XLOC_043884 (gene) - C. hemisphaerica

Overview
NameXLOC_043884
Unique NameXLOC_043884
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_56:858684..863222+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043884 ID=XLOC_043884|Name=XLOC_043884|organism=Clytia hemisphaerica|type=gene|length=4539bp|location=Sequence derived from alignment at scaffold_56:858684..863222+ (Clytia hemisphaerica)
gaaaatttcaacttttataaagaatttcttttatcaaaaattcaactgta
atactttttataaaaaattccacgaataAAATAATACTATAAcatattca
aaaaacatttagaGACATCTAAAAATAAATAGTTATCTAAACATTAATTT
AAAATTGAGCCTAAAATATAATAGATCGTAAACTAATCGATCCCTAATAC
ATGCTAAACAACCAAACCATTTATGTAAAATTCTTAATCTACGCACTTAA
ACTTACTAAAGGGTAGtcgtcaaaaactttcaagtttGTGAATCGAGAAA
GCGAGATGGCTGTAAAAAAAACCCTCACAAATAGCAAAAGTGCATGAGGT
AAATATGTAgaaaatggcttaaaaattatttccgtTATAAGTTACACGGT
GTGGCATTAGAATCTCGCTTTTTCTTACTTGAGAAAAGGTCACTAGCAAC
TTGAGTTTTTACTTTATTGGTAGTAGAGGTATAAAACAGAGTGGTTGCAA
GGAATAAGGTAGGCCACATTCTTCAATTCATTACGAGATACAAAAACACT
TTAGTAGGGGGTCAAACATCTTATGAAAAGATCATCAAAGGTGTTCAAAA
ATCAGCAAATGACCAGGCTGGTAAATTTCCCTAtattacaaaataaaatt
cGTTCTCTCTAAAAATCCCACTCACAAAGCACTTTTGTGTTACCAAAAAC
ATAATCGAATGATTGtctgtaaagtttttatttctcattttccaTCGAAT
TTCGAATTTAACCTCTCTGTCGTTCAATTATATCTTTCTTCTGACGTGCA
GCACATCCACTTGGGCAAATATTACCCTGGCAAGGCTGTGGACACATTGG
AGGATAAATGTTCGTTGTTTGAGGGCAGCCACCTGGACAAGATGGCGGCA
TGCAAGGCTGTGGACACATGTTAACGGTCGATTGTACTACGGTGCACCCC
TGTGGACAGATGTGAGGCGGGCAAGGCGTTGGACAGCTGGATGGCGTCAT
TGCAGTTGTGGTAGGACAGTATGCTGGACAACTTGGTGGTTGACATGGCT
GTGGACATGATGGGATAAGACAGTTTGCAGGGCAAAATGGCGGGATACAA
GGAGACGGACAGGCCGGTGCTTGAGGTGCTGGCATCTGCTGTTGAAGTTT
ACTTGGAGAAAAATAAAACCTTGGAGATTCTTGACAGCCAGATGGACAGC
CTGGTGGTTGACAAGGTTGTGGACACATTGTTGGAGCGGAAGCCATGGTT
TGCGGGCAACCCATAGGGCACCCTGGAGCTTGGCAGGGTTGTGGGCACAT
CTGTGGAGCAGCCATCATGGGAGGTTGCATCATCATAGCGGCACCTTGTG
CACATCCTGAGGGGCACGATGGTGGCATGCATGGTCTTGGACACATCGAT
GGAGCTGAAGCCATGGTCTGTGGGCATCCCATTGGACAGGAGGGTGCTTG
ACAAGGTTGTGGACACATTGTTGGAGCGGAAGCCATGGTTTGCGGGCAAC
CCATAGGGCACCCTGGAGCTTGGCAGGGTTGCGGGCACATCTGTGGAGCA
GCCATCATGGGAGGTTGCATCATCATAGCGGCACCTTGTGCACATCCTGA
GGGGCACGATGGTGGCGTGCATGGTCTTGGACACATCGATGGAGCTGAAG
CCATGGTCTGTGGGCATCCCATTGGACAGGAGGGTGCTTGACAAGGTTGT
GGGCACATTTGAGGTGCAGGCATCATGGGAGGAGGCATCATCATAGCCGC
GCCCTGTGCACATCCCGTGGGGCATGAGGGAGGCATGCATGGTCTTGGAC
ACATTGATGGTGCCGAAGCCATGGTTTGTGGGCATCCCATTGGACAAGAA
GGTGCCTGACAAGGTTGAGGGCACATCTGTGGAGCAGCCATCATTGGAGC
GGCTTGCATACAGCCAGTTGGACAAGATGGAGGCATACAGGGCTGTGGAC
ACATCGAAGGCATAGAAGCCATGGTCATGGGGCAACCCATTGGGCAACCT
GGAGCTTGACAAGGTTGTGGACACATCATCGGTTGAGGTGGTGACATTTG
CTGAAGGAGCTTCTCTGGCGAGAAATAAAATCGTGGCGACTCTTGACATC
CAGAAGGACAGCCTGGTTGTTGACAGGGCTGTGGACACATTGTTGGAGCT
GAAGCCATGGTTTGCGGGCATCCCATAGGGCACCCTGGAGCTTGGCAAGG
TTGTGGGCACATCTGTGGAGCAGCCATCATGGGAGGTGGCATCATCATAG
CGGCACCCTGGGCACATCCTGAGGGGCACGATGGTGGCATGCATGGTCTT
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCGTTCTGTGGAGCAGCCATCATGGGAGGTGGCATCATCATAGCGGC
ACCCTGGGCACATCCTGAGGGGCACGATGGTGGCATGCATGGTCTTGGAC
ACATTGTTGGAGCTGAAGCCATGGTCTGCGGGCATCCCATAGGGCACCCT
GGAGCTTGGCAGGGTTGTGGGCACATCTGTGGAGCAGCCATCATGGGAGG
TGGCATCATCATAGCGGCACCCTGGGCACATCCTGAGGGGCACGATGGTG
GCATGCATGGTCTTGGACACATTGATGGTGCGGAAGCCATGGTTTGTGGG
CAACCCATTGGACAGGAGGGTGCTTGACAAGGTTGTGGGCACATCTGTGG
AGCAGCCATCATGGGAGGAGGCATCATCATAGCGGCACCTTGTGCACATC
CTGAGGGGCACGATGGTGGCATGCATGGTCTTGGACACATTGATGGTGCG
GAAGCCATGGTTTGTGGGCATCCCATTGGACAGGAGGGTGCTTGACAAGG
TTGAGGACACATTTGAGGAGCACCCATCATCGGTGCAGCTTGCAAACAGC
CATTTGGACAAGATGGAGGCATACAGGGCTGTGGGCACATTGAAGGCATG
GAAGCCATGGTCATGGGGCAACCCATCGGGCAACCTGGAGCTTGACAAGG
TTGTGGACACGTCTGCATCATTTTTTGAGGTGAAAAGTAAAGTCTTGGTG
TTTGTTGACACCCGATAGGACAAGAAGGTGGTTGGCAGGGTTGTGGACAC
ATAGATGGAGCAGCCATTGAAGTTGCTGGACATCCCATTGGACAAGCTGG
TGGTTGACAGGGTTGTGGACACATTGGTGGTGGAGCCATCATTTGAGTTT
GCATGCACCCAGAAGGACAAGCAGGTGGTTGACATGGTTGTGGGCACATT
GAAGGAGCTGAAGCCATTGTCTGTGGACATCCCATAGGGCAAGAGGCTCC
CTGGCATGGTTGAGGACATTGTTTTTGACATTGAGCTGGGCATGAGCTTG
GAGGACATGGTGTTGGGCAAGCCATAATGTTCACTGTCTGTTGTGTGGCG
ATGCATCCTGGTGGACATGGGTGAGGGCAAGGGTTGGGGCAGCCACCAAG
AGGAGGGGCAGATGCAGCTGAGGGTGGAGGATTAGCTGATGGTCCGTATA
CTGGAATGTCTAAAGTGATGGGGCATCCGGTTGGACAGTTGCTGGATGGA
CAGGGTCTTGGACACATGGCTGGTAAAGCAGACATGGTGAAGGGGCAACC
ACTTGGGCAGGCTGGAGGTTGGCAGGGCTGTGGGCACATTTGTTGTGGTC
GGGCAGCTCCCAAGCAAGAGGATGGGCATGATGGTGGTAGACATGGGTTA
GAGCAGATTGGTGTTGGTGGGATCACAGTGATACCAGTTGTTTGTGGGCA
ACCCATGGGACAACCAGAAGGTGGACACATTGATGGACAGAAAGGAGGTT
GCATAGGCATTGGCATGGGAGCCATCATCTGACTTTGTTGACATGGATAT
GGACATGGAGAGGGGCATTGGAAGGGACATGGTGGTTGACCCATAACTGG
ATCCCAGCTTTGTGCCAACATGTTGTAAATGAAAGGATCAACACCTTTTG
GAGGTTGCTGCTGTTGTCCTGATTGTTGTGAAGCAGGACGTTGGTAGGAG
TTCGATGATGAGGCTGAGGTAAGTGGGGAGCTTCTGGACATGGAGCCTAA
GCGATTCCGTTTTTCAGCGGTAGTGTTGGCATTGTCACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070487TCONS_00070487Clytia hemisphaericatranscript
TCONS_00070488TCONS_00070488Clytia hemisphaericatranscript
TCONS_00070489TCONS_00070489Clytia hemisphaericatranscript
TCONS_00070490TCONS_00070490Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_56supercontigscaffold_56:858684..863222 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.14	0.26	0.14	3.84	2.72	26.99	27.91	2.86	3.27	27.99	10.76	15.78	17.57	10.01	36.4	24.23	20.19	0.18	0.25	21.35	23.13	14.27	14.25	13.07	15.78	3.28	0.81	0.3	0.1