XLOC_043878 (gene) - C. hemisphaerica

Overview
NameXLOC_043878
Unique NameXLOC_043878
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_56:720326..725825+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043878 ID=XLOC_043878|Name=XLOC_043878|organism=Clytia hemisphaerica|type=gene|length=5500bp|location=Sequence derived from alignment at scaffold_56:720326..725825+ (Clytia hemisphaerica)
GTCGCCTTCCTCTATGCTAATATTCTACCAATTGAAACTATCTACTTCAG GGTAACGTGTCGCTCGAAGTTTCTGATATATGTCAGGAAACGATCAACGA TGTACTTATTACAATTTCATTTCTAGATCATTCTACTTTCGTTTTAGAGT GActtatacaaagaaaaaatgaaagtatTAAAAACAATATTCAAAGGATC TATCTCAATTACAGCAGTGGTTTTAGGCATCAAATTACAACATGATCGGC TCTCCACCAATCACATTTTAACTGCTAAGGAGACGCCTAAGTACACATTG GAACATGTACAGTTAGTATTCAGACATGGTGCGCGTACACCAGTGTGCAC ATATGATTTACCTGGTGTTGAACCAGCCGTTTGGGAACCGGAAAAATTCC TTGGAGATTTACCACATACCAATGTTGAGTATACTTTAAAGCTAGTTTCA ACTGGAGAAGAAATTTCACTTGAATCTATTGACCCTTCAAGTTGGTCCAA AAGACGTTTGAAAGTAAGTTCTTTTCTCTTGGATTTATCTGTTTGGCCAG TATTCCATTGAATATAACAAAAGGAAGAGGTCTCACTCTAGTTCTAATGC GCCAGCGTAAGAATTGAGCCTTTTTGAGTCTAACGATCATTTTGACGGTA TACAATGACGAATTTTAAATTTCTAGAACTAAAATCACGTTCTCAAGTAA CTTTAATCTTTCTGAATCGAAGGGTGGAATGCAGACAGGCAAACTGACAA AGAATGGACAACAAATGGCTTTTGATGTTGGACAACACTTACAAAAAGAA TACATCCAGGAACGGAAATTCATCTCCTCTATATACAACCCTAATGAAAT AAGGTAACTTTACAACACTTAATCCTTGAAAGATAGTAATTTacctaaaa aattttcttttgaaaatcttgaagtctcaaatttccagaattaccatttt gcataaaaaatgaTCATTGATTCTTGGTTGGTTAAGaattacatttttct tttacttCTAGAGTTCGAACGTCATCTTTCCAAAGAACGGTTGGAACTGT AAAAAGCATGCTAGCTGGGTTATATGGCAAAGATCAAATTCGAGGTAAGA CTTTGTTTTAATTCGAACCAAAAAATTGATCAGCGGGAAGGGTGTTGTTT TTATGCCCAAAGTACTTCAGGTGCCTGGATAGCACACATTTCACAATTGG AATTGTTTATCGGTACACCGAGTTGCTGACGAATGGTGGATACCAACAGT CTAAGAAGTTGACGAAGGCTTACTCCGAGGAACGATCGCAGATACCTAAT CTCGAAGGGCAGCAGGGATTGTTTTCACTCTCGCGAAGGGTCCATGTTTC TGGCGCATAGGTGGCTATCGGTAGTAATAATGCTTTGTTAAGGTTAATTT TCTTTCATACCTTTCTTCATCTAGAGCCAATCGAGATGTGGACGGTACGC TCTCAAGAAGAATATCTTTATCCTAATTTCTACCAATGTCCAAACCTCAA TCGTCATTTCAAAGTGGCGAAGAAAGACTTCATCAACTTTCGACCAGATA TTAGGGAGATAACGATAGATATCAACAAGAAGCTTGGACTTGTGGAGAAG GAGCAAATGATCGATGTTTTTCATCTTCTTGATCTCATGCACACTCGAGA GGTGAGTGAAGATTAAACTTCTTTTTGCTGGTTAAAATTCTGAAATTCGA TCGTTAAAAGAGAGAGAGTTTTAGCACTTGGCTTTGAATCGTGGTTCAAA TCCCCGCTCCATCCAATGTACCGTTAAGCTCGTAGACAGCCGAGcaggct ggccgtggaccctgttaaaaaaattggaagACTAGATTATCGGAACTTCC ACTTAAAATATCTATCTACAAAAGACTTAATGAGAACTGTAACATGGTAG TATACAATACACCATGGACTTTAACAGCTTTTAACTAAACGAGGCTGGAC TTTTAAtatgttggtttgccgtcagccTACTGACTCCGACCTTTATTGCA ATTTCGACGAAGCgaatttcttttcttcaaaaaattacaaaatgtagaca aaaattccatgaatgaccaaataaaaagattttccgaccgaccgacccac ctccaaaatctaggctcgggtgacggcaaaccaagaactttttaagtcca gcctgaaTTATGCACCAGTAGAGAATCTTTGAGGTCATCGATGTAATAAG TAAgccataatttcaatttcatatcAGTAATCACTGCTTTTCGAAGCTTA GAGAAGCTTTTAGATGATATTTTTACTGGTCTATGTGGAGGATGAAAACA GCTGCCACTCTTAGTAATTATCTTTTCATTTTAGGCACATGGTTTCAAAG CACTTCCAGATAATTTAACACAGGAAGATCGTAAAAAAATCGAAAGAGCG GCTTCTAAACTCTTCTCTTTTATTATACAAGGGGATAACGACAGGTGAGT GTCTTGTGAGTAATCCCTTGGCAAGACCGGCGAAAACACTCCGCTCTCGA ATGCCTTAACCCTTTAAGACTTTGCGTCCCCGATGAGTGTCCCCAgggca aaaaagcaaaaaaagtcgATGTCGTCCAATTCTAATGAAATTACGGATAT AACACAATTAAATGGTGTAGAATTGAATggcaatattgttttttttgtat atttgGGTCTTACAGGGGGTAAAATTGGGGATTTTGGGCCCAATTCTGGG CTTTTGGGGcaaaaaatgacccaaaaatgaagtttctccAATTTCGATGA AACTTTCCACTTTATCCAATTTTTCATGTAGGATACGaaaatgaaactta aagttcttCAAAAGTCCTGAAATACCCTCAGAAAGGGGGTTTTGGGCCCG ATTCTGGGCTTTTGGGGcaaaaaatgacccaaaaatgaagtttctccAAT TTCGATGAAACTTTCCACTTTATCCAATTTTTCATGTAGAATACGaaaat gaaacttaaagttcttCAAAAGTCCTGAAATACCCTCAGAAAGGGGGTTT TGGGCCCGATTCTGGGCTTTTGGGGcaaaaaatgacccaaaaatTAAGTT TCTCCAATTTCGATGAAACTTTCCActtttatccaatttttcatGTAGAA CACGAATATGAAactcaaaattcttcaaaagtcctGAAATAATCTCAAAA AGGGGGTTTTGCACCGATTCTGGGCTTTTGGGGTAAAAAATGGGTTTATG GTCcaattttcctcttttcaggGTTTAAACAAGACCCAAAAGTCAAGCTT CTTTAATTTTAATGAAAcgtaaatttgcaaaaaattttattgaataattt aaaattacACTCAAAATTAACCCCAAACTTGCAcccgtaaaatgtttttt tgtctaAACATTAGGCTGTCagtaataaaaaatattaatcAGAGAGTCCA ATTTTTCTAATTCAACCTGCTGATGGGAATGTTGTAACGGGCAtcgaaag tttaaaaaaaaattataacttggaacttggaataaaaaaatcttggttgg aaatttgaaaaaatgagtcGTCTGGAAAAATTAAGGCGAAGATAAGTATA CGGAGTGGATTAAGTGTCTTAAGTTGAAAAACGGAAAAAATGACAGAACA CTTTTTTAGCGTTATCTACTGAAATTAGTACATTGAAAGCTGGTCATTCT GCTTCACGTTCAGTaatcttgtttttcttttcagaaacaTTTTGAGACTT TCAGTTGGTGCATTAATAGAAGATCTTTGTCAGAATATcgaagaaaaagt taaaaacccTAAGAAGTACGTATAATTCACAGTACAGTAGTTTTATCTTT GGTGAACAACAGACAAATTTTCGTTCATCCGCGCTAATCGCGATTTAATT CGGATTTAAGCTAATCGGCcgctaatccacttttgaacaaccgggcccag ACTAATATACTTAAGTTTGAAAAGGCCtcaaaaaattactaaaaatctGA ATATTAATTGTGCTTATCGTATGCCACAAAATTTGCCCGTCTTAAATTTA AAGTATTTTCATCCTTAGGGTACATAAAATGGAGTTCGTTAGTGCGCATG ACACGACTTTGCAAGGGTTGCTAATGGTTACAAATCAATGGAAGGACGAA TGGCCTTATTATGTATCATTGTTCAAAATTGAACTCTATAAAGATGAGGT ATGGTAATATACCATGATGTTATTTTGAAGTAAAATGTTTGATTTGACTC ACATTCCTAGTAGAAGATTATCGACTCTGTTTGCCAACATCTACAGAGAT TGCAAATTTCATTGCACACGTTTTACGTGTGATACAATGTGGTACTGAGT AAGAACGCTGACCTTTATATANGATATCTGCagagatttcaaatttcatt gcCGCACTATGCTACGTTTTACGTGTGATACACTGTGGTACTGAGTAAGA AcgctgacctttatataccctgaaCCAAGTTTCTCAACTCCGGCCaggca aaatctttgatcggtgtttttggtaccctaatggtagcgcTAGTAAATAG TGGTGTAAATGTATCGAGatcgctagatctacttttcctctaatactttt gatgatgtagcgccgtttgaggttaatttttaacactgcaatggcttctt caaaaaacttttatcaaagatggcggatgtaactttgtccagggtatata aaggtgtACTGAGTAAGAAGCATAAGGTGAAACTTCGTTAATATGTTTAT ActatttaacttttttatctTTCCAGGCGTCTGAACATTACGTTCGTCTT GAATTCAATGGACAAACTATTTTTCTTGACCAATCACAACATGAGGAAAT GGTGCCAATTAGAACGTGAGTTATTATATTTCtcttccaaaaaatcaaaa acgaaCGTATACACTTTCCtacttgttttcaatttttgcataTTGTTGCT TGCTTGAACTAAAGTGAAATTCAAGTAATTGAAGTGATCTTTCCCAATAT TTTCTTACAGATTTTTGGAAAAGATGGAGAAATTTCGCGTCAAAGATTAC AAGTTGGAATGTAGCAAGGAAGAAGGAAAGTAGCCCTTATTTTTTAGGct tcattttttaatgaaattttcaacattttatatGATATTAAATTATTCTA CTATATTGTAAATAAcgaattattttataaaaaaacattctgaAATCTTA GTTTTAAAAAAACTATCATCAAACTATAGGACCATCCATTGTGACTGAAA AcaactaaaatgtcgaaaatatACAGAAACGTTTTTATTGTATAATCCAA CTAAGTTCGACTAAGTCGANCATACTGAAAGCTTTAGTTTTAAAAAAACT ATCATCAAACTATAGGATCATCCATTGTGACTGAAAAcaactaaaatgtc gaaaacatACAGAAACGTTTTTATTTCATAATCCAACTAAGTTCGACCAA GTCGATATAATCGATATAACCCCCTGATTTCAGCTATATAAATCATTTTT TACATAAGTTACTGCATCAAAAGATAAATCCTTTAGAAGGTAACTCGTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070477TCONS_00070477Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070477-proteinTCONS_00070477-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_56supercontigscaffold_56:720326..725825 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ACP6lysophosphatidic acid phosphatase type 6 precursor Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.99 1.66 0.76 0.87 7.44 6.39 17.59 19.23 8.88 12.69 11.83 4.69 2.19 1.94 4.37 6.52 5.38 4.27 2.05 2.1 4.75 4.47 13.47 13.66 11.25 13.06 3.93 3.25 27.95 15.49