTTACAGGAATTTTCAC GAGGGCTTTTACTGGACTATTATtcttaacaaataaaagaagaaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070830TCONS_00070830Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070830-proteinTCONS_00070830-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_58supercontigscaffold_58:798927..809622 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.91 8.07 5.76 6.59 4.13 2.95 10.07 12.27 14.8 14.56 14.77 14.91 4.35 3.91 1 0.95 6.59 7.71 10.91 13.61 20.51 20.23 6.68 8.55 9.18 13.32 0.94 0.78 1.55 1.33