XLOC_043724 (gene) - C. hemisphaerica

Overview
NameXLOC_043724
Unique NameXLOC_043724
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_516:108022..111162+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043724 ID=XLOC_043724|Name=XLOC_043724|organism=Clytia hemisphaerica|type=gene|length=3141bp|location=Sequence derived from alignment at scaffold_516:108022..111162+ (Clytia hemisphaerica)
AACGTGGAGTCGATATAAATGCTAAATCCtttgtaaaatggtaaaatata CTTTAGTTCGGATTTTAAAATGTATTGATGATTATCTTCTCAAATTGATT TGGTTTATTAGTGTATTCATAGTAGTATAAAATAAGATAACTGTCTGTTG AGGTAAACTTATAtgtttgattttacttgctTTGTTGTTGTGCgtgaaaa gaaaaatggaatGTCATTATTTTCCCACGATGTATCTAATGTAATTTATA TTTCATTTtagtgacaaaaatattgacttaTAGCATCATTACAACTTGCt atataatttaaaaataatgatgaagatcaattattttgaaatatcacGAA TCCCTACAGTTGAcgcaaaaaaagttttagcAACCATTGAAGATGATGAA CGAAATCCTAACCGTAAAAGAAGGAGACTTGACAACCTGAATGTAGAAGA AAGAATACTCAGGAGGTAATTTCTTTACACTTCAGTTGGTTGTATCTTTC ATTGAGAACGGTCTGCTTAACCAATCTTCCAGGATGGTAAGGAAAACTAG TGAGATAAAAATTACAATATCTTTGTTTTTGGAGAAACANTGGATGGTAA GAAAAACTAGTGAgataaaaattacaatataaTATCTTTGTTTTTGGAGA AACAAGTTATTTGAAAATGGTTTATTTTTAGAGAATTTGTGTAATGCCGA CATACCTGGTCTGCAAAGTAGGTAGAGTGATTTATTTAACCTTACTTTTT ACCTTTACTTTATATTTCAATTTCAGGAAATTGAAAAACAGAGTTGCTGC CCAAAGTGCACGAGACCGAAAGAAAGCACACATGGACCAACTTGAAATTA CACTTATGCGAGTTGAAAAAGaggtttgattttgaagaccttaaaagtta tttttccaGAAAACTTATTTTATTCATATTATGCATTAATCTAGGTACtg acaatttcaaaaatttactttttaaatGGTTCTTTTTAACATTATTTTAC TTACTTGTGCAATTTCAGTCTAATCATATTTTTCCTTGTTTCTAATTATT AGaacaaatttttgaagaaaagcaATGAGGAATTAAGATCACAAGTTCAT CAATTAATGGAAAATAATGCACAGCTCAGATCAAAGCTTGGCTTAACCCC ACCTGCTTCACCATCTCAAGATTATACCTGTGTTATTGTCcccaaacaaa aagaaaatatcattaCACCTTCAGTGTGTGACCATGACCACATTGtgatc aaaaaagaagaaatgtcACCGGAGCATGCATTGCTTTTTGGGCTTTCCCT GCTGTGGAATATCCTGATGACGACTCTTGTTTTGATGATCACGGCGTGCA AgatgagtcccaggtagggtttTTGGATAAAGGTTTTATACTTAAGGGGG TTAATTTTTAATTCTTCgtgtgatttttgaaatatgcagTGTCACTTTAA TTGACTGATGCTTTTAAGCTTTTTTGAGCACTGGTACCAGAATTGTGTTG AAAGTGAGCAATAAACCTTTtgtttgaattgttttgttttctcaaCTGAT CATAATGTTCAATATGTGCAGCTGTCTCAATATCTCCTTTCATCAGATTG AAATTAGAGTAGAATTGAATTTCATTGAACAGCTGCCCTTACttctaaaa taaaagtaaataaaaagttcaattttaaaaagcttttccCTCTTTTTATT TGCATGTGTTTGCAAATTtcctttaaatttaaaaatcaNATTTAAAAAGC AAagattaaagaaattttttactTGCTTTTCCCTCTTTTTATTTGCATGT GTTTGTAAATTtcctttaaatttaaaaatcaacAATTGATTGAACTAGTT CTCTATAGAATTTTCTAGGGTGAAATCCCCTTTGTAAGCACCATGTTTaa tctgtttttcattttccccagGCTGAATTATTTCTCGATATTGTTGGTGA TAACGAACCAGTCAAGATGGAAGAATCCAAAATCAGTGAGGCCTCAAATC CCACCAGATATACAATTATCGAAAACAAGCCAATTAGCCATTGTCCAACA ATTAGAGGANATCAGTGAGGCCCCAAATCCCACCAGATATACAATTATCG AAAACAAGCCAATTAGCCATTGTCCAACAATTAGAGGACAAAACGATAAC AACAACGAAATCAAATGTGAAGAATTCGATGTTGATGAGTTTTTGTCAAA TGAGACTAATGACTTTGCTTGCCCGTCAAGCCCTGACTCTGAGCCAGTAT CACCATCTGATTCAACAATCGTTGAGATCGATAGTAGTTTCCAGATGCAC AACGCCACGGCTGAAAGTAGCGTGGTGGGCAAACCAGCCGATGATGGATA CGGGATGATACAAGGTGGCTCTTTTATTGATGATGAGTTTTTGTTGTCCT CGTGCGCCACCAATGATGAGTTAAATGATGAATGCAATATTACTGATGTA GATGATCCTTTTTCTGAGTTATTTCCAACGTTGCTGAGTGTTTGAGTTAT TGTCTGACCTCGATAGTGTTTAGTTCTTATTGCAGTTTTCTTGATCTTCC TGGGACTAAATTCTATTGATTCATTTTGTATGTATCATAGTGAATTAATT TTATCTTAGCTTTACATATtaaatttatttgaatttgaaatccatccatt tattttttatatccgAAAAGTCTGTTATTTATGAACAGcaagttttagat ttttatcTCTTTCCTCTTTTCTCTGACTggcgtttttatttttaatttat aagttttttttactattttggaaatattttcctACCTTGTGTTGCTTAAA AATCTCATGAAACAACGTCAGAATTATTATCATTTATTAGGAGTAATATT attattttgtatatatttaaCTTCATTGAAACAAAAGGGcataaatacaa caaaaaaatgttcaaaactgaaaaaaacccACTCTCCATCTCTTTTGCTG TTAGTCAACAATTCATCTTGATTAATTCCATGAGGGATGTAAAGTGATTC ATTGAGTAAGACCCCCTACGTACATTAGATTTAAACTTGGGATGAATAGA ACTTTTAATACTCTGATGGAAAAGATTCTATAGGACAACTGGTTTAAATG ATTATATgaaaaaagtaataagaaaTGCACATCTCCCTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070200TCONS_00070200Clytia hemisphaericatranscript
TCONS_00070201TCONS_00070201Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070201-proteinTCONS_00070201-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_516supercontigscaffold_516:108022..111162 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
14.63 12.95 7.13 5.66 205.24 158.84 226.71 238.2 130.07 133.88 115.77 152.79 199.07 227.29 157.55 194.63 87.11 110.57 150.53 132.33 86.18 94.04 68.77 87.25 84.03 81.36 89.71 87.55 70.79 59.06