XLOC_043880 (gene) - C. hemisphaerica

Overview
NameXLOC_043880
Unique NameXLOC_043880
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_56:743812..747499+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043880 ID=XLOC_043880|Name=XLOC_043880|organism=Clytia hemisphaerica|type=gene|length=3688bp|location=Sequence derived from alignment at scaffold_56:743812..747499+ (Clytia hemisphaerica)
ACCAAatcagctgaaatttaaaaaagctcCGAAGAAAAGCATATAACAGG
GTAAGTTATTTCtatggagtttttgattttgaaatatcaaCCCTAATCAG
ACTGTGGCAATATATAAACACAGTATCTCTAAAAACAATCACTTGTAACG
TTTTTGATTCGCgttattttccaaatatttcaatCTGAACATACTGAGCG
CGTGAAATGGggcgtaatttatgaaaattactCAATTGTTGatcaaaaaa
gcccattcaacAATAACACAGTGACTTAATTGCATCCAACCCAGCAAAAT
AGTGAGTTCCCGAAAGGAAATCGTTTATCTCTCCTCAAGCTATTAGATTA
AGGAGAAACTAAAACCCacaaaattgagtttttttctGCAAAGACAAGAC
GTTTTGAAATCTACTTAAAGCTGTTATGTAAAAATCGAGAAATTTGGGTT
CAGGATGGATATACTCGGTAATGATAAGCTTCGAACAAAGGGTAATGTTT
TGatcagagacttttttgaaaaaagcccTGACTCATAGCTGAAAGcagta
ataatttttcaaatgacAATGTCAAAACACTTTTGGTTGACGACAAAAAC
TTACCGTGGTCTGATTTGTTGCGTTTTTGCTTTTCAGCATCTAAGAGTTT
CTTCTATGTTTCtaatataggaagtatattatagatagaggtctgcgatt
caaacTAGAGATGATCCAGATTTTTGTCAGGTAATAGTCGAGTTGTACTA
TGTGGCTCCACGTGCctattttgtgactttttctctcttcttgcGTTGAA
AATTCACATAAGAATCATACCTTTAAAGAATTAATTTTTGTAAGGTCATG
TCAAAATCGGGCAAATAtagtaaaaatttgatattttgcttGATTTTTAC
CAAAATCCCTCATTTGTTGCCTcgtagattgtcaacaaagacATCTCCAA
GCTAATAATATTTCATTGCATTTTCAGTGAGCACCATGCATCACTTCAAC
AACACAACGATGGCGTTCCCTGTATGGTCCGATGAATTGGATTCGCTTTC
CATCAGTGTGGCGGCAACCAACATCTTTGCTGGTTGTTTCAGTCTCATCG
GAAACACCCTGGTCATTGCGGTCATGTTGAAAAGATTCCGGACAGCATCC
ACCTTCAAGAAACTATTGGCGCATTTAGCATTTTGTGACATCATCTATGG
GATTTCTATATTACTGGATACACCTAACTGGCTTAAGAAGCATTGGGTGT
ATACGCCCATGTTCTGTAAAGTACTCCCTACCACCCAATTCGCTTCCAGT
TTGGCAGCAGAAGGAACAGTTGTTGTTATAGCAATAGAAAGATATCGTGG
AATCACACAACCATTGAAAGTACATTGGAACAATcgagatttttcatttt
ccttgatcATAGCTTGGCTCTTTGCTTTCGTCTCTGCTTCACCTTATTTC
AACGTCTTAAACACAGTAACCATACCATATATGGGCAACCATACTTTCTG
CATCGAAACTTGGAGCACAGGAGATCATATCGATCAAGAGAATTCCGCTT
TCATTTACTCTACCTATACATTTGTGGGCACCTTCATGTTACCGATGGTC
ATTTTAGCGGTATTGTACGGACGAATTATTTACATTATTCGCAAACCGAT
TGATCCTATCCCATGCTTTGAACAACTTTTCATAAAACGACGCGAAAAAG
ACATCAGAATCACCAAACTTCTGATTCTAGTCATTGTGGCGTTCGCCATT
TGCGTTTTACCCAACCAAATTGGACACTTTATAATGTCGAAGGCAACgct
ttcaaaatctgaaaaagaaattcttgcTTATGTTCTATTGATTCCATACC
CTTTCCAATGTGTTTTGAATCCTCTCATATATTCCATCGTAGacaagaaa
tttagaaaagACGCAAAACAAATCTTATCGTGTCAAGGGGATAAAGAGCG
AAAGATTTCTCGAACAATGACCTCTTATTTTATGGTTGAAAGTGCATCTC
ACAAGAAGACATCGCATAGTGGAGAGACATCTATTTGTTCGATGCCTTTG
AGGACATCTCGTGAAGAAAGTGAAAGCTTATTCTGACGAGCAAAGATCGT
CGTCAAGAATACCTTGATCAAATCGTCACCGCATAATCAGAATAAATAGA
CTGACCTCGGGTCACACACTGTAGAATCAATACaaccctgtctcgcagcc
cagTGGAACTTATTCCTGCAGcggaaatgaaattttctttcgaaatcCCA
ATTTTTCCAAGCTCAAGAGATCCCATGGGGATGATTTAGAGTGAAAAtgt
ttccattgaatttcaaatcaaattaaaGTCGATTACCCAGTGAactgtag
ggtatttttcccaccggggataAGATTTTGATCAGATTTTCAAATGGAGC
AGGGTCCCACTGGGTCTGCGATACAGGGTTGTATCAATAGTTGTTGTcat
aatttctttcaaaatttccagtGTAATGTtatacaaaagaaagaaaattt
atgaGTAGCAATTTCTGTTGTCTTCATTTGTCTttcctttcacaaaaaaa
ttcttcGTCCGAAGAAAAAACTAATAGGATGAATATTGAAAGGTTTTGCT
ATTTACATGTTCCataaaaaaggaaagattttttataataCTATTTGCGA
GCTTGTATGCTCTTGCCGAGTCCTACATTATTTAGGAGACTCTTACGAAT
ACCTGAAAATTatggtaaaatcgaaaaatcacaAAACTCGAGAACAGAGA
ATTGAAAATCTTATCAGGAACCAAAATACTCAGGCATACTCTTACATCTT
ACTTTCGTGtaaaagtcaacaaaatttcgaatttcgaaCTAAAAAAAGGG
GTTTGATCTTagtataaaacaaaaaaaatatatgcaTCAAATATCTATCT
AATAAGAANGATCTTagtataaaacaaaaaaatatatgcaTCAAATATCT
ATCTAATAAGAAAACGCGTTATATACAAGCAGCCTTGGCCGAACACGCCT
TGATAATAAAGCTCTGTAAAGACAAGGGGATTTCGAGAAACTACTGTCCa
ttcaattaaaaattgaattcgATTCAAATCCATCATTCAAAAAAGTAAtc
gaacaaaaatcaaaacaatttttttatatacataGTTGCGTAGCAACAAA
ACCACAGAAACAAGGCTGTTTATTTTTAGCCATCATAACTTATTTTAGTA
CCATTGTGAAAACAGAAATAAGATATTATATCATTTGTTGTagtgataaa
aaaatatctatCAAATAACACATCATCTATCATTCGAAATCTTCTACAAC
GACTCGCGCATGCGTatgagggggggggggactttatacatattttattt
acaaaaagggAGGTTTGGGGAGAAAAAACTTCACGGAACGCCACCATCTt
catcaaaaacttcaaacaaacaCAACTTTGTAACATTCTCAAATAACAAG
AGTTTATTGAACACGTATATTTCCAATGCATCAAATCACACCTTATTGCT
TAGCAGCTCCACGCATGTCAAACGTTTCAATATGTTGTTTGGTCTTGTAC
CGATTGATCCACTCGTCGATCATTTGGTTGACGAGGTGAGGTCTTGGTGT
GATCACTTGCTTGGCTGCAAGGATTCCACCATCCGTTATGCAACAATCGA
AATATTTCTGTAGTAACTTTTCTTCTTGGCCAACCTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070479TCONS_00070479Clytia hemisphaericatranscript
TCONS_00070480TCONS_00070480Clytia hemisphaericatranscript
TCONS_00070481TCONS_00070481Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070480-proteinTCONS_00070480-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_56supercontigscaffold_56:743812..747499 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0.06	0.02	0	0	0	0	0.01	0.1	0	0	0.04	0.03	0.02	0.02	0	0	0.03	0	0	0