XLOC_043817 (gene) - C. hemisphaerica

Overview
NameXLOC_043817
Unique NameXLOC_043817
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_54:68838..79021-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043817 ID=XLOC_043817|Name=XLOC_043817|organism=Clytia hemisphaerica|type=gene|length=10184bp|location=Sequence derived from alignment at scaffold_54:68838..79021- (Clytia hemisphaerica)
GGAAGTCCAACCAAAATACAGAAATATGGCATCGTGCAGATTGCAGATTG
GACTCTGGTTGATGGTGGATGATGCTTGATGATGCTTGCTGATGCTTGAT
AAGAAGACGAAGGTTTAAAGGTTTAAGTGATTTCTTGGAGAAATTAGCAA
ATGTTTTTGAACCCAGAAAAGTCATTACATTTAGGGGTCACTCACAAATC
GATTTTAAGTTCAAATAACGTCATATGACGTTTGTGGGTGGGTGGGTCAA
GGTAGGATGACGCTTTGAATGGGTTATAAAAAACATCGATTTTGAGATAG
AGCTTTCATCTAATATATTATCTCTTTTCTATTTTGTATAATGAAAGAAT
AAAAAATATAAGTGAAATGATATAAAGTACAGAACAAACAGTCAAACCAT
AACCAGACAAACCAGACCCCTCAAAAGTTAAGTTTGTATAACGACGGCTC
GACTTTGATCGCTGCATTTTGTATTTTGTTGACTGTTGGACTTAAACGAA
GAGCACCTCGAAAATTATCAAATAAAAGGAAAGCTGCGGAAAAGAATACG
GAATTCTCGGAAAAGAATACGGAACTATTTCAAATAGTATTTGTCGGACA
AATAGTATTTGTCCGCCGAAACATTTTCATTTTTTGCACGCATCACACTC
CAGCTGGAAGCAACGAGTACTTTGGGCAAGCATCGAGCTTTATCAGTCTG
GGCAAGTCGGGTCTAGAAAANGAAAAGAATACGGAACTATTTGTCCGCCG
AAACATTTTCATTTTTTGCACGCATCACACTCCAGCTGGAAGCAACGAGT
ACTTTGGGCAAGCATCGAGCTTTATCAGTCTGGGCAAATCGGGTCTAGAA
ACCAGTGGTCAAAGCCGCGTTGGTTTTGTTGGTTGGTTGCAACACTCGAG
TCGAAAATATGGTGATGGCATTGAGCATGAGTTGTTGTTGGTTTTGACGT
TTTGGCTGAAGAAAAAGAATCAGAAGTACCAGATTTTTTTGAGTGACGTT
ATGTGGGGTGGGTGGGTGGTTTAGCTATCAAAACGTCATATGACGTTATT
TGAACTTAAAATCGATTTGTGAGTGACCCCTTAGCTATCTTCAGATTCAG
TTAGTCACACTAAGGAAATAATAGACCTTTTTTTAAACCAGGCGTCCGCG
CTCGATAGGATCGATCATCGGAACGGCTCGANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGATAGATTCAGCCATTAAAAAGTCTTGAGTATCGATCCT
TCGTTGATCCATTATCGAGCTAGTATTTCAATCGAGTATATCGATTCGTC
ATCGATCAGTTAGTCACACTAGGAAATCTAGCTTTCAGAAAAAACAACAT
CAGTCATCTAGAGTATATACCCTGCCCAGTTGGCGACCGAAATTTTTTGA
TTCAAATTTTTCACTTACTTTTTACTTTTTTGAAAATCCTTTTCAACCAA
CGGTTAGACAACTTTTAACATGCTCTTCGTGTTGTTTTGATTTTTTATTT
GAGGTGATCTTCTTAGAATAAAAAACTTTCGAAGCGAGCGGTACTAGTGC
CCAGTTCCCGACCGACGTACCGTGAGTGGTCCTAAATCCGACAGCCCTGC
CTAATTCCAATGGGGACTTTCAAAGATACAAACTAAAATAAAAACAAACC
TTTTGCTGTGATGCAACGAAGATACCAAAGTGTCAAATAAACTGAGAGAT
TTAATACATTGAACCCATTAAATAACACATTGAACCCATTAAATCAAATA
ACATTAGTTAACATTTTGAACACAAACAACGGATTAAGAATAAAAGGTAA
TTATTTTTACAATTCACACTTTTTTGATCATATTAATTGACATCTTGACA
TTTAAGTCATCATTGTTAGATGTTTTGTTCTTGAAATAGTTTATCGTTCA
ACTTGGAGAGGGAATGTTTGTAAACATATAATTTTTTTTCATAACCTTTA
TTTGGGGGTCGGAATTAGGCAGGGCTGTCGGATTTAGGACCACTCACGGT
ACCAGTCTGCGACCGATCGCGAGAAAGAAAAAATCGGTGCTCTACTTGCA
GGTAAGGTCGTATTAATTGATCAGGATGATAAAAAAACTCATAAGCTTTC
CCGTATTACATTTATTTACACTCGTTCTTTTGTTTTAAAATAGCTCACTT
ACATTTCCCGTCGGCATGTTTTTTCAGAATTTTTCTTCAAGTCGCCATTT
TTTTCTAAAGTTTGTTTTTGTTTTGTTTTGAAAGTGGCGGTCTATGGAGA
GTCTTCATTTGATAAAAACGCGGGAATTTTTTATGTCTGTTTTTTTCTCT
TCGCGTCTGGAATGTTTTAATCGCAATGTAGAGTCTTCTTTTTCATTTTT
TGAGTTTGGCCGGTCGCAGACTGGACGTCAAATTTCGAAGCTGATTGCAT
CAACTTTTTTATCAATATTTCAAACGAANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTGCTTGA
GAGTCAAGTAAACGATATAGCGCTTTCGCAGCATTAATCTTTGATACGCA
TTTTGGCGGGACGCTAGTGTGGCTAACTGTCGATCGTTAATCGATTTGAC
ATCGATTCGACATCGATTCGTCATCGATCGTTAATCGATTCGTCATCGAT
CGTTAATCGATTCGTCATCGATCGTTAATCGATTCGTCATCGATCGTTAA
TCGATTCGTCATCGATCGTTAATCGATTCGTCATCGATCGTTAATCGATT
CGTCATCGGTCGTTAATCGAGTATGCATCGATTATAAAACGATTATGCAT
CGAGCCTGTAAATTAATTAGCGGGTTGGGGACGCTTATTATATTAGGTAC
CCGAGAGTACCATATCGGCCATTTTTAAGCCGGCCCCCTCCGCTTTTTTA
AGTTCGGAGCTAGGGCTCAGGCGAAATTCCGTAATCTAAACCTTCCAGCA
GATGTTGAAAGTTTCCCAGACCTTTTCCCAGAGCTTTTTTAGCGTGTCAA
AAGAAAATTTCTACATCGGGTGCCAGATAAGTGCCGATAAATAAGTAAAT
CCGGTTTGACGCCATTAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNAGGTGTCGATAGGTAATCGATAGCGAG
AAAGATCGATTAATATTAGAGCTCGATTTTTAGAAAGAGTCGATAGGGTC
GATAAGATCGATGATAGATCGATAAAAGATCGATGATAGATCGATAAAAG
ATCGATGATAGATCGATGATAGATCGATAACTAATCATAAGCTTAAAAAA
ATCTTGAGTATCGATCCTCTATCGATCTCTTATCCGGATCGATAAGTAAT
CCATCAATCACATATCGATCCGTCATCGCGCCGTTCCGATGATCGATCCT
ATCGAGCGCGGACGCCTTTTTTAAAGAGGCAACCCTGTTGAATAATTATG
TAGTCCAGCATAAAAACAATGATACAGCCATGCATAATTACTGTTTCATG
CATATTATAATAATTATGCGCATGGCTATCTATATCATCGTTTTTTTTTG
CTGGACTACATAATTATTCAACAGGGTGGATGGCCTCATTAAAAAAAGGT
CTATTAATAGGGTGGCCACCCAGTTTTTCAGAGCATGTCATGGTTGCCCC
CAAGAAAGATTTCCAACATAAAACTCTGCCCCTAAGATCCGTTTCCCACC
ACAAAAAAACCCAGAAAAACAGGTAAATATACACCAGTCTGGAAATTGCG
GCTTGTGTTGTGCGCGCGCCGCCGGGATATCTCCGGCGTAGATTTGAGGT
TTGAGATCTGCTGCCTTCAACTTTTCCCAGTTAAGTTGGTGCAACTCCGG
CGTAATATTTCCTCCCTTTCCAGACTGGTAAATATAGCCAGTTTTCAATG
ATTTTGCCCCTGATCTGAACTGTAGATATTATCAAAATTTTGTCCCTGCC
CTTGAAAAGTGAGCAATCTCTGCCCTTGAGATCTCGATGATTTTTGCCAT
ACTCTGAAAACTGGGTGGCCACCATCAAAGGGTTGTGTCTCACACGGTAA
AAAATTTGCAATTTTAGTAAAATAAAGTTTGGGGTGAAATATCTTACTAG
AAAGTACAGTGAGTGGTCCTAATACCGACAGCCCTGCCTAAATCTGCCCC
CCCCCCCAAATAACTGCAATGAAAAAATTTTGTATTGTAATAAAAAATTA
TGTTTCGTATATATATAAAAAAGCAATTACCAGACGATCTCAATCAAACG
GAATCGACGATCGAACCAGTCAAACCAAATGCAATTGAATCTCAATCGAA
TATTACCGCAATTTTCAGATTTGATTGATATTCAATTGATATTCAATTGC
GTTCGATTGAGATTCGATTGCGTTCGATTGCGTTTGATTGCTCGGTGCTG
GCGGTTATGTCATGGTTCCCGTTCTTTTGTTTCGCTAACATTGAAGCGCT
TCTTCTTTTTGCACGGGAAAACATGTGGTTTTGAACTGTGACCTAAGGAT
TCGACCCAAAGCGAGCAAGGACGGATAAGAAAGGCAAGTGTTATCATGAG
GGCGGAAGGATTGCTGAATTAGGTCACGTGTCAAATCATATCCTTTCCAT
ACGGTTGAGAAAGTACCGTCAACTGCTCTAACTTGGGACGATTGCTCGAA
ACATGGGACTGTTCTGCATTTTCACTTACTGTAAAATCGAAAGAGAAATC
GCATATTTTTTAATTGACGATATGACAAAAGTGGTGGATTGTATGTTTTC
GGGACATCAGAGGGCGTCAAACACTCTTCTTTGATTTACGATGGAAAATC
GGCCTTCTTTAGAGCATAGAGCTATCAAACAGGCTAGCTCTAAAGCTCCA
AAATAGCATTTAACATGAAAACCAGAATATAATTCTTCAATGGGAATCAA
AACTATAAAGTGCACTTACATTACAAACATCAATATGTCAGATCTAACAA
AATTAATAACGTCATCATTGACAATAAAACAAACGATTTTCTGTCAAGAG
CCTTGTAAACATTCCAACAACTTTCATCAAAATGATCTATCACAGCTACT
TCTACCATTTTTAGAGGGGTCCGAGGATTGAGCCGAGAACGCTCGCAAAA
TGCTCGCAGAATGCCCACGAACTCCCACGCGGGTGAAAAACTTCAATCTG
TCAATCATTTTCTCAAGCGAAGAGTACGCAAAACGATTCTAGCTTTACGA
TAGTGCCGCGGATCATCAGTGGATAGTATTCAATTATCATTATCCCTTTA
TTTTCATTCCTAGAACTTTTGCAATAAAAAGGAAAGATAGAAAAGTTGTA
TTTTTTACTGCTCTATTCACATACTGAATTTGAAAGATCTTCTATGTGGC
GTTTTTTTGCAAACTTCAAAAAACTAATTTTGTCCCGCTTTTGCAGGACT
TTAGCGCACGTCAGTCAGGGAAATCCCTCAATTGTGGTAGTAATTTTTTA
CTGCAATTGCGGTATAAACGTCACCTTTATATTTTTCATATACCANAATG
AAGTTCAAGTTCCCAAGACAGTTAATTAAAACTTGAAAACTTAAAATGAG
ACAAAATGACCTATTGTGAACGTGCAGTAGCCAGAATATCAACCAACCAA
ATTTTGTCATTCAATTCCTGAGACAGCGCTTCGATTTTTAAGGTCTTGTT
TATACGCTACAGTAAAAGTAATTTCCCACATGTAAATGGGTCAGTGTTTG
AGGTCCGGCAAAATTTCTTCCCTGTAGATCTTTTTCTTGGGAAGTTGATC
TTCAAATTAGTTTTCAAGGTTGGCTTGGCTCAAATTTTTTCATCTATGGT
TCAAATTGTAGGCAATTTCTCATTGTTTTTGAAAANATATGTAGCCGTTA
TAAGCCTTTGTAGGCTAACCACAAACGAAAACTACCGCAATTGCAGTATA
CTGCAATTGAGGGAATTCCCTGACTGTACGTGCTTGTGTGCAGCATAGGC
TACAAAGTCCAAATATGTGTTTCCCCTAATTTTTGTATGAAGAGTTAGGT
CTATACTGTCAAACGTAGTCGAAAGATGATTAAACAGCAATCGAACGCAG
ATGAACGACAATCGAATGAAGTCGAACAACAATCGAACCAATAGACTATT
ACCCAGAATTTTGACGTTTGATTGAGATTCGATTGCGTTCAACAATCGAA
TTTCAATCAGTCGATTGCGTTCGAATTGGTTCAGTGTATAAAATCTCTCA
GTTTAGTTGACACTTCGGTATCTTCATTGCGTCCCAGCAAAAGGTTTGTT
TTTATTTTAGTTTGTATCTTTGATTGAAAGACGCCATCGGATTTAGGCAG
GGCTGTCNTTTCTTTGTTTCTAAAATATTAAAGAAAACACACTGTGCGGT
CTGCCATGTTTCGTTTCCACAAAAATGGCACCGAAAATTTTTCTAGGTAC
CCTTACATAAATAACAATTACGAGTGATGTCTTTCGTCTATCAGCATAAT
TTTTTCACATGCTTTTGCTACATGATTCCTGCTTTTCCCCAATCAACGCT
TTACTCGGGTTTTCCTCTGGATTTGGGTCAAAAGAGACAAAAAAGAGAGT
TTTGTTTTCAGATTTTCTTTGAAACTTTAAAGGTTATATTATAACTAAAC
GTGTGGATGTTTTCGAAAGCTAAATGCTTCTATTTTTCAAATGTGGAAAC
CGTTTTTCAATATCTTTTTCACTTCATTTGTAGTAAACAAAAGTTTGAAG
CTGGTTGACTGATTTTCAAAGCCGCGCAAGGTAAACCCCAATTTTTGGTT
TTCGCGCATGCACCCTACCTTGCCATGTGACTTNAATTTGATGTAATGAA
CACCGTATTATTATGAAAAAATACACCATTTCTCTTTCGCACCGAGTAGG
CTTTTAAATCGAAATATGAAAAAAAAATCTGCAGTGTAACACACGCGAAT
GGCTGGAATGAAGAAGACCAAATTAGTGGCAAAACGATGGAGCGCTTGCA
GGCGCTTGACCTCACTTGCACGGCGAGTTACACACTCATTATTTGTTAAT
CCCGTTGGGCGATAGGCGGTTATTAGGCAGCGGATGTTCTCTATTTCTCC
AATCGGCGTTCGGTCATTTTANAAGCCGCGCAAGGTAAACCCCAATTTTT
GGTTTTCGCGCATGCACCCTACCTTGCCATGTGACTTACTGATCTTCCTT
GACCTATTTGTCATTTGCCCATACTGTGTAAGAAATTCTAGAAGCAGCAT
GTGATAGATTGTAGCCTAATCTTACCCAGGGTTTACTAAAAAACCGCAAT
TGAAAAGATTAACTAGCTCATTAGCGACAGCCATTTGTTTCTATGTGGGT
CAAGAATTTTCCTGTGTCATAAACCAGCGCTAATTCGAAAAACATCATCT
TTGGAAAGAAAAGAGATATAGATGCAGTTTTTTTTATTTGTTTTCTGATA
ATTTCTGATTGAACTAAAAAAAGAACTAAAAGATTTGAATGATTTTAAAG
GTAAGTACTACTGCATTGAAGTTCATTTTGGTGAATTCTTCCTTGTTCCG
CGACAAAAATCCCGACAAGTGCGCACCCTACTACTTTAGGGCTAAAGTCA
GTTAGTCGCACTAGGAAATCAAGGTTTTAGAAATAACAACATCCGTCATC
TACAGGATGTATTTGAAACAACAAGGGTGAGAGTTACCTGAATCAAGTTG
AAGATCCCAAGACAATTAAGTAAAAATCGAAAGCTTGAAGCAAAACATAA
TGACCAATTTAACGTGAAGCATCCAGCTTACAAACCAACCAAAATTTGTT
ATTCAATTCCCGGGATAGTGCCCCAACTGCAAGGCCTTGATTACACTCTA
AACTAAAAATAATTCCACACATGTAAATGGGTCGGTGTATGAGTGCTAAA
CCTAAACATAACTAATTTTAAGACTGTGACTCTTAATAGTATGACTGGCC
AAAAACTTTCACATGAAAAGAACAGCAAAAGTTCAACAAGTTTAAACATT
TTCTGCTCGTTTTTCCACTTATATAATGTGTAAATCATTCTTCACTTTCT
AGAGTAAGAAAGGATCAAAATGAAGCAATTCTACTTTGAGGAAGTATGAT
CAAACGTATGGCTTCTGCTTTATGGTACGTACCCACTGAAAACAATATGT
ATGAAGATTATGAAGATGCTGTTGACTTAAATGTCAAAAATAATGAACCA
TTGGATAGTAACCCAACATGGAGAAGTTCAAGAAAAGCTTGGCTCAAAGT
ATCAAGTAGGTAATTTCTTTGCTTTTTGTCCCTGGCGAGACATGCCCCAG
GACATTACAATTACATTTTCAGCGTCACATTTTTCTTTTCTTTTTTCAGA
CAAAATAATATTTCTTTGTAAGATCTTATTTTTTTTTACCTAATCGAATT
TGAAAATTATGGTCTTGTTCAGTTGATATTTGATTACCTTCAACTATCGA
ATTTCAATAAATCAACCATCAAATTTCAATAAAATATCAATTCTGTTTGA
TTGAGATTGTTCAGACATCATCTCAATTTAATATTACTTTTTTCTGATAA
CTGATAAGAAACACTATTCCATAAGTTCTGTTACACTGTAACTCAATAAT
GTGCTAAATTGATCCATTCTAGTTTTGCAAGCCAAAGAGTTACCTGCAAT
GGACCCTGGGCCAAATGGGAAAGCTGACCCTTACTGTATCGTCAAATTTG
GTAATGAGGAGCATATCACTACAGTTCAGCAACGTACAACAGAACCTGTC
TGGAATGAAACATTCATATTTGAAGTGGATAATATCCCACAAACAGCATT
TCCCTTCTCAGCCAATGCGCGGAATTCAAATGGGAAGTTAAAGATNGGCC
CCCCCCCCCCTTTCTTAAGGGGGGGGGATGACACCTTCCAAAAAAGTGAA
GAAGGGGAGGTCAGAAATTTTCATTAAAAAGGGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070350TCONS_00070350Clytia hemisphaericatranscript
TCONS_00070349TCONS_00070349Clytia hemisphaericatranscript
TCONS_00070348TCONS_00070348Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070348-proteinTCONS_00070348-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_54supercontigscaffold_54:68838..79021 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.76	7.22	17.86	15.73	27.65	21.24	17.19	22.18	14.31	21.3	16.29	11.06	11.69	10.07	11.59	13.01	13.7	13.39	6.8	11.24	11.03	11.25	7.47	10.04	13.55	10.59	6.44	4.61	7.42	7.43