XLOC_043902 (gene) - C. hemisphaerica

Overview
NameXLOC_043902
Unique NameXLOC_043902
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_56:556644..565993-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043902 ID=XLOC_043902|Name=XLOC_043902|organism=Clytia hemisphaerica|type=gene|length=9350bp|location=Sequence derived from alignment at scaffold_56:556644..565993- (Clytia hemisphaerica)
GAAAGATTTAGATACAGAAAGGAGGAAATAAGTAACTATCAAACGAACAT TTCAAAAAAATATAACATGGCAAGCATAGCCATAACGGCTGTTTTACTAC AGCTTTTAATCATCCGGGTATGGTGTATACCGGACCTGATCAAAAAGTCT CCGAATGGAGACTCGGAAGCACAATACGGTAAAAGTCTTTTCGATGATAG GAAATATAACGATAATGATCCGACAAAGGAGTTTGTTACAGATCAACTAA GTATATCAATTAAGAAAGCTGGTATCAATTGGAATGGTTTTAAATTTTTT GGCCTTGATTTCAATCAACCGGATCAAATTGGAGGCGATGTCAAGGTAAA AAGCATTCTTATCCATTTACGAAAACGCTTTTCTTGTTACTACCTTATTA CACGAATATTACTAGGCAAGTATTCAACGGCCTTGAAATTAACACGCAAA AAATTAACACGAATTTTACTTGCTTTTTCAAGGACACCACGGCTGGTTTT AATTAAAGGGATTTTAATTAACACGAAATTTCTTAATTCGTGTTAATTAC ATGTCTACTCATTTCCATGTCTACTTATTTCCATGTAATAGGGTAATTCC ATGCGCTTCCCTACTAACGGTTTTACGTACTCTGAACTTTATTTTCAAAA CGCTTTTTATCTTTCCCTCACGGTACTTATTCGTTCTTGTACCCATTTTA AGCATTACTTTTAAGAGTCTCCTCCAGCTATTTTTCCATTGCATGAATTT AGTCTCTTGTTGATAACTCGAGCGCATGAAATACAAATTTATTTGGATGG GTAGGTGTTCTCTAGTCTCGAAAGTTAGGGGCAAATAAATGTGGCGACAA CTGAGTTCAAGATTCGAGAATGGCTCTGCCGAATGAATGTACTGCAGTAA ATCCATCTTAATTCTTTCTTTTGTATCTGATCTTAGATTCATTTTAATGG ATTCCTTACATTTGGTTCTGAATCAACAAAAGAAGCCACAGCTGGAAAAT GTATCCGTGTTGGATTTGAATCGAATTTCTTGGCTCCTTACTGGATGCGC TATTTCAAAGGATCAGTACGTGTGTTTGAGCTCGGCAAAACCGGTCAAGC AAAGACAGATCGAGAAAATATCATAAAGGATCTCTTCAAAGCAGGGATTC TGGCCAACCCTAGCAAAAAGGCCACAAGTGAAGCGAGAATCATTGTTTTG ACTTGGCTCAAAATGAGATCTAGTGGAACATATGATCCTTCCTTACAAAA ATGGGGTGTAAGTTATTTATAAATGATAAGCTTATTCTGAGACTTTGGTT AGGTTACAGTGTTAAAACTTCTTCCATCTTAGGCGGATTTCCGTCTCAGT GAAGTATATAATATATCCGTCTCAAAATTAACATATTCCACCAATATTTT AAGGATATGTCCTAATTTGCAGCAATATTTTAAGGATATGTCCTAATTTG CAGCAATATTTTAAGGATATGTCCTAATTTGCAGCAAAATCCATTTTCCG TCTCAGACCAAAAAACTTTGCTTTGACAACTGGAGTTAAGAATAGATTTA GATTTTTAAGCCTCTCGCGATAAGACGTTAATAACCAAAAAATTCGTAAG TATTTTCTTATAAGGAAATTGACACCGAAATGATCTTCCAACAACGAGGA CCTAAAGCTGAGAAACTTGACACCAAAATGATTTTCTAACGAGGACCTTA AGCTGCTATTGGACCGCATTGGTCTGATAGGTTATAGGTGTAGTCAATCT TATATAAACGCTTTTATCTTCTTTCTTTAGAAAGGATTCAAGAACACATT TCAAATGTTTGTCATTCTCCACGCAGGAGAGACATACATCAAATACTATT ACCGATCGTTGGATACCAACAAGATTTTTGTCGGTGGGATAGTGCCTTGC TATGGAAGGGTAAGTTTATTTGCCATCTACACGTTTTTTATATAAGAACA TCCAAAATTTTTGAAGCCTTCGGATGTTCTTAACTTTTTGAGATTTAAGC CTAAAAATGTTCTTAACATGTTCTTATTTTCACCATTTTGCAAGTATTTT TGCCCATTTCCTAAAAATTGGGTGTTCTAAGGTCTGCAAAGCCTTAATAT GCTATTAACTTTTTGGCCATCGAAGCATTTTCCTAAGAAATTGGCTGTCC TCAAAGCCTTAAAATGTTCTAAACTTGTTCTTAATATTTTGGCCATCGAA GCCTTATGCTCTTATATGGTTTGTTCTTATAAAAGAACGTGTATTCTTTA AATGTTATACACACTATGAGAACAACGAGGCTCGAAATCTTCAAAAATAG GAAAAGTACAAGAACAATTCTGAGCCTGGAATTACTGAATTTCAATCAAT TTAGGATAGTCAAAGTAGTAAAAATTTAGAATTATGCTTAAAATACCCCA ATCTCACCTTATAAATTTCGTCTCTGACAAAAGCCCTGCTTTGACAACTT TAGAACCCTTTAGAAGCCCAGTGTCGATTTGCATTTAATTTTTCTTTTTT CTGAGTTCCCCGGTGGCACAGCTCCTCAGACTAAATTTGTAAACTGTTTT AAATAAATTTTTTAGATTGGTATTTCAAGATACAGGCAAAACGTAGATCC AAAATCTTGTAAACTGGAAAGGAACTCTTTCGGAATTGACAACTTATCTG GAAAATTGAATAAAATTCCGCAAAAGGTATTTTTCTTAAAGTGATTTTTA CACGTTCTTTTTACGCATTAAAAAAGAACCCTTTATGTAATTTTGGGTCC GGGATGGTGCCCGACCTAGGTAGGTAGGCTATGTAATTTTATCGGATCAT TTGAAATCGTGGATATTTTCTAAACTTATCGACAAATTCTCGCCTTATAT TCACTTCGCTTTATTTTATCGTACATTAGTGTCCAGAGCCCATTCGCTTC AAGTGTGCAATAATCTTGTTCTTGCCTTCTTTTTCCCAACCCGAGGTTCA ATTTTAACATATNTGTGCAATAATCTTGTTCTTGCCTTCTTTTTCCCAAC CCATGGTTCAATTTTAACATATTATATAGGTACCGCAGTTTCGGAGGAAA ATAATTCACTGTATTAAAAAAAAAAAAGAAATGAAATGAATCTTATCCTT TAGGTACCTGAAGTCCCTAATTTCAGATATACAATCTTTTGTTCCTTAAT AGATCGAATATTATTCAAATGAAGGGAACGATGGCGATATGGGAAGTTGG AGTTTCCGTGTCAGCCCAAAGCAATGTGAGTAAATAATGTAGATGTCTTC CAGTTTTGCTAAGATTGTGTAGTAAGTCTGCGACCGTAGTCGGAAGCGAC CCGAAGGCTCCTCTTTTGATAGCTATCTACCCGAAGGTAGGGGAGGGCGG CGCTCTTTCTCACTGGATTGCTCCACTTACCCTTGATCCTTCTCTTAATT GCTGAGCATCAAGCAGAGATGCATTAAGTATCATTTTGATAATCTTTGGT ATGACTCGGCTGGGGGTTGAACCCACAACCTTGCGAACCGTAGTNATATC ATTTTGAGAATCTTTGGTATGACTTGGCTGGGGGTTGAACCCACAACCTT GCGAACCGTAGTGCAGTGGTAGAGCATCCGGCTACGGACTTAGCGGGAAA TGAATAATTGTAGAAAAGATTCGAATTTGAAGAAGGGATTTTAGAATAGT TTTCTTTTGATACAAATCACGCAAATTGGCTAAACCTGAAAGACCTCTCT TTAGAATAGATCGCGTGCTCATACCAGAAGGATTTGAATGTGTTACTTTT AAAGTCGTTGCATTGATGTTTTCACATATACATACAGGGATATTTAGGGT CATTCAACTCAAGTGAACTCAAAACTGATTCACTTTTGGCGTTAATTTTA GTAGGTTTAATCAACTCGATGAGTTATTTGGGTCCTTGTTTCTGGTCTTT TCGCTATTTATATCCTTATAATTTCAAGTGTGACTTAAAAATTCAGACTG TTTTTTTTGGAGGGCTAATCAATCAGTTTAAAGGTTTTGTTTTTAAATAA GAGTGATATCGTTTGCTTACTCATCAATTTTAATTTACAAGCTTTTTGAT ATTGAATTAACACGGATGCGGAGCAAGATTGGTGAGAGGAAGGAAAAACA ATTTTTTTTGTTTATTCAGCACAATATAACAATACAAAGACACTGTCCTG GTATGAAACATGTGCTTGATATGAAACAGGAACACTTATGTAAAAATGAA ATCTTTAAAATACATCTCATTATTTCTATACATTTCAACCTTAGGTAAGC AAAAGCTTGATGTTGGCGAGTACTGTACAAAACGTGACAAAACGCATTTC AAATGTGATTATCGACAAAAGGCGATTGGTTGTTTAGAAGTGGAAGAGGG CGGTGGGCGTTGTGTGTTAAAGAAGAGCCCGGGGAGAGGTAGACGGTCTC TCTCTTCAGCGCAAATACAAAAGAACGTTGACCGGTTTTGTGAGTTTCGT GACGATGGGGATTTCGTGTTTCCGTTGAAATGCCGTATTTACATCAACTG TTTTGAAGGGAAAGCATCGTTTGCGTCGTGTGCTGACGGGGAGCGTTTTC ATCCTGAACTCAGGAAATGTGTAAAAGCTGCGGATGTTGATTGTGAAACA CCTGGATTGAAAACACAAGAAGGTATTTGAAATTTTTTATAACTTAAGTT GCACTAGGATACAATAATGACATAAGATTCTAACCCAATAACCTTCTTTT ATCAGAATGTATTTGTGCGCCATTTAAATTACTTTGAATTGGTTGCCCTA TAACTCGTGACAAGATTTCCGACTTTTTTGACTTGCTTCAAAATATAAAA GGGAACTCAGATAATACCAATAATATTCCATTTTCCAAACAAGATTAAAG GTTTTGTTTTTAAATAAGAGTGATATCGTTTGCTTACTCATCAATTTTAA TTCACAAGCTTTTTCACATTGGATTGACACGAATGTGGAGCAAGATTTGT CAAAAAGAGGAAAAGAAAAACATTTTTTTGCTTATATCAGCATAACATAA CAATAGGTAGACACTGTCCTGGTATGAAATATGTCTGATATGAAACGGAA ACACTTACGTAAAAATAAAACCTTTAAGCTGCTCTACTACTTTTCAATAT TTTCCTTTTTGTAGTATTTCAAGTCAAGACCGAAATCAAACGTTCAAAGC TTCGAGAAATAATCCCCATAGTGCACAAATTTTACTCCGTCACTCTCGAT ATTAAACCTAAAACACCTGCTCGTGGTGGGTGGAATAGTGTTTTCCACGC TACTATCAAGTCAAGTTGGACATACTACGGTGATAGAACGCCCAGTATAG TTATGCACAAAGATACTACAAAGTTACAGGTAATTTGAATTTTTTACTAG TGATATTTTGTATGCCGTTTTTTAGGAACCTGCGATGAAATATAGACGTT ATTGCCGCTGCAAATACGAGAGAGTATTTTGAACTAGAATTTTCACTTAA GTCCGCGTAATGGTTTAACATAGTCTTTTTGAAAGCTTTTTTTTTAAGAT CATTTTTATAATTTTACACTCCTGATTATCTTTCAACACCACGAAACAAC TATCTTTATTGGAATTATAGTAAAAGTTGCCTTTTTCGAGACAAATTTAT AATCGCGTAACCTAGTATCAAGTGTAAAAAGTTATTCCGTCTAGGACGGG TTTCCGTCTCAGAGAAAAATAAAAGGTCACTAATAAATTCTGCGTATTTC ACCAAAATTTCAAGAAAATGTGCTAATTTGCTGTGTAAGATTTATTCTAT CTCAGAAAAAGACAAATAACCTTGCTTTGACCATGGAGTATTGCTTTTTA CCATTGTGTTTTTTGATTTTCAGTTTTGTGGACCTCTCAACTATCCAAAT CCAATTCTATGTCAAAGTCCTGCTCCACCAATACCTCTTAACAAATTTAC CAAGATTAAGATCCAACAAATTCCCAACGGAGATGATTCCAAATTCATTG TTTACATCAATGGAAAAACTGTTTGGACAGCTACACCAAACTATCCAACC ATGTTTTCGAACGTGAAAGTTTATGAAGGGGATCCATATTTCCCTGCTGC TAACATTGAAACCAAGAACTATAAATTTCAATCAGGTAGCTAACTCTCTA GTTTTTGGGTGTGCTTCCAGCACGTGTCGAAAATTCTATTTTTTTTTAAT GGTGAATAATGCCTACGAAAGGTTGAAATTTCCTTATTTCCCTGCTGCTA ACATTGAAACCAAGAATTATAAGTTTCAATCAGGTAACTCTCTAGTTTTT GGGTGTGCTTCCAGCACGTGTCGAAAATTCTAAATTTTTTTAATGGTGAA TAATGCCTACGAAAGGTTGAAATTTCCTTATTTCCCTGCTGGTAACATTG AAACCAAGAATTATAAGTTTCAATCAGGTAACTCTCTAGTTTTTGGGTGT GCTTCCAGCACGTGTCGAAAATTCGAACTTCTTTTAGTGGTGAATAATGC CTACGAAAGGTTGAAATATCCTTATTTCCCTGCTGCTAACATTGAAACCA AGAATTATAAGTTTCAATCAGGTAACTCTCTGTTTTTTGGGTGTGCTTCC AGCACGTGTCGAAAATTCGAATTTTTTTTAATGGTGAATAATGCCTACGA AAGGTTGAAATATCCTTATTTCCCTGCTGCTAACACATTGAAACCAAGAA TTATAAGTTTCAATCAGGTAACTCTCTGTTTTTTGGTGTGTCTCCAGCAC GTGTAAATTTCAGTCAGGTAATTCTAACTTCTGAGAAACTGAACTTCAAC TTTTGTTCAAACAAGTCAAATAACTACAAAAAAAGGATTTCTATAGGAAA GTTTTTTATTTCATTCCAAAAGACTTCATTCAGATGTTATAATAATATTA AGCCGCCGTTTCAAACCAATAATTTTTTGTCCGCTTAGTTTTAGTTTAAT AGAGATCTAAAAAGAGTGTTCTCTAGTATACGGTAAAAAAAATAATATTG AACACTATTCTTTAAACTTCTACAATTCTTCATCTTAGGGATCACTGCAG GTCACGTCCTTGAAACTGTCAAGAAACTGCAAAACATGTGGACACTCAAA CTCGCCATCATTCCCGTCAAAACACAAAACGGTGACACAAGCATTCTCCA CGCTACACCTTACTTCGATAGCCGTACAGTGGGAGAACTAAAAATCGATT TCCTTGATAAAACAACCAGGCTTCGTATCTGTGTACCGTCGCTCTCGACA TCTTATACACCCTACTGCATCACATTCCCACGCTCCTTACCACTAAGCAA GTTGGCAAAGATCCAGATTCGCCGTCGACCAGCAGTCTCTGGAACTGATT ACATTATCCATTTGAACGGGGAACAGAAATACAAGTTTAACGATCCAACA CCAAATAAAGTTGATGATGTAAATATGTATCTCTCTGATCCTTTCATGGC GCCCGCTAATGCTGTTCTGGAAGCATACCAATTCAATAATGGTAAGTATA AGAGGATGACCCTTCAAGAATTGTGGAGACTCTAAGTTTAACTTGAATCT CTATAACTGGAATGTTCTTAACTCGAACAGGTTTTATTGTCCATTAAGTT AACAATGCCTTCAATAAACCTTACTCCTTACTCGAAATTTCCTTATATAA CTTGATATACTTGCTCCTTGCGAGCTCCGTAAGTGAATACCTGAGTTGTT TTTTCGTTTTTTTTTGGAAAAAAATATTTTTTGGGAACGAGATTTTTACT GCTATGAGATATTGAGCAATCCTTCACTTATAAATCCGTTTAAATCTTTA CATTGTTGTCAACTTCTCTCTCCAGGCGTTCAGAAAGGTCACGTCATAGA TGAAAAATCCAGTCTCGGCCCAGCCTGGAAACTCAATCTTAAGATCACCA TAACCAACACACAGCATACGGGCTGGATCAACATTCTACACGCTGTCAAC AATGGTGTCTCAAGTGATTTATTGTTTTATGTTTTCATTCAACCGAGAAC AACACGCCCATACATCTGTACCGCCCTCAAACAAGGTGGCGCCAACCTAT GTACATCCACGTCATCGCTATCCTTGAATAGACCAACTTTGATTGAAATA GATCATTTTCAATCTTCTGGGAAATATTACTATCAGATGACTGTTGGTGG ACAAGCAGTGTATTTGGATGCGAGCAAAAGGCGACCAAAACCCATTCTGA ATGCAAATCCAAGGACATTTGAAAATGTGGTTGTTTATGCGTCAAGCCCT TACTATAACAAACCTTCTGACAATGTAGAAATTAGTGGATATAGTTTAGT GCAAAACGTTGATCGGTTTTAATCGGATTAATTTTCGTGAACCAAAAAAA CAAAAAAAGAAAAGATTTATTTTCGCGAATTGGCATTAAGAAAAATTCGA ATCAGTCGAAATAACGAAACTGGCCCCGAAAACGCCCAAATGAGCACGAA AATAANTTCCTTACTCGAAATTTCCTTAACTTGATATACTTGCTCCTTGC GAGCTCCGTAAGTGAATACCTGAGTTGTTTTTTCGTTTTTTTTTGGAAAA AAATATTCTTTGGGAACGAGATTTTTACTGCTATGAGATATTGAGCAATC CTTCACTTATAAATCCGTTTAAATCTTTACATTGTTGTCAACTTCTCTCT CCAGGCGTTCAGAAAGGTCACGTCATAGATGAAAAATCCAGTCTCGGCCC AGCCTGGAAACTCAATCTTAAGATCACCATAACCAACACACAGCATACGG GCTGGATCAACATTCTACACGCTGTCAACAATGGTGTCTCAAGTGATTTA TTGTTTTATGTTTTCATTCAACCGAGAACAACACGCCCATACATCTGTAC CGCCCTCAAACAAGGTGGCGCCAACCTATGTACATCCACGTCATCGCTAT CCTTGAATAGACCAACTTTGATTGAAATAGATCATTTTCAATCTTCTGGG AAATATTACTATCAGATGACTGTTGGTGGACAAGCAGTGTATTTGGATGC GAGCAAAAGGCGACCAAAACCCATTCTGAATGCAAATCCAAGGACATTTG AAAATGTGGTTGTTTATGCGTCAAGCCCTTACTATAACGAACCTTCTGAC AATGTAGAAATTAGTGGATATAGTTTAGTGCAAAACGTTGATCGGTTTTA ATCGGATTAATTTTCGTGAACCAAAAAAACAAAAAAAGAAAAGATTTATT TTCGCGAATTGGCATTAAGAAAAATTCGAATCAGTCGAAATAACGAAACT GGCCCCGAAAACGCCCAAATGAGCACGAAAATAAGTGCGATTAAAGTAGA ACATTTTAACCAATATTCGAACCAGAGTTGTACTTTCTCTTTATATTTCT TATGTATATGTTTCTTATGTATCTTTTTGCATTATAGTACGATTGTGTAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070534TCONS_00070534Clytia hemisphaericatranscript
TCONS_00070533TCONS_00070533Clytia hemisphaericatranscript
TCONS_00070532TCONS_00070532Clytia hemisphaericatranscript
TCONS_00070531TCONS_00070531Clytia hemisphaericatranscript
TCONS_00070530TCONS_00070530Clytia hemisphaericatranscript
TCONS_00070529TCONS_00070529Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070530-proteinTCONS_00070530-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_56supercontigscaffold_56:556644..565993 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.25 0.27 0.1 0.09 0.37 0.04 0.16 0.18 0.03 0.38 0.02 0.12 57.2 17.95 0.65 1.75 0.33 14.41 0.68 1.91 0.18 0.06 0.22 0.21 0.99 0.97 0.04 0.05 0.26 0.27