XLOC_043518 (gene) - C. hemisphaerica

Overview
NameXLOC_043518
Unique NameXLOC_043518
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_511:87463..98614+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043518 ID=XLOC_043518|Name=XLOC_043518|organism=Clytia hemisphaerica|type=gene|length=11152bp|location=Sequence derived from alignment at scaffold_511:87463..98614+ (Clytia hemisphaerica)
NtccaaaaagtttgttttctttgaGTAAACAAAAGACATTGTATTAGTGG TCATGCAATTATCACAAGCATTTTGTAATAGCTATCAATTTTCAAATGTC CGGCATGGTGAAATCAAAGAATGTTCTTGTAAACCTAGCAACACCTGAAG AACAAGCTGCCAGAGAAAGGGAGGAGGAGGAAAAACTTGTAAACAATCAA ATCTCAGAGGAAGAGCCCATGTCTTCACCCTATCGCCAGAATTCTAGGAA TTCTAGTTCAAACAATCACTATGCAGTTTATCCAAGTAACTCTGAGCAGA GTCCTCTGCTTTCTAAATGTACAGATAGTGACTCTGATTCACCATTTGTG AACAATATTGAAAATGATCCAGATTTTAGCAAGGTTATACGATCCACTGA AGAAGCTATTTATATGGGAATATTACCTGAACGTATTTATCAAGGAAGTA GTGGAAGCTATTTTGTTAAAGACAAATCAAAGGTACAATTATAAAAGTAT ATGTTAATTTTGCATGTATCAtgccaggcgtagttaatcgatataatcga taatcttgagtaatcgataaataatcgataagtaatcaatggattagata tcgattagctaaccgatagaatcgataggtaatcgatactcaagattttt tcaaagctcgattatttatcgatcaattttgtcatcgattgcTTATCGAT TATAATtaagtatcgattaaaaattgatcggctatcgatcacagcttttg attgatcgattcgtgatcgattatttatcagattttagggagtggtactt taatagacctttacgcctttccatccgccatattgatagcaactccagaa gatttttcaagttttaatttttttttcaaaatctatcctatcttgtagag cttatgaaaaagaaagaaaatgaggggtcataggcctccagaggataagt ggttgtaaagatattcaaattttagtgtcaaaattttgactaaaaaNctt tcctccgtttccagacacatttgctCATCGATAgtagcaatttttttttc tcccgtcggcaaacaattttaaaaatgttgcaaaacgttcggcattttac caatttgtcgtctagcccgtgtcctcAGTGTTAtatttagcatacataga agaaaagttagaagggttcaaagttcacggaaaaatgaaacatttggttt gacgtcaacgatagttgcgtgacttctggagtcgctaatattgaattgta tgcaaaaattatggtggccgaattgccgtggtgaaattcccttatatata aagtatgcaaaacatatgcaaaaagaaagtattaattaaaaacttacatg cataattggcattatattaaagtgtaatcttgtagaagaaagattaaatN Nagctgacggcaaattattctcctgggaatagagctgccaaatgatcaaa tcaaaacattgataaaatgCGACGTCATAaatactgctttcagtttgcgt gttttgaaagtttgatgtgtgtactccgtcttcatggatttttttaatgg catgaaaacagaatatgcaatgtctttaagaacaaattcctaaaaggctt aaTTGTTGTTCTgcaaatatttccttttggattaagaaattccatctttt attgttctaatgatcataatatttatttataagatgctttgttgtctttt taatctttgtgtaaacttgcatatgttttgcatacattccaactaaatcc aaccatggcattttcgttcctctatttttgcatacaattcaagatggcgg acggaaaggcaaaaaggtctattggattAACTTTTgccttcgcgagatta aatttctcgatttctccaattttcaccattttcgcaaaattaaaagcaac atttttcgctgatctcgattgattttgaattgaatccaatcccctggtag catacggcctagaaaagctactacactcattttttttataagcatacagt aAATTTCGGTTGAAGTATTCTCAAACTCTCTGAaaggctgaacaaaaaaa agtttaaaaaaaacaaagttaccgttttatttagagaaggggcgttattg aatggtttgcctttttggaggagcattatttattcaaaagcgcgcgttta ttcaaagtaatacgaccggtatgagatttggcgaattccagaaattttct ttacttcattaaataccttattttggccctttttacgctggACCTTATTA Gcattatttttgggctcgttggtggaataagggccggcgtaaaaagggct ggTAATGTAATCAATAGTTGGTCACGATCTATATATAATTGATAACGATA CGTGATCAAAGATAAGTAAATGATTGATAAGTAACCAATGCAtgaacgat aagtaatcgatgattgttaacaatcgatacatgattgataagtaatcgat aggttgtatgtgatcgataagtaatcgatagcttggaaataatcgatcgc tgatcgatactcaagattttttgaaggtctgattacctatcgattctatc ggttaatcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtatcgattctat cggttaatcgatatctaatccatcgattacttatcaattatttatcgatt actcaagattatcgattatatcgattaactacgcctggatCATGAagtta tttaattatttttctttgaacaCCACAAAACATAGAGGGGAGGGATGCGT TGTAAGATTTTTTaggcttatgcaaataaatggatAGGGCCAGGCCCAAT TAATAGTTTCGTTTGTTTCCGACCGActctaaatttttgagaaaaagtgt tttaCTTCGAGTCAagtcggaaaaatcaaaaaatctttaccTCCTTTTCA CATGATAAGCTACTATCTCTGcagttcttttttaattgactgctttgatt tttctataaccagacgatctcaatcgaacggaatcaacgatcgaaccagt cggaccaaattgaacgcaatcgactaATTGAAATTCGAcgtcgaacgcga tcgaatctcaatcaaatattgctgcaattttcagattcgatttatattcg attgcattcgattaggatccgacccttagagagactaatctTTGTTAAAA AGCTGACccttttcgaaatcctctcgttgattcgattcttttgagctata tatgagagTTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNAGCTATATATGAGAGTTaaggaataatggga agcggtgcgcgtcacgcaaaatatatttgggacatgccttgtttcacccg aacAATCGAATGCAGTCGAacgacaatcgaaccagtcgaagaacaatcaa accaatcgaatattacccagaattttgacgttcgattgagattcgattgc gttcgacaatcgaatttcaatcggtcgattgcgttcgatttggttcgact ggttcgattgtcgattccgttcgattgagattcgattgcgttcgacaatc gaatttcaatcggtcgattgcgttcgatttggttcgactggttcgattgt cgattccgttcgattgagattgagAAAGTCAACTgcgtttttaagaaaat ttacattaaaagaGGGcccaaaatgagaaaatttaatCAATGACAACCTC GAAAATGAATTTGCTGAATAATttcacaagaaaaagatctGCAAGTGAGA ATGGGCAATCTAGATCTGTGCATTGCTGTATAGGCTATTCCCTGGAATTT TAGCTGAATGACAGGAGTCACCTTTAACCTGTGTTTTAGTAATTTTCAGT CTTCCTAGATCTTGTTTTACAATTTGTGCATTCTGTTAGAAATTGAGAGA CAATTTTACCAGTTAAACTTGGGACCCCTCAAACCTCCTAAAAGGAAGGA AAACATTTCCATAAGGTCCAATGTCTGCTACTTTCTACCACTACCCCTTC TTGGAGAAATAAACAAGATCACTGATTAATGAATATTAATTTATTTACCT TAAGGAAACCTATATTGCTCCTTTGCCAAAATGAGTTCTACCCAATGAGA AGGATAGGCTCCCACATTGAAATTCTGTTGTTTTCTAGAAAGATAGATAG TAGATACTTAGACGTCACTTGTAAATctccattttgaaaaataattaggc aaaactatttttagcttttcttttttgaaatattttagtcGCACAAACTT TTGAGAACAGAAACTTTCATGAggtcaaaaaatggtgaaatttaTGAGAT TTACCTTTGCGAATCTgacgaaaaaatctttttcgcaAGCAGAAGCTTGG Gtttaattttttggacctacctccgggtgccccggtggaggtcctatgaa ttaacccatgtccgttcgttcgttcgttcgttcgttcgttcgttcgttcg ttcgtccgtccgtccgtctgttaccagcttttctcaggattggctcatta gttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaagcc ggaaatatgccggaaatactggttttttggcattttctcgagattttatc attagttttttctgattttttgaacaaagatgcgtattaacaatacccaa aacatggccgagtccgatttttgagaaaaatttttttccggcggaaaatg ccggaaatatgccggaaatcgccgttttctgggttttcattgggcttttt ccttttaaatggttgttttttcattccaacacattattaatagcaatgcc caccatcaagcatgtttcaattttcaataaaattgaattttgaagccgga actatttaaaaatctccggaacaacctatattttttccggccgaaaatgc cgggaatatgccggaaaaaccggttttttgacatttcctcgaattttcat cttttgattttttgtgattttttgcagagagatgcgtattcgcaattcTC AAatcatggccgagttcgatttttgagaaaaatttcttccggtggaaaat accggaaatcgccatttttgcagattttcattgaattttttccttatatt tccaatttttttcacacaaaaacattattgacaacaatgctcaccatcaa gtaTGATTCAATTgccaataaaactgatttttgcgaccagaactttctat ttattttttccttacaaCTCTTTTCCTCtccccccccccatcaacaatca atgatgaattttttaagTTATgcattttctgactgatttttttcattttt ctcctcgcattgctatctaactctcatcatcaggtaggtccattcagcat ctagcttgttttcttTGGCATTTCATTActtacattgaattttgagtTCT AAAGATTGTCTATTTCGTCAAGAACTTTTCATGAGCGTAAACTTTAGCGA ATGAccctttcaagaattttcaaagacatttcgCAAAAAGGGCTACAATT TGCGATAATCGCGGAAATTTCTGCTTGCGAAAGAAtccacatgccaaata tctcaaaccatcttaTTACTCCTTTAATTCCTAGGTTAGAAAATACAATA CCAAAAATGTTAAATGACTATCAACCATTAAAGTATTTGATGAAAAGCTA TAGGTTGTTTTGtgattgaaataatttttataatttttatctcAATTTTC AGCGTGTAATAGGTGTATTCAAACCAAAGAACGAGGAACCTTATGGTCAT CTTAATCCGAAATGGACAAAATGGATGCATAAGACATGTTGTCCATGTTG TTTTGGTCGAAGCTGTTTACTGCCTAATCAAGGATATATGTCAGAAGCTG GAGCCAGTCTTGTTGATACAAAATTAGGACTTAATATTGTTCCAAAAACA AAGGTGAGAAGAATTTCTTATTCGTTTTTTGAGTATTGAAGTTAAGTGGa gttttcaatcattttcataCTCAAACTAGGATAAATCTTTTGATGATAAA GTTATATGAAATCTTTCTTTTCGAGTGCATCTTTGTTTTAGACTGGATTG ACACCAAATTACTCTTCTAGTTAAAATCAATTATTCTTGCAATTTTTGTA GCTTAGAAACTATAATCCTGTAAAATTTAGTAAAATGGCTCAATTAAAAT CAATATGATGGGTTATAGGGCGCAGCTTCCTAGTAATTGACCTTCAAATA AAAGCAGAAGcgaaaatgtaataaaaattctAGACTTTTTGATGTTTTCT AATATATACTTATAATAAAGGGCAAAGAGGAGCAACATACCACAAATTCC atggaacttttttcatttcttcaacGTACAGGTTGTAAGGCTGGTCAGTC CAACTTTTAATTATAATGCGTACGATCGAGCAAAAGCAAGGTCGAAACAG TTTGCAACAGAACGATTTCCTGACACTATTGGTAAACATATGAGGGCTGG ACTTCCTCCCAAGGTGAGACTTTTGTTCAAGACATAAGTTTCTTTTGGTT TTGCCCCATAATTCATCTCTGGCATATATTTATGATTTTAAAGCTGTATT CTTTCGAAGAATTTTTTTGGTTTGAGCTTTTTTCAGTAACTCCTTATTAT TTAGCTCAATCAGTGTCAATTACAGAAATTCTAAAAGTACTTTTCATTGT TCATTCACTGCTGAATTTCAAATTATGTAcacacttttctttttataata taaaaacaagttacttttagttttattcatgcaaagttttgtttttattc attCTTATTTAAGGCAACTTTCAGACTATGTAAGACATTTATAaggaggc ccggaattcccgattaaagattggtgtttttttatgaagaaaaataactc ggaaagctaaaggaagcaaaaattcccgagttaaaaaatggaaaacaacT Nataactcggaaagttaaaagaagcaaaaattccccagttaaaaaatgga aaataactcggaaagttaaagaaagccaaataaaccgagttatgaaatgt aaaatgacgtcactaaattccaaaaattacgtcataactcgggttaactc ggtttttttgtaactcggttttttaactcggaaaaaataactcgggaatt ccgggcctcatTTATAAGCTAGCCTCAAAAATTTATGTCCTGAGCTTTTT ATTAAAGCCTCTTTTTAAATGCAGAttattcttcaaattttattttcaat tacgGCCAAAATTGAGCTTTGTAAAATTATCCTTACAGAAAGCAGGCATC TATGTCTTGGTTGACACAAAAATTCACGAAAGACGTTTTATTATTGTTAC TacatgaaattcaaaaaattcactTCTATTATTTATAGATTGGTTCATTT CAACTCTTCGTAGAAGGCTATAAAGACGCCGAATATTATCTGAAGAAGTT CGAAACACAACCCTTAGGCGATGAAACGTTAAAAGAATTTCAATTACAAT TCGAAAAATTAGTCTGTCTAGATTATATAACACGAAACACAGGTACGAAG ATTTGCTGTTTTTTCTCACTCTcgctttttgaatttgaaagtaACCACAT TTTCTCTAGACGTCAATTCCTCGCTTTTTAAGTTCAATAGGAATATAGTA TTGCTCCCGTTTTCACTCATCAAGCTAGAACGAGAACATGCAGAAAGAAT TTAACAGTTAAGACCTTTatttattattcaaatttcaTGCATTTTGTCTC GATATTAATGGTAGCAATACTTAAGTTCAATAtataagtgtttttttttt gagacgATAACAATTAATAGTTTGAGTGTTTATAAATCTTCTCTTTTAGA TCGCGGCAATGACAATTGGCTGATACGATATGAAGCGGCGCCCGTAGTGG AAGGGAGTACGGCCTGTCTCGAACATGAACGAGTTTCTATATGTGAGGTA AGTGGTATGAACGACTTCTTTCTTTATTTCTGTGCTTTGCTTAAGCTTTT CTTGATGATACCTTTAGGCTCACTAATTTCCAAAGTCGAATTGTGACAAT TTGAATGGTACTCACATGGTACTTTTTAAAGGATgtttgaaatttcaagt tataCTTAAAGTTATAAAGTTCTGAGATTTTAGTTCTTTTGTCAAAAAGC CCTAAAATGTTTATGTTCAGTTTTCCAATGAAGAaataatcttttctttt ttgacagcAAAACGAAGGCGAGTCATGCGATGAGGCAGAGAACTGGAGTA TCGTTGGAAAACCCAAAATCTACATCGCTGCCATCGATAATGGTCTTTCA TTCCCTTTCAAACATCCCGACTCTTGGAGGTTATGTAAGTGTATACTGAA TTAGCTATGAGTTCATTTATGAAACtgttatgaatttattttagAACTTA ATTCAGGCTGGGTGGTAGATCCTTGTCGACCTTTTAACACGAAACTTTTC TTATcaatttctttattattttgtcTTAGATCCATATCATTGGGCATGGT TACCATACGCCAAAGTCCCTTTCTCTGACGATATCAGGGAGATGATACTA CCACTTCTCTCCGATCTCAATTTCGTACAAAGTCTCATCGAAGATTTATT CGAGTTATTTGctgtaagtattttttttcacccTCAGCGTATAACTATAA GTCGTATGAAAGAGCACTGCTtgcaatttaattttaaaatcaacaatttt ccaaaaatcaatttCGAGAATAGGCCCTGTAAACAACTTCATATCATACA TTATTGGTTTTAAAAGCTTGATTAAAATTATCAACTCGACTTCaatcttt tactttttcagGAAGACAAAGGGTTCGATAATGGAAATTTCGATAAACAA ATGTCAGTCATGAGAGGACAGGTAAGAAAAAACTCTTCGAAATTTATAGC GGGTATCTCTTTTTTATACTCACTGACAGAAGTTAAGAATAAATCTGCTG TAATATTTCAACTCGAGTCACTATGAACTAATATTAGAGTCAACCCCCTC CCCCGATCCCATGAAAGGGGGAATAGTGACATTTCCTgcaattcaataaa atttaccctattatgaaaagcaatttttcaatctttttaagATTCTGAAC CTTACACAAGCATTGAAGGACAAGAAGACACCTGCGCAACTTGTTCAAAT GCCACCAGTTTATGTACAAAGGAGGAGGACAAATAGTGATGTCCGAGATG GGCGTGGTCATAGTTTTGTACAGAGTTTCCACGACAAGATACCGTTCTTC TCATGGTGTTGATATGTTTGGGAGAATGTTTGTTTTCTGATGCTGAATGA AGTGTGGTGTATTTctggtgaaaaagaaaatcctGCTTCAAGCCCCTACA AAACCTTTTTACATGGGAGAGTTTGGTTTTATTGGGTCTGTCTTATTATG TTTTTGGGGTTTAGACTACTTAGAAATGAGAAAAAGGTGTAATTGGCCCT TCTCCTTCCTGAGTAGGGATTTTTTGACACGTTCATGACCTTGCTGACAT CCATGAGCTTCCTGGCTCGCTCGACAAAGGAACTAAATACATCAGAAGAC CCTTCAACCCTTATATAGTGTAGAATTTACCAGATAGTATGAATATCGTT ACATTGAATTTCTCTTAAAcacagaattttgacgttttttctCTTCGGTA AATTTGATCCAGTCCATTTGTGGCATTTGTGATAGGtgtataaaaaaaaa gtagttaaactaaatattttgaattttaaaatcctTAATCGGATTTGGGC TTCTTGTTAAggatttttttttagatatttttaccaattttttcgttttt ggATTGTTCAGTTGGGATATTTTGTCCATCCTAAAGGTGTTATTGCCTGG CTATAATTTTCTCTACTTAAGTACCATGGTGATGATTAACTGATTTGAGC CCAACTCTTTTAATAATACAAATCGAAATAATATGACTGGAAGATCTTCT AGACATACTCGTTTCTTGAAGTCTTCACTCGTTTTGGTTTGTCAATTGGT GACTGAAGTCCTTATATTTTTAGTgcattttgtgacttttttgtttattt tgcttaTAATAGTTATTCTTTTGGGATAGCTTAAAACAAATTTAAGTTAT TTtacaagattttaaaattcagataatatttttttttcgatgaagaaaat tataaaaaaattcaacgTAATGAATTGTTCTATTTTCCATTCACGAGTAT TCCAAGTCATTCGTCATCCTTAGATAAACTTACACGACAGATGCTTGTAA TTTCTACTTCAGTTACAGTCCATTCACTTCTCAAAGGAAACCAATTTTGA GTACAAATAGCATAACACCTAAAACCGCCATCAAGCACTTGTTACTCTTC ACAGCATTTCCACTATTATAAGTTTTCTTCGATGAGAGCGCGTACCAGAG CGCTTTTTCATCGCTTTCTTCGTTACATAAATTTCCTCTACAGCATGATT cc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069870TCONS_00069870Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069870-proteinTCONS_00069870-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_511supercontigscaffold_511:87463..98614 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PI4K2Aphosphatidylinositol 4-kinase type 2-alpha Homo Sapiens
PI4K2Bphosphatidylinositol 4-kinase type 2-beta Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
18.23 18.87 21.48 19.77 38.64 29.77 42.37 47.63 35.04 43.17 33.74 27.9 40.95 36.38 31.93 37.17 30.68 31.72 28.31 29.79 25.88 27.01 28.55 29.35 31.87 34.36 41.66 35.81 26.88 28