XLOC_043735 (gene) - C. hemisphaerica

Overview
NameXLOC_043735
Unique NameXLOC_043735
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_516:93740..103140-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043735 ID=XLOC_043735|Name=XLOC_043735|organism=Clytia hemisphaerica|type=gene|length=9401bp|location=Sequence derived from alignment at scaffold_516:93740..103140- (Clytia hemisphaerica)
ATTTTTCAGGGAAATGGTACTGATTATCCATGGTTTTCGATCACAAGTTT CAGCATTACAAGTAAGAACATTAAATTCTTTTAAGACAATATTTTTCGGA TTTGACTTTAAATAACTTTGCTGTATTTGCGCGAAAAGTTTCGATAGAAC TTGTTATCTAGGCCAGCAATATAACAATGTTGTAATCCGACTTCAATTTT GTTCTCTTGTTGTTACTCACAATGATCTCTTTATTTGTTTGTGAACAATG TTTAACATTTTTTTATTCAAAACATACATTTTCTTTCTTGTTAGAATTAA TCAGCATGCCAAATCGAATTAACCAACCACCACAAAAATTCTTGATTTAA AAAAATGAGATATTGTATCATACATAGTTGGGAAGTATCGCTTACGTCAT TCCTTATATTGACGTATTAAATTGAAATTTTTTTTAGTTCGAATGGGCAT GGCAAAACCCTCTGAAATCAAAGCGCTTAAATCATATGAAGAAACTGAGA GGGGAAAAGAAATTTGATTTGAAATTGAGAGCATTAAGTGAAATGTTGAA CACCGGACCTTGGAATCGTTTACCCCTCACCATCCAATGGTTGAAACAAG AATATCAACAGAATTTCCCTGTCAATAAACCACCACCTATTCACATGCCC ATTGCTTATGGACCCCTACGTTTTGCAAAAGAAACCTCACAAAATACACA TGAAAACGTGCAAAAAGAGACATCAAAACTTTGTTATTTTTGTAATAACG AGAAAGAAGGAACTAAGGTAAATTGAATATCTTTCTGAATTTTGTAGTGA GAAAAAATGAACAAGCTTAGTTTTTTTTTGCAAAAGCATTGACTGGCGTC ATTCTGTCTACAAGAGGATAATAGCCATATTAAAATTCTACCCCAAATCT CGAACAGAACTTCATAGATTATACAAACTGAATAAACATTACTATACAAG AAAAAAAGTTGTGAACTTCTTGTATGGGCTGAATATTTTGTTGCCCTCAA ATAAATATAGATAATATATACCTTGAGCAAAACTTACTGTAAATTTGAAA AACGATTCAAAACTGATAATTAAATGAATTTTCCTTTTAGGAAGAGAAGT ATCTTTCTTGTATCGTCAAAAGTTGTGAATATGTTGGCCATATCACGTGC TACGCTCAACACTTCCTGACAACTGATAAATCAGATGATACATGTCCTAA TCTTCTACCTGTTTCTGGTGTATGTCCTGGATGTAAACAAGAGATATTAT GGGGTGATTTAGTACGTCAGAGGCAGTACACTCTGGAGGAAGCTGACGAG GGTAGTGGAGATGGCAGTGAAACTGAAGATGGTATGTTTTCAGCACCACC AAGCCAAGATGATGACTCCGAAAATGAGTTTGATCAATTTCAATAAATGT GAGTTGATTTTACTTTTCATTTCTTTCAGTTTTTGCTTTTTTGGACAATG CCAATGTTTTATCATAGTGTCAGCCTTGGTTTAGGTCCCAGGCAAAAATG TTTGTTTTTTTGGTAGCCTCCATGACTTTCGACCCTTCGACACTGGAGTA ATTCAAATGTAGATTGCGTTGCAGTTCCAAGCTACAGACAAAATATTTCG CAAGTTTTATATAAAAAATTGCACAGGACAGGAGGGGCGCAAAATTTGTG CAGGAGAGCAGATTTTTATGACATGTAATTTTCTATATATACCATGAATA GATAATTACAGTGTCATAAAAATCTGCTCTCCTACACAAATTTTGCGCCC CTCTTGGCTACGCTCTGCAAACATCACGATGAAGCATTCAGTCCCTATAC TTAGCGATGAGATTTTAGCTATCCCAAGTACATTAGGTTCCCCCCAAAAA AGGTGGATGACTTTCCGCCTCCTCTTTATTTTGGAATATTTTATAGTGTA ACCCCGGATCAAAAGATTCTTAAGAATTACACAAAAAGTCTGGAGTAAAA ATAATCTTTGTTGCATTGGCCATCATTGGTGAAAATTCATGAAGTTTTGT CGACTAGTTGAGATATTTATACCAGATTCTTAAAGGAGACCAAACAATAG TATCTCTTTTGGCTCTTGTTTTATTCTAGAGCGTGGCATTGGTCTTACAG GAGACCAAAGTTTAAGTGACTCCTAGTTTCATTTCTGCATCCAAATACAC TTCTTTTTATGTATAATTCATTATGCTACCAGATAATATTGGGTGAATAA TTACTTAAAATTTGTGTGTATAATGAATTTACTAGAGAAAGGGTCTCAAA TATGTATTGGGAGGCCTAAATTTTCTGCTTACATCTCGTGAAAAATAAGC TATCAATAATATTATGCATGATATTTCAATGTAAATCAAAGATAAAAGAA ATTTATGCCCTAAATAATGAAACGAAAAATCAATAGGTATTCTATTATTA ATGTCTATCTTTCTTGGAAAAGGTGACAGTAACTACAAAAGCCTTCGTTT TTCTCTTGTTATTTACATTAAGTTAGTGTCTCTTGATGCTCACTGATAAA CATATTTCATTCAGATACCAAACACCTTCGAAATTTCTCATACCATAATG GAGAGAATAAATTCTTTAAAACTTTAGCAGCTTGCAATGTATGGTTGATA AAGTCGATATTTGGAACGTCGTAAATATAAACAACAGCTCGTATTCCATT GATAAACAAATGAAGGGACAAACAAAACCATGAAACTGAATCCAATCGTT TCAAAATGTACATCGAACGTTTTTAAGGATTCATTCGAAAATGAAAATAT GCCAACGAAACAAAGACGGAGGCCATGTATAAAATACGATAGATTGGGTT TGTCAGAAATACTGCAACACCGGAAACAATTAATCGTTCAAAAAGTCGCC ATGATTCCCACCAAAAGAACTGCTCTTTGTAGGGTTCCTCAAATATTTCT GAAAGTCTCTGGTCATTAAAATCATTCCTGTTAGATTCAGCTCCAATCCA CTTTGAATAAAAAGTTTTCCAAATGCTCAATAAAGGGAAAGTCCAAAACA TTAGATATGTAGTCATTGAAATATTTTTGTTTTTAAATAAATGGTAACCT ATAACGACTGCAAACGGGAACGGAACAACCCAACATATCAAGAATAAAAT CAAGAATAAAATATTCACAATTTGCCATGATGTAAAGCATTCAACAGTAC CATCGATTTACAGATCCGTTCATCGTTTTACAGTTCAGTAACCTAAAGAC TGTTCTACAAATATTTTTGTATCAAAATGCAATGCTAATACAAGAAGCCC GTTGGGCGTGAAGGCCCAGCAAAAGTGAAATTTTCGCGATTTTCGCGAAT TTCGGAATTTCCAAAAATTCCGAAAAAGACACGGGAAAACTTTAATTGAT CACATTAGTAGTAATATCTCAACCAAAATCATCCATACTGATGTAATTCA CACTGACGAAGTAAGTGATCATGATATGCCATACGTTATTGTTAACATAA AAAAAGAACGCTTTCAACCGAGATATAAATACATTCGAGACGAAAAGAAT TTTGACATCAATTCTTTCACATCCGACTTTCAACAACTTCCGTTATCCCT TGTATTTAGCTTCGACGACCCCAATGATCAGATATCGATTCTCAATAAAC TTGTATATGACTGTATCGAATCACACGCTCCATTGAAAAGAGTACGGATA ACCAGGCCGATTGCACCGTGGATGAAAGATCCAAAAATTATTCAAGAACG TCAATTACTCGAAGATGCACGTGCGAACNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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GTTATCCAATTCCATCTCATGTCTATCTAGTGGTCTAGTTTTAATAAAAT TTTATTCAGAAAATTTGTAAAAATATTTATATTTATTAATACTATTTATT CTTTAGTGCTTTTTATTTTGATATTTATGTTTAGGGGGAAGANNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCCTA AAAATGTTTAACAAGATTTCAAATTTCCCCCAGGAAAGGGATGGCCAAAG GATTTTAAATTTTACTGCGTCGAGCAAAACAAAATGAAAAACAAGCCGAC AATTATAATTCTCCCTTTCTTCATTTCTTAGAACAGGGAAAAGAAAAAAT AAACGAAACATAATGTAGTCAATCAAAAATGAATTGAATGTTGAAAGCTC GAAACTTTCTGCCCGAAGGTAAACAATCAAATTCAAAATATCATTAAATT CAGCTTCCATAACAAACAACATCAAAAAATGGTGCCACAGCGATTTATTG AGCTTCTTCGTTGTATTGAGCTTGTTCGTTGTATTGTCTTTGTTCATCTT CTCCCTCTTTCCTCCAACAAGGTCAATTCGACTTGAAAACAATTATGTGA GTCGAGTTTGAATAATCCAAGCCATCGACCGTTAAACGACAGCTCCAGAA ATGACCATTTCATTTAATGTGTAGCATCACGAAAAAAGTTCCAATCTTGT TCAAATTTACACATGAGCTGCATTTTAGTCTCCATTTACTAAAATTAGTA TTTGAAATAATTCTGTGTCGAGTTTGTAAAGTCAAGCCACCAATTCGTTA AACGAGACAGATCCAGAAACAACAAAATCGGGTGTTTGAGAGGGCCCCTC CCCCCCCCTTAGAGTCCGCAAAGCCTTGAAATGTTCTTTTAACTTGTTCT TAATATTTTGGCCATCAAAACCTTATGTTCTTTTATAGTTTGTTCTTATA AAAAACGTGTATTAAATGTAACAGAAAATTCCATAATTTGTTGGATACAG TGTGTCCCAAAAAGACGGACAAATCTTTACATAAAGTGAATTCCTCAAAA CATACCGGGTGCGCCACAAAAAAGTTTCTCTCCTTAAAACTAACTTTCTA GAAATCCAAAAATTTTGAAAGAACCATTCCTATTTCATTGGAAAGAAGAA AGATAAACTTAAATTTGGATGGGTCATTTATTAAATTCGTTTCATTAGAT CAAAAGTTATGCTTAGTTGAATAAAAAAGTTACTTTCAGAAAGTGCTCGA AAACGTTGAAAATCGACCTATCAAATTTTTATATTAAAATTGTCAAGCGC AATAGCCTTTACATGATTAAAAGTATTTAAATAAATTTCGAAACTGAAAG CCCGAAAGGGTTTAAAATCTTCATCAAAATCACTTTAATTTACTTTTACC GAAATTTTCCTCCGATTTTTGGTTTTAAATTGGATAAAGCCTATGTAAGG CTGGATTTATCTCGAAACCCATATTTGATATAGATAATGATGTATCATGT AATTATGCTTCTGTTTAATTTGATAGGTCGATTTTTAACGTTTTTGAGCA CTTTCAGAAAGTAACTTTTTTATTTAATTGAGCATAACTTTTGATGTAAT GGATCGAATTTAATAAATGACCCATTAAAATTTAAGTTTATCTTTCTTCT TTCCAATGAAATAGGAACGGTTTTTAAAAAAATTTTATATTTCGAGAAAA TTAGTTTCAAAGAGAGAAACTTTTTTGTGGCGCAACCGGTAGAAAATTCC AATAAGAGTTATAAAATTCACAAAATCTTCCAATTTTTCCTCCTTTTATT AAGCCCCACTAAGGGTAATAGGGTCGAAAGTCGGGCGGTACATATCCGTC CGCTCGCAACGCTAGTACCACCCCCCCCCGGATTTGTCCGTTTTTTTCGG TACACGCTGTAGTTGAGACAGAACTTTTGTATGGTATATGGCAAATAATG GAAATTCACTCTTAGGTTAAAGACCTTTAAAGAAACTAATTGGAATTCAG TTGGTAGGTAAATCAGAAAAATAACTTTATCCTAGTATAAAAAACTTGTT CTGATTTCTCTTAACAACAACTGGAGAATTCACTCTAATTAAAAGGTCTC AAATTAGTTTCAAGGCCTAAAACTATAAACGGGCTAAAAAAATGAATGAT TCTGAAGATTATAAGATTTGTATTAATTATTTAGAAGCAGTTTTTGAAAA GATAAATTGATGTACAACGCAGACATGTCTAGACAGGGAAAACGTGATGT ACTCTGAAAGATTAACAAATTAAAGGTTTAAAAAAGTTAAAAGAAATATT AAGTTACTGAAATCTCTTCTAAAGAGAAATTCACAGCGTGGCTAAATTGA TTAAAAGTCGACCAAAAGATGAAAATTTTCTAACTTACCTAACTTTCTAA ATTACCAAAAGTCGACCCTGTCAGATGCACATCTTGAAAATTAGTGAATT TTGGACCTATAGTCAGATATCTTCAGAGGCTAAAAAAGGGACCCTGACCC TGTTTTGCATAGGTGTCCCCCCCCGGTATTTAACCAAATATTTTCAATTT TCACTTTATTAAGTTACTGAAACTAACTTTTAACTTCGCTAATTTCGAAT ATGAATTTAGAATTATCCTATATTTTTTTTCGGGCAAAAAAATATAGCAA AAAGGTCAAAAGCTACTAATTGCTTAACAATGACGGGGGTTTAGACTAAA CATATGTTCAATATCTAACCTATTTTGCCACTTTTTTTGTTACCAGCGGA AAACACCCCTGTCTCCAGTGACCTGGAGACATCTTTTAAGACAGCGGGAA ATGTAAAATGTAAAATACCAATAGTAAAGTCTGAGTTGCTGGTCGTATAC TTCATCACTCCCCAAACTTGTCCCAGTCTCCTAGTTCAAGTTTGCTTCTA ATGTTTCTAATAGCACTCTAGGTTTTCGTGATACTATTCGTGTTCACGAT TGGCCCCATCAGTAAAATCAAAAAGTAGTGTTAGTAGGGCTAGGTACGCG ATTAATCACTTTCACCACGATTTTTCTCCACAGCCGTAAACGACTTTAAT ATCCGCACCACATATTTCTTTTTTGCAATGATATTATGGAATTGGTATTT GTTTTTAATCGTTGGAGATTCAAATGATTTCTTTTTCATCTAAAATCAAT GAATCTTCCAGAATACTGTTATTGTGATAGTTCGATGGAGATGGTCTTGA TAATAATAGTTTGTACATAAAACGTTTCTTTTTTTTCTCGCTTAAATTCT GTTACAGTCTTTATAAAAGTTTCCTCTCTCTAAAAAGTTATATTTTGATA T
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070230TCONS_00070230Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070230-proteinTCONS_00070230-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_516supercontigscaffold_516:93740..103140 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SLX1Bstructure-specific endonuclease subunit SLX1 isoform 1 Homo Sapiens
SLX1Astructure-specific endonuclease subunit SLX1 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.58 9.64 7.29 6.14 1.18 0.9 2.45 2.59 2.47 2 1.12 1.09 1 0.6 1.11 1.27 1.47 1.18 0.47 0.46 1.23 1.32 6.12 5.68 1.69 2.06 0.75 0.62 2.46 2.95