XLOC_043942 (gene) - C. hemisphaerica

Overview
NameXLOC_043942
Unique NameXLOC_043942
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_57:141236..149065+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043942 ID=XLOC_043942|Name=XLOC_043942|organism=Clytia hemisphaerica|type=gene|length=7830bp|location=Sequence derived from alignment at scaffold_57:141236..149065+ (Clytia hemisphaerica)
TTTTGAtctattatcaaaatttttgtctATTAAATTAACTGAGATTTTTG TATCGAACACAAGATACTTTCACTTTAATAAAAAGCTGTCAAGGCttttc aaagtaaaattttgaagCATCGTAAATGTGCATTAGTCAACTTTCACACT AAAAATCAACACTCGCAAAATCAGCGACTTAAATATCGACGGTTAAATTC ATCGAGTGGTTTTTTGAAGTATTTGTCACATAATATACTGCGGTGTCTTG GATACATAAAATTGAGATTGAGgaaaaaagataagaaaatttcaaaatag aaacTTGAGAGTCAGAGTCAGAGAAAGTTGAACTTCAAATCCTCACCATG TTTACTGCtatatttatgattttattttatcaattcattttgattttaat aattATTGATGAAGATGATCCGGAAATGTATTGGATAACAAACCATCACA ATTCAATTTCAACGAATTTTCAATCTATATCTAGGAGGAATAACATCGAG TTTGAAAGTCATGGTTGGGCTGGTTAAAGACAAGAAGTCTATCTGGTGCC GTTTCTAATATCCAAACTTTTTCCACAACTCGTTTCGGACAACGTACGAA TTTTCTATAACCTGCTTCGGACAAATCGCAAATTATCCAAAACCCGTTTC GGACAGCTCACGCATTTTCCAAAACCCGTTTCGGACAACTCACGAATTTT CCATAACCCGTTTCGGACAAATCACGAATTCTCCATAACCCGTTTTGGGC AGCTCACTCACTCATGAATTTTCTTATCTAGATCTGGTTTTTGAGTTTGT AAGCCATGCTTGGGCTGGCTAAACATAAGATGAAGTTCTGGTGTAGAGTG ATATCATTACTAGGACTTTTATTTGGAATTGCTAACTTGCTTTGGTTTTG GTATTTGACGTATCGGATacaacaaattcaaaatggtagctatAGATTTG ATATCTCCATGGAAACTGGCGTGGTAATACGTCAAAATGGAGTAGGTAAG GATTTGGCATTCTTATCGAAACGGGAAGAATTCGTTGGAAATCCATTGGC GAAAAACTCAGATAATGTTGCCAAGAACTTAATTAAACCTTCTCCCGAAA ACAGGttattagatgctagaaataAAGACACTGTTGGAGAGTTTGTCCGA AAATCAGATGTCGACCCTTTGATAAAAGGGAACATTCGTTCAAAATCCAT CAGTGACAAAGCTGgtcaaaacaaagatgttgGGAGAGACGTTCAAATAG AAGCACCAGAATTGAGGACGATAGTTATAGGGAATGTTGACAAATTGACT GTAACAAAACGGCCAACTTTGTTATCACCCAGAAGAACTGATTCTCAGAC ATCGCTGAAATCACCAGAGAAGTTTCAACGTGAATCTGATCATATTGGTA AAAGAAATGAGCAGTCAAAATCGCCAAATCCAAGTGAATCTTTGATAAGG AGAACTTTGGTTTCACCAGAAACAAGGAAATCAGAAATAGAGAAAAGTAA AACTGGCGTTACCACAATGTCACCGAATCAAGCAACAACTGGCTCCACCA GAATCAATGAATCCAAACAATTTCAAACTAACGATGCATCAAATTCACAA AACAATAAACAAACTACCATATCTGGACATCAGACTCTGAATAGAGTTGT CAATACTGAGATCAAgccaaagaaaaatgaaaacgacCAAAGCCTACCAA CAAACTTGATATTGTTGAACCACAAAAGACAAGAACCTCACAATGACCca acaataaaaataacatcTCCAAAATCTACAGTATTTGGCCATCTCCAATC AAAAGATTCATCTCAAAGTAACCCAACAATAACCATTCCTACACCAGAAT CGACAACTGGTGGCAATCGTCAATCAAAAGTTTCACCTCAAAACGAACCA TCAAAAAAATCTCCaacaccagaatcaccaactcaaagcaattttaaACC ATCTCAACAATGCATTCTACCAGATCTAGATCCATTTCATCCAGATATTA GAAAGTATATTAATGTTGAATGGAGAACTGCTAAAAAATGTGGCATCAAA CAACATTGCCAGATCCTTCCTGGTGGAcggttgaaattgaaattaaagaa TGTCCAACGTGCTGGATTTTATTACATCCAGCGAGTCGATGATTTCAACG TCAAATTATCTAAATGGCATCCACTGAAACCAAGCGATGAAGAACTGACT GATATCAAACATGGTATGTGATTTTGTgttcttttttaactttctCGTGT ATAAAACGGCAGCTGTGCCAGGCCTAGATATCTTTCGTTAATCCATGGAA AAATGCTTGGTACTATCTTGTCCCCTATTTGATTCCCAGCTTATCAGTCT ATTTAACTGGGTCCCTGTAAAGCACTAATGTTAGAAATTTATTTGTATCG AGCTATTATACTTCTTGAAAGCTTTTACTATGTATTTTGGTGTCGCATTT TCATGAGACGAGCACAAAATTAGTCTGTTCTAAAAACAAATATATGAGAC AAGTAGGTCATATCttttttttcgataaaattttcataaatatttcagtt tttCGACCCGCTGGACTGGACATTTTTGTCACCCCGGAAGGTTCATCCTC CAGCATGAATGAATTTCTTAACAAATAAAACGAATCTTTGTCTTCTCTGG CAGGTGAAGAAAGATGTCTTCGTGTATTTCAAGGAAACTTTGCAGTTATT GTTCAGAAAGATGGGAGCTTAGCTACTTCAGATGATTGGAAACTAAGCTG CAAACGATCACGTCAGTTCACCTTCGGCAAAAATGGACAAATTTATCTAG CAAATTCAAAGAAATGCCTTCAGCTTATTGGCGGTAAGGTTTTAGTTCAT GTATAGCTAACCACACAAATATAAACTTCACTAAACCCAAAAGAATACAA AATTCTCTGATCTGCCATACTAATTTTCCAGGGAAAATTTGACCTCCTCT ACTTTCGAGTAGATAGCTATTAAAACATTACGGCTTGGAATCGCTCCGAG ATGGTCTTTGTTGAAAACAAAgtgtttcggaacgtttcgaaACATAAAAA ACGGCCGAGTATTTTCCCTTTCGATAAAAAAATCGTTAAGCAAAAACATT TCGATCCATTTTGCTTTCTAACATCTTGTTTTTCACGTTTCGAATATTTG GTATCAACACATTGTATCGAAAACGGTACGACGTTTTGTAACGATACTGG AATGTAATGGCTAAACGTGGTTTAATCTGACCATAGTTGTATGTTATCTT TTTAGGATTGCCTAGTACTTACCAAACATCGATACAGCTCCACACAGTAC TGATCGTTTCTGTTTCATGCATAACCTTTTACTCTCATTAGAAACACTGA AGTTTGCCAACACATCAAAATGCAATCAGAAAGATTCAACATTTCTCATC CAGCAGAACGGGAATATCGAACATATTTCTACCAGCaaatgtattttaca gaccggaaaaacgTTCAAGTTAGACACGTGTGATTCTTACACTGCAAGAT TTTTCGTACAGTCAATTGGAAACGAGACACAATCAATAGGTAATagctat tttattttttaacctAAATGAGTTTTTCGTAGAATCAATCTCTTTATAAT CGAGTTATCAGCATATGAGAGGGTTAACAAATTACCAAATTATAGATAAA TATATAGATAAATCTGCCTGCTTCCTTGAAATTTGGGCAGCCGCCCATCA TGAATACACCCTAACAATCCTGATGAACACAAACGAATTGGGTTtgacca tagtccgtataaaaactctgttctggaagcttattgttttaattttttgc tagctttttcctttgttaatatcaaaacataaaaatcgatttgctcaatt tttgatcacgttaccaagtattcctcttgggattggtttaagatttaatc acatgatcaaaaagcgaGTAAaataaactaatttctcaaacgcaagttca agtCAGAAACAAttaaatggaaagaaacaaaaggcttccagaccaggaTT TTTTATAGTGACTATGGTTTGACTTTATCAGATGAATGACATCAAAATTC TGTGTCTTTGATAATGATGATATCAATGGGACGACTTCAAGCATTTCACG TCAAGTCTCTCTGGTTATCATTTATTCAGTCttgttccctgcgtattatc ggcttttttatgcttactgatagcgctaccGCCagataataccgagttta tgtatttgtgtttttcagcgacagagacggtaaggttttagtttgactag atcctgatcaactggggacgacggtaaatcagtacttttaccgtcctcga ttttgcgggtcagaactgtggtttattccaaatcacttcagtcagtcact ttaccgtctccaaaagtgcaaatacctGAACTCGCTAATACCTTGGCTTT GTCTGGTATTGGAACACGTATAATTATGCAATTCGAAAACAAAACGTCAC ATCTCATTTGTTCTTGGATTATGAAACAATAACATTGACATGACATCCTC GCACTGTTCAGATGagatgaagtttttataagatactatTATAATTCATT ATTTGAAGTAAGAATgacgcattctttagaaaaagtaacaaaattgtttt attacttgttaacgaccaaccaaattaaataagagcttgtaaaaactcca tctcgtcccgtaCTGTCAGATATTTTATGACgtatcagccaacaccaggg tattctcttgCGTCCATTGGTAACGTAAATCAAGCCTGGAAAACATATTT ACGAGGTCGACTCTAATATCAAAACATCTAAATCCTAATGCTTTAAAGAG TTGTTAgatgtaccttatcggggaaaaatatgtcgggggaaagtgacgaa aattttgaaggggtgacgaaatttttccccggcgaaaaaaaaaccgacta aataaaactccgacatttttttccccgataaggtatatcagATAAAACAA CATTTATGTTTTAATctcttcttcgtttttagaTATCGATAAAGAGATCC AACTGGAAGAAGATTTCATACTTGTCGATATCATACACAACCATAAATCA AGTTACGAATTCCACATGTTTCCTGTCCGGAAAAAGACAAAACTGTCCGA AAATATTCGTTCTCGAAGGCGAGATGACCAGCTGAATGTTATTATGGTCA TGTCTGATTCGATTTCGAACTCGGATGCTCAACGTTATTTGAAAAAGACG TATTCCATGTTAAAGAAAAATGCTGATTCAGTGATTTTAGAGGTAAATAA TTGTCTACCGCCGGCTTCTATGACTTATTATTTTCTTActaggcgaggcc aatttaatttgttgttttacgggccaagctacccaaaataGAGGTTCGTT CGGTTGgcgtaaaaataaaattaaaagtagaatttcacctataaaatctc ctaaaaagatACAATAAGCTTGAATTCatagataaaatgaaaaattgaac ataaaattctcgaaaccttggaaaaactaccaagattttgaaaatctagC AGTCTGTTTTAAGTaatgtaaataatttttttttcgatttttgaaatttc agaatcggtcgggcccgtaaaacaactaatcaaattgatCTCGCCCTGTG CGAAAACTCTTGGTCCATTGGATAGTTATTGGGTAGTTTATacgttttaa aagattttttatcaTGTGGCAGAATTTTGTTCACCTATTTTAATTATCGT AAACGAGAAAATGACCACGTGAAAAAAGGTAGTCTAAATTAGGTGTTTAA TTTAGAAGGTTTTCTCAAATGGATTTAAAACGTACAGGTTTTTCTCTTCA CAAACAAGAACGTCCAAAATTTCGGaagctcttaactttttgagtttcaa gcctaaaaatgtttcgaAAATGATCTTCGCTATTTGTGATTGTTGTTGTg cgatttcctaagaaatttaatgATATAGaatccgcgaagccttaaagtTA TTCCtaaattgttttaaatattttggccatcaaagtcttgttttttatat agtttgtttttatagaaaaaaacgtgtattctctAACCAGCTTATGTTAT TGATTTTCAGGGACATACGATCAACGGAGACGGTACAACACCTCAACTCT GCACGCTATTGGTCGGTAAACAAGAACACGAATTACCTGAAGCACGGCGT GGTTTTCCAAACTCTCAAACGGTCGATCGCTGGAATTTCATATTCAACGA TTTTCGTAAAAAAGGTATTTACAATCAACACCAACTCGAATGAGTTTTTA TAACAATTTTACAtagaaaactcaaaaaactttggATATGGGTAAAAATG AAAGCAGAAATATGGACCATCACAATCAGTTTTGTTTTTCATTGCGGCTT CAAGCCTCTGTTCGCTTCGCCTGGTTTGGCCCGTGAAATAACTTTTTGAC TCACCGCTTTAGCTACTATACAAAATATTGGCAAGCAATATTTGACATGA TGTACAAAGTAAAAAACTAATACTCttttaaaagtgaattttctttctgt aaacaatccccttATATTTTGAGAATATTGCGGACATccttcaatatatt gccggcactcAGCAATTTCCCGGCAATATGTTATTGTAGTGTTGTAGCCC TATAATTAGTAGCTAAGTATTTTTTTCTCCCCATTACTCCATAGGATATA CAACTCTATTCAGTGAAGACGAAGCATGGGTCAACGCCTTTCACTATCGC CTTCACGGTTTCAAGAACCCGCCCACTGATAAATATTTACGCCCATGGTG GATAGCAGCTGACCGATATGTCAGAGAAAATTCGGGTGGATCTATATCAT GCCCGTTTGAGCTCGGCTTCAAATATCTGAAGAACTTTTTACAGGAATAC AAAAACGTACCCAGTTTCTCATACACTGTTTCGTCCGCGCTGACACATCA AGAGCCCGCGCGTATTGCGCTCGTGGATTCCGATATTACCGATTTGTTCA CATTTCTAGAAAAATCGGGTTATCGGAATAACAGCTTGATTCTCATACAT GGCGATCATGGTGACACGACATCGAAATTCCGAAGCACGGTGCAAGGGAA ATTAGAAGAGCGTCTTCCATTTGTCTCGATCACTCTCCCGCCATGGTTTA AGAAACGAAATCCGGAAAAATTCCGAAACTTAAAACGGAATTCGAAGCTT TTGACCACTTATTATGATATTTATACCACCTTTAAAGAAATCCTTGGAAT TGATACAAAGCATAAATACGGAACGAGTTTGTTTACAGATTTGACACCTT TAAATCGGACGTGTCAAAAAGCTGGGATTGATGAGCACTGGTGTCCTTGC CTCACTTATACAAACATTAATGTCTTAAACTCGATTGTTCAAACAATTGC TGGAGAGCTAGTGCAGAATATTAATACACGTTTTcagaaatataatgaaa gccgaACTCAATGCGAGCAACTTCGGTTGAGTAAGGTTTTGAGGGCAAGC CGTCAATTACCAAATAAGAAAGTTCAACTTTTCGAGAAAACATTACGGAC AGCAGAATGCGATAATTGTGAgatcaaattaaattcaaattttacgGCAA CCGAAATTAAATATGAGATTGTGTTTGAAGTGTTACCTAGTAATGGTGTA TTCGAAGGCTCAGTGGAGTATAATGTGAAGACATCTAAAGTTACGGTAAA CGAAAATATCAGCCGTTTGAATATGTATGGAAAGCAACCAGAGTGCATTG CGAGAAAATATCCTTACTTAAGACCGTTCTGTTATTGCAGACATTAGCTT TTATGTTGTTTTAATTGGTGtggaaaattaaataaagatatttttggtgc ataaagaatgttttaaagtgtttttctcaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070619TCONS_00070619Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070619-proteinTCONS_00070619-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:141236..149065 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.22 5.58 5.84 6.09 47.38 38.52 55.97 59.15 25.14 33.79 31.73 19.09 4.81 4.54 4.1 5.38 9.04 10.82 6.94 8.07 9.38 9.49 7.13 9.14 37.51 26.49 11.89 14.54 5.84 6.59